Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.15G049800 Manihot esculenta HOM05D006670 ORTHO05D008715 5.3e-151 537.7 282 100.0
Manes.03G154700 Manihot esculenta HOM05D006670 ORTHO05D008715 3.5e-131 471.9 275 90.5
Potri.003G174400 Populus trichocarpa HOM05D006670 ORTHO05D008715 2.1e-123 446.0 270 85.6
Haze_11539 Corylus avellana HOM05D006670 ORTHO05D008715 4.3e-121 438.3 281 80.1
Sabra03G0127900 Salix brachista HOM05D006670 ORTHO05D008715 4.3e-121 438.3 270 83.7
Cfa014868 Carpinus fangiana HOM05D006670 ORTHO05D008715 4.8e-120 434.9 281 79.4
Ciclev10005609m.g Citrus clementina HOM05D006670 ORTHO05D008715 1.7e-117 426.4 276 79.0
Dinv27152 Davidia involucrata HOM05D006670 ORTHO05D008715 3.2e-116 422.2 266 80.5
QL06p022765 Quercus lobata HOM05D006670 ORTHO05D008715 5.5e-116 421.4 265 81.5
CiPaw.01G205600 Carya illinoinensis HOM05D006670 ORTHO05D008715 8.8e-114 414.1 264 80.7
CANSAT78G1187 Cannabis sativa HOM05D006670 ORTHO05D008715 2.0e-113 412.9 278 75.2
Prupe.1G056900 Prunus persica HOM05D006670 ORTHO05D008715 2.5e-113 412.5 266 78.9
Thecc.04G214700 Theobroma cacao HOM05D006670 ORTHO05D008715 9.7e-113 410.6 275 75.3
MELO3C006346.2 Cucumis melo HOM05D006670 ORTHO05D008715 2.2e-112 409.5 269 77.3
ClCG05G003670 Citrullus lanatus HOM05D006670 ORTHO05D008715 3.7e-112 408.7 282 75.5
FAN12G2738 Fragaria x ananassa HOM05D006670 ORTHO05D008715 3.7e-112 408.7 266 77.1
COL.COLO4_05724 Corchorus olitorius HOM05D006670 ORTHO05D008715 4.8e-112 408.3 275 75.6
RcHm_v2.0_Chr4g0396631 Rosa chinensis HOM05D006670 ORTHO05D008715 4.8e-112 408.3 266 77.1
TAR636G1307 Trochodendron aralioides HOM05D006670 ORTHO05D008715 6.3e-112 407.9 270 76.3
CsaV3_3G011380 Cucumis sativus L. HOM05D006670 ORTHO05D008715 8.2e-112 407.5 270 77.0
FvH4_4g05510 Fragaria vesca HOM05D006670 ORTHO05D008715 1.1e-111 407.1 266 77.1
FAN22G1637 Fragaria x ananassa HOM05D006670 ORTHO05D008715 1.1e-111 407.1 266 76.7
PGR083G1840 Punica granatum HOM05D006670 ORTHO05D008715 1.8e-111 406.4 265 77.0
CSS0047689 Camellia sinensis var. sinensis HOM05D006670 ORTHO05D008715 3.1e-111 405.6 267 76.8
Aqoxy2G03824 Aquilegia oxysepala HOM05D006670 ORTHO05D008715 4.1e-111 405.2 266 76.3
CSS0048127 Camellia sinensis var. sinensis HOM05D006670 ORTHO05D008715 2.6e-110 402.5 267 76.0
Rhsim09G0046600 Rhododendron simsii HOM05D006670 ORTHO05D008715 7.7e-110 401.0 264 77.3
FAN07G0632 Fragaria x ananassa HOM05D006670 ORTHO05D008715 1.3e-109 400.2 266 75.9
HanXRQChr01g0022661 Helianthus annuus HOM05D006670 ORTHO05D008715 3.8e-109 398.7 265 74.7
Sed0004390 Sechium edule HOM05D006670 ORTHO05D008715 3.8e-109 398.7 270 75.9
