Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.15G049600 Manihot esculenta HOM05D007635 ORTHO05D009612 1.6e-92 342.8 182 100.0
Potri.001G053700 Populus trichocarpa HOM05D007635 ORTHO05D009612 8.6e-46 187.6 183 55.7
Ciclev10006014m.g Citrus clementina HOM05D007635 ORTHO05D009612 4.4e-42 175.3 187 54.5
Dinv26633 Davidia involucrata HOM05D007635 ORTHO05D009612 5.8e-42 174.9 95 89.5
Prupe.7G097800 Prunus persica HOM05D007635 ORTHO05D009612 1.7e-41 173.3 96 88.5
Gorai.011G162800 Gossypium raimondii HOM05D007635 ORTHO05D009612 2.9e-41 172.6 188 56.4
Eucgr.K02034 Eucalyptus grandis HOM05D007635 ORTHO05D009612 6.4e-41 171.4 97 87.6
Duzib268G0659 Durio zibethinus HOM05D007635 ORTHO05D009612 1.1e-40 170.6 97 86.6
Eucgr.L01778 Eucalyptus grandis HOM05D007635 ORTHO05D009612 1.4e-40 170.2 97 86.6
QL07p037425 Quercus lobata HOM05D007635 ORTHO05D009612 1.4e-40 170.2 181 53.0
RcHm_v2.0_Chr3g0475481 Rosa chinensis HOM05D007635 ORTHO05D009612 1.9e-40 169.9 130 70.8
FAN05G0948 Fragaria x ananassa HOM05D007635 ORTHO05D009612 2.4e-40 169.5 174 55.7
CiPaw.09G019400 Carya illinoinensis HOM05D007635 ORTHO05D009612 7.1e-40 167.9 94 85.1
Aa31LG5G4080 Aethionema arabicum HOM05D007635 ORTHO05D009612 9.2e-40 167.5 132 64.4
PGR142G1826 Punica granatum HOM05D007635 ORTHO05D009612 9.2e-40 167.5 97 82.5
Lj1g0026019 Lotus japonicus HOM05D007635 ORTHO05D009612 1.6e-39 166.8 175 54.3
Ah.05g169970 Amaranthus hybridus HOM05D007635 ORTHO05D009612 2.7e-39 166.0 95 86.3
Nn1g07615 Nelumbo nucifera HOM05D007635 ORTHO05D009612 4.6e-39 165.2 95 85.3
Cc05_g09950 Coffea canephora HOM05D007635 ORTHO05D009612 6.0e-39 164.9 175 54.9
FvH4_6g20030 Fragaria vesca HOM05D007635 ORTHO05D009612 7.8e-39 164.5 174 54.6
FAN14G1263 Fragaria x ananassa HOM05D007635 ORTHO05D009612 7.8e-39 164.5 174 54.6
GSVIVG01030149001 Vitis vinifera HOM05D007635 ORTHO05D009612 7.8e-39 164.5 114 71.1
TAR374G1245 Trochodendron aralioides HOM05D007635 ORTHO05D009612 1.0e-38 164.1 95 82.1
Lalb_Chr20g0111441 Lupinus albus HOM05D007635 ORTHO05D009612 1.7e-38 163.3 94 83.0
CSS0021722 Camellia sinensis var. sinensis HOM05D007635 ORTHO05D009612 2.3e-38 162.9 95 83.2
CSS0041027 Camellia sinensis var. sinensis HOM05D007635 ORTHO05D009612 2.3e-38 162.9 95 83.2
FAN02G0889 Fragaria x ananassa HOM05D007635 ORTHO05D009612 3.9e-38 162.2 174 54.0
FAN09G2965 Fragaria x ananassa HOM05D007635 ORTHO05D009612 3.9e-38 162.2 143 62.9
PSO541G5044 Papaver somniferum HOM05D007635 ORTHO05D009612 3.9e-38 162.2 93 81.7
PSO675G5663 Papaver somniferum HOM05D007635 ORTHO05D009612 3.9e-38 162.2 93 81.7
Haze_19686 Corylus avellana HOM05D007635 ORTHO05D009612 5.1e-38 161.8 139 63.3
arahy.Tifrunner.gnm1.ann1.X3I9NV Arachis hypogaea HOM05D007635 ORTHO05D009612 6.6e-38 161.4 94 81.9
Actinidia12337 Actinidia chinensis HOM05D007635 ORTHO05D009612 8.6e-38 161.0 121 69.4
Cfa016671 Carpinus fangiana HOM05D003127 ORTHO05D003709 1.1e-37 160.6 94 81.9