Duzib212G0230 Durio zibethinus HOM05D006670 ORTHO05D008715 5.0e-109 398.3 269 74.7
PSO063G6527 Papaver somniferum HOM05D006670 ORTHO05D008715 6.5e-109 397.9 271 73.4
MBI10_g16834_MAGBIO Magnolia biondii HOM05D006670 ORTHO05D008715 1.4e-108 396.7 264 74.6
MD13G1229700 Malus domestica HOM05D006670 ORTHO05D008715 3.2e-108 395.6 266 76.3
PSO017G1158 Papaver somniferum HOM05D006670 ORTHO05D008715 4.2e-108 395.2 271 72.7
Rhsim09G0047600 Rhododendron simsii HOM05D006670 ORTHO05D008715 4.2e-108 395.2 264 75.0
Lsat_1_v5_gn_0_4721 Lactuca sativa HOM05D006670 ORTHO05D008715 1.2e-107 393.7 265 74.0
BcaB06g26594 Brassica carinata HOM05D006670 ORTHO05D008715 2.1e-107 392.9 268 72.0
Cpa.g.sc59.72 Carica papaya HOM05D006670 ORTHO05D008715 1.4e-106 390.2 266 75.6
ECA248G0542 Erigeron canadensis HOM05D006670 ORTHO05D008715 1.4e-106 390.2 263 73.4
Gorai.011G163000 Gossypium raimondii HOM05D006670 ORTHO05D008715 1.4e-106 390.2 270 73.0
Gohir.D10G145900 Gossypium hirsutum HOM05D006670 ORTHO05D008715 3.9e-106 388.7 270 72.6
Carub.0003s2449 Capsella rubella HOM05D006670 ORTHO05D008715 6.7e-106 387.9 269 71.0
Sc13g0002920 Simmondsia chinensis HOM05D006670 ORTHO05D008715 8.8e-106 387.5 259 76.1
CARHR100200 Cardamine hirsuta HOM05D006670 ORTHO05D008715 2.0e-105 386.3 278 69.4
A07p08240 Brassica napus HOM05D006670 ORTHO05D008715 3.3e-105 385.6 269 71.4
Gohir.A10G120500 Gossypium hirsutum HOM05D006670 ORTHO05D008715 4.4e-105 385.2 270 71.9
Hund24851 Selenicereus undatus HOM05D006670 ORTHO05D008715 5.7e-105 384.8 275 70.5
vmacro00519 Vaccinium macrocarpon HOM05D006670 ORTHO05D008715 7.4e-105 384.4 324 63.9
AL3G39350 Arabidopsis lyrata HOM05D006670 ORTHO05D008715 1.3e-104 383.6 269 70.3
BolC7t41764H Brassica oleracea HOM05D006670 ORTHO05D008715 2.8e-104 382.5 269 71.0
Thhalv10002635m.g Eutrema salsugineum HOM05D006670 ORTHO05D008715 3.7e-104 382.1 276 68.8
Sp3g21930 Schrenkiella parvula HOM05D006670 ORTHO05D008715 3.7e-104 382.1 267 70.8
arahy.Tifrunner.gnm1.ann1.CI907D Arachis hypogaea HOM05D006670 ORTHO05D008715 8.2e-104 380.9 271 72.0
BraA07t28607Z Brassica rapa HOM05D006670 ORTHO05D008715 8.2e-104 380.9 269 70.3
Glyma.10G127400 Glycine max HOM05D006670 ORTHO05D008715 1.1e-103 380.6 277 70.4
arahy.Tifrunner.gnm1.ann1.M1QCRY Arachis hypogaea HOM05D006670 ORTHO05D008715 1.8e-103 379.8 271 72.0
DCAR_024309 Daucus carota HOM05D006670 ORTHO05D008715 1.8e-103 379.8 267 73.0
Lalb_Chr01g0011161 Lupinus albus HOM05D006670 ORTHO05D008715 3.1e-103 379.0 267 73.8
Phvul.007G238000 Phaseolus vulgaris HOM05D006670 ORTHO05D008715 4.1e-103 378.6 271 71.2
Atru.chr4.1814 Acer truncatum HOM05D006670 ORTHO05D008715 7.0e-103 377.9 274 72.6