Nitab4.5_0000923g0190 Nicotiana tabacum HOM05D007635 ORTHO05D009612 1.1e-37 160.6 95 81.1
COL.COLO4_05721 Corchorus olitorius HOM05D001044 ORTHO05D007204 1.5e-37 160.2 97 83.5
Glyma.03G200700 Glycine max HOM05D007635 ORTHO05D009612 1.9e-37 159.8 157 55.4
Glyma.19G198300 Glycine max HOM05D007635 ORTHO05D009612 1.9e-37 159.8 94 81.9
Phvul.001G194300 Phaseolus vulgaris HOM05D007635 ORTHO05D009612 1.9e-37 159.8 94 80.9
Sc26g0000090 Simmondsia chinensis HOM05D007635 ORTHO05D009612 1.9e-37 159.8 133 61.7
CAN.G904.10 Capsicum annuum HOM05D007635 ORTHO05D009612 3.3e-37 159.1 95 80.0
Ca_09045_v3 Cicer arietinum L. HOM05D007635 ORTHO05D009612 3.3e-37 159.1 94 80.9
unitig_26.g8994 Utricularia gibba HOM05D007635 ORTHO05D009612 3.3e-37 159.1 93 82.8
MSTRG.12845 Avicennia marina HOM05D007635 ORTHO05D009612 4.3e-37 158.7 92 84.8
CANSAT64G1146 Cannabis sativa HOM05D007635 ORTHO05D009612 4.3e-37 158.7 96 80.2
ATR0751G143 Amborella trichopoda HOM05D007635 ORTHO05D009612 7.3e-37 157.9 143 59.4
Lsat_1_v5_gn_7_99401 Lactuca sativa HOM05D007635 ORTHO05D009612 1.2e-36 157.1 92 83.7
Solyc10g007670.4 Solanum lycopersicum HOM05D007635 ORTHO05D009612 1.2e-36 157.1 95 78.9
PGSC0003DMG400021288 Solanum tuberosum HOM05D007635 ORTHO05D009612 1.2e-36 157.1 95 78.9
VMungo1383G2560 Vigna mungo HOM05D007635 ORTHO05D009612 1.2e-36 157.1 94 78.7
AL4G28740 Arabidopsis lyrata HOM05D007635 ORTHO05D009612 1.6e-36 156.8 97 77.3
AL569U10010 Arabidopsis lyrata HOM05D007635 ORTHO05D009612 1.6e-36 156.8 97 77.3
BcaB06g28657 Brassica carinata HOM05D007635 ORTHO05D009612 1.6e-36 156.8 97 78.4
A04p25480 Brassica napus HOM05D007635 ORTHO05D009612 1.6e-36 156.8 97 78.4
BraA04t18051Z Brassica rapa HOM05D007635 ORTHO05D009612 1.6e-36 156.8 97 78.4
CARHR127160 Cardamine hirsuta HOM05D007635 ORTHO05D009612 1.6e-36 156.8 95 80.0
Sp4g15480 Schrenkiella parvula HOM05D007635 ORTHO05D009612 1.6e-36 156.8 97 78.4
Sopen10g003580 Solanum pennellii HOM05D007635 ORTHO05D009612 1.6e-36 156.8 137 62.0
BcaC02g07856 Brassica carinata HOM05D007635 ORTHO05D009612 2.1e-36 156.4 97 77.3
BolC4t27744H Brassica oleracea HOM05D007635 ORTHO05D009612 2.1e-36 156.4 97 77.3
Thhalv10017331m.g Eutrema salsugineum HOM05D007635 ORTHO05D009612 2.8e-36 156.0 97 76.3
Peaxi162Scf00035g02213 Petunia axillaris HOM05D007635 ORTHO05D009612 2.8e-36 156.0 95 77.9
Medtr7g105840 Medicago truncatula HOM05D007635 ORTHO05D009612 4.7e-36 155.2 94 79.8
C04p62620 Brassica napus HOM05D007635 ORTHO05D009612 6.2e-36 154.8 97 77.3
AT2G33180 Arabidopsis thaliana HOM05D007635 ORTHO05D009612 8.1e-36 154.5 134 61.2
AUR62027757 Chenopodium quinoa HOM05D007635 ORTHO05D009612 8.1e-36 154.5 95 78.9
AUR62038521 Chenopodium quinoa HOM05D007635 ORTHO05D009612 8.1e-36 154.5 95 78.9
Rhsim06G0182000 Rhododendron simsii HOM05D007635 ORTHO05D009612 8.1e-36 154.5 186 51.6
Rhsim06G0183000 Rhododendron simsii HOM05D007635 ORTHO05D009612 8.1e-36 154.5 186 51.6
SEGI_23489 Sequoiadendron giganteum HOM05D007635 ORTHO05D009612 8.1e-36 154.5 119 65.5
Carub.0004s1461 Capsella rubella HOM05D007635 ORTHO05D009612 1.4e-35 153.7 97 75.3
ECA236G3620 Erigeron canadensis HOM05D007635 ORTHO05D009612 1.8e-35 153.3 93 81.7
MBI15_g36010_MAGBIO Magnolia biondii HOM05D007635 ORTHO05D009612 1.2e-34 150.6 95 78.9
MBI15_g47427_MAGBIO Magnolia biondii HOM05D007635 ORTHO05D009612 1.2e-34 150.6 95 78.9
TWI09G0209 Tripterygium wilfordii HOM05D007635 ORTHO05D009612 1.2e-34 150.6 155 56.1
TPR.G23321 Trifolium pratense HOM05D007635 ORTHO05D009612 3.4e-34 149.1 159 53.5
CsaV3_3G037770 Cucumis sativus L. HOM05D007635 ORTHO05D009612 5.8e-34 148.3 93 76.3
Psat3g030120 Pisum sativum HOM05D003127 ORTHO05D003709 9.9e-34 147.5 93 76.3
vmacro12032 Vaccinium macrocarpon HOM05D007635 ORTHO05D009612 1.3e-33 147.1 112 70.5
Zm00001eb101710 Zea mays HOM05D007635 ORTHO05D009612 2.2e-33 146.4 92 75.0
ClCG10G018500 Citrullus lanatus HOM05D003127 ORTHO05D003709 2.9e-33 146.0 93 75.3
Os09g0481800 Oryza sativa ssp. japonica HOM05D007635 ORTHO05D009612 3.8e-33 145.6 92 73.9
CBR_g50773 Chara braunii HOM05D007635 ORTHO05D009612 8.4e-33 144.4 97 73.2
SGA_v2.0_scaffold130G34228 Striga asiatica HOM05D007635 ORTHO05D009612 1.1e-32 144.1 105 73.3
MD12G1037400 Malus domestica HOM05D007635 ORTHO05D009612 2.3e-30 136.3 141 56.0
Atru.BG.99.p Acer truncatum HOM05D007635 ORTHO05D009612 6.6e-30 134.8 71 91.5
EL10Ac1g01217 Beta vulgaris HOM05D007635 ORTHO05D009612 8.6e-30 134.4 80 81.2
Pp3c11_15670 Physcomitrium patens HOM05D007635 ORTHO05D009612 1.9e-29 133.3 93 69.9
AagrBONN_evm.TU.Sc2ySwM_362.2476 Anthoceros agrestis HOM05D007635 ORTHO05D009612 9.6e-29 131.0 93 68.8
Cpa.g.sc59.77 Carica papaya HOM05D007635 ORTHO05D009612 1.6e-28 130.2 89 74.2
Aqoxy2G03911 Aquilegia oxysepala HOM05D007635 ORTHO05D009612 2.0e-26 123.2 75 77.3
Nitab4.5_0002209g0110 Nicotiana tabacum HOM05D007635 ORTHO05D009612 4.4e-26 122.1 93 66.7
HanXRQChr11g0329581 Helianthus annuus HOM05D007635 ORTHO05D009612 5.8e-26 121.7 64 92.2
FAN05G1739 Fragaria x ananassa HOM05D007635 ORTHO05D009612 1.3e-22 110.5 62 85.5
HPP92_017857 Vanilla planifolia HOM05D007635 ORTHO05D009612 2.3e-22 109.8 63 81.0
MELO3C009519.2 Cucumis melo HOM05D003127 ORTHO05D003709 4.3e-21 105.5 63 79.4
Sed0019283 Sechium edule HOM05D003127 ORTHO05D003709 9.6e-21 104.4 63 76.2
Migut.H02083 Erythranthe guttata HOM05D007635 ORTHO05D009612 4.0e-19 99.0 107 51.4
Pp3c11_15610 Physcomitrium patens HOM05D007635 ORTHO05D009612 3.8e-17 92.4 70 62.9
Gohir.A10G120700 Gossypium hirsutum HOM05D007635 ORTHO05D009612 1.3e-09 67.4 129 41.1
Thecc.04G214500 Theobroma cacao HOM05D007635 ORTHO05D009612 1.1e-08 64.3 38 81.6
Gohir.D10G145600 Gossypium hirsutum HOM05D007635 ORTHO05D009612 3.5e-07 59.3 83 47.0


User provided reference genes

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