BcaC06g35628 Brassica carinata HOM05D006670 ORTHO05D008715 9.1e-103 377.5 269 69.9
C07p12780 Brassica napus HOM05D006670 ORTHO05D008715 9.1e-103 377.5 269 69.9
Lju414A3G25 Lonicera japonica HOM05D006670 ORTHO05D008715 1.5e-102 376.7 239 80.8
AUR62035321 Chenopodium quinoa HOM05D006670 ORTHO05D008715 2.0e-102 376.3 276 68.8
AT3G24030 Arabidopsis thaliana HOM05D006670 ORTHO05D008715 2.6e-102 375.9 269 68.8
AUR62035928 Chenopodium quinoa HOM05D006670 ORTHO05D008715 4.5e-102 375.2 276 68.8
VMungo0720G2028 Vigna mungo HOM05D006670 ORTHO05D008715 4.5e-102 375.2 273 70.3
Actinidia25088 Actinidia chinensis HOM05D006670 ORTHO05D008715 5.9e-102 374.8 243 79.8
Ca_11808_v3 Cicer arietinum L. HOM05D006670 ORTHO05D008715 7.7e-102 374.4 270 72.6
Eucgr.H02870 Eucalyptus grandis HOM05D006670 ORTHO05D008715 7.7e-102 374.4 268 72.8
TPR.G11296 Trifolium pratense HOM05D006670 ORTHO05D008715 1.7e-101 373.2 272 71.3
Ah.04g153360 Amaranthus hybridus HOM05D006670 ORTHO05D008715 2.9e-101 372.5 281 68.3
THA.LOC104808732 Tarenaya hassleriana HOM05D006670 ORTHO05D008715 5.0e-101 371.7 262 71.8
ATR0787G198 Amborella trichopoda HOM05D006670 ORTHO05D008715 6.5e-101 371.3 277 67.5
Medtr1g046510 Medicago truncatula HOM05D006670 ORTHO05D008715 1.1e-100 370.5 279 69.5
Psat6g047400 Pisum sativum HOM05D006670 ORTHO05D008715 1.1e-100 370.5 268 71.3
Sopen05g031980 Solanum pennellii HOM05D006670 ORTHO05D008715 4.2e-100 368.6 269 71.0
Medtr1g046790 Medicago truncatula HOM05D006670 ORTHO05D008715 9.4e-100 367.5 270 70.7
Lj6g0025132 Lotus japonicus HOM05D006670 ORTHO05D008715 1.5e-97 360.1 272 68.4
Peaxi162Scf00536g00711 Petunia axillaris HOM05D006670 ORTHO05D008715 7.4e-97 357.8 265 69.8
MSTRG.4202 Avicennia marina HOM05D006670 ORTHO05D008715 1.8e-95 353.2 270 68.1
SGA_v2.0_scaffold57G20164 Striga asiatica HOM05D006670 ORTHO05D008715 9.1e-95 350.9 267 67.4
Nn3g19866 Nelumbo nucifera HOM05D006670 ORTHO05D008715 1.2e-94 350.5 232 76.3
GSVIVG01029032001 Vitis vinifera HOM05D006670 ORTHO05D008715 1.7e-93 346.7 223 79.4
Migut.G00614 Erythranthe guttata HOM05D006670 ORTHO05D008715 8.5e-93 344.4 268 66.4
SHI00002 Sapria himalayana HOM05D006670 ORTHO05D008715 4.7e-91 338.6 288 64.2
Nitab4.5_0001769g0060 Nicotiana tabacum HOM05D006670 ORTHO05D008715 3.0e-90 335.9 267 64.8
SEGI_39672 Sequoiadendron giganteum HOM05D006670 ORTHO05D008715 4.0e-90 335.5 269 62.8
Nitab4.5_0012036g0010 Nicotiana tabacum HOM05D006670 ORTHO05D008715 5.2e-90 335.1 267 65.2
Zm00001eb341310 Zea mays HOM05D006670 ORTHO05D008715 4.4e-89 332.0 276 62.3
PGSC0003DMG400027217 Solanum tuberosum HOM05D006670 ORTHO05D008715 5.7e-89 331.6 241 71.4
Cc03_g07080 Coffea canephora HOM05D006670 ORTHO05D008715 1.8e-87 326.6 225 73.3
Mapoly0087s0052 Marchantia polymorpha HOM05D006670 ORTHO05D008715 5.4e-87 325.1 269 61.0
AagrBONN_evm.TU.Sc2ySwM_228.2900 Anthoceros agrestis HOM05D006670 ORTHO05D008715 2.2e-85 319.7 260 61.2
Pp3c9_10780 Physcomitrium patens HOM05D006670 ORTHO05D008715 8.5e-85 317.8 269 58.7
SMO137G0262 Selaginella moellendorffii HOM05D006670 ORTHO05D008715 2.5e-84 316.2 262 63.4
Oeu022324.1 Olea europaea HOM05D006670 ORTHO05D008715 3.2e-84 315.8 241 69.3
CDE01G0405 Ceratophyllum demersum HOM05D007853 ORTHO05D009873 9.4e-84 314.3 232 68.5
unitig_747.g21700 Utricularia gibba HOM05D006670 ORTHO05D008715 8.3e-80 301.2 391 45.0
RhsimUnG0181700 Rhododendron simsii HOM05D006670 ORTHO05D008715 5.4e-79 298.5 264 60.6
SMO134G0250 Selaginella moellendorffii HOM05D006670 ORTHO05D008715 1.3e-72 277.3 268 56.7
EL10Ac3g06772 Beta vulgaris HOM05D006670 ORTHO05D008715 3.5e-70 269.2 231 60.2
Cre06.g255350 Chlamydomonas reinhardtii HOM05D006670 ORTHO05D008715 8.9e-66 254.6 267 52.1
Dinv44414 Davidia involucrata HOM05D006670 ORTHO05D008715 1.3e-61 240.7 148 82.4
Psat7g020640 Pisum sativum HOM05D006670 ORTHO05D008715 3.4e-57 226.1 183 67.8
Psat4g139560 Pisum sativum HOM05D006670 ORTHO05D000720 2.7e-54 216.5 220 55.9
Lju414A3G24 Lonicera japonica HOM05D006670 ORTHO05D008715 4.7e-51 205.7 181 64.6
Rhsim09G0047300 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.7e-51 205.7 138 71.7
Potri.001G053900 Populus trichocarpa HOM05D006670 ORTHO05D008715 5.4e-47 192.2 122 84.4
CAN.G305.17 Capsicum annuum HOM05D006670 ORTHO05D008715 7.1e-47 191.8 150 62.0
Psat0s5229g0080 Pisum sativum HOM05D006670 ORTHO05D006513 9.2e-47 191.4 217 50.7
Os01g0363600 Oryza sativa ssp. japonica HOM05D006670 ORTHO05D008715 5.2e-42 175.6 136 59.6
CAN.G305.16 Capsicum annuum HOM05D006670 ORTHO05D008715 8.9e-42 174.9 139 68.3
Psat4g139640 Pisum sativum HOM05D006670 ORTHO05D002176 9.6e-36 154.8 146 61.6
Sabra01G0038200 Salix brachista HOM05D006670 ORTHO05D349611 4.8e-35 152.5 206 49.5
Lsat_1_v5_gn_5_180420 Lactuca sativa HOM05D006670 ORTHO05D008715 9.3e-31 138.3 116 62.9
Migut.G00612 Erythranthe guttata HOM05D006670 ORTHO05D008715 4.8e-27 125.9 128 59.4
PGSC0003DMG402027165 Solanum tuberosum HOM05D006670 ORTHO05D008715 4.9e-24 115.9 81 74.1
FAN17G2931 Fragaria x ananassa HOM05D006670 ORTHO05D008715 6.0e-22 109.0 80 72.5
Cfa024720 Carpinus fangiana HOM05D005536 ORTHO05D006999 1.0e-21 108.2 256 32.8
Cpa.g.sc59.70 Carica papaya HOM05D006670 ORTHO05D119377 1.6e-11 74.3 108 42.6
Psat5g196680 Pisum sativum HOM05D006670 ORTHO05D008715 4.1e-10 69.7 48 66.7


User provided reference genes

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