Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.15G049200 Manihot esculenta HOM05D008849 ORTHO05D010556 2.6e-76 288.5 134 100.0
CiPaw.01G204700 Carya illinoinensis HOM05D008849 ORTHO05D010556 1.1e-21 107.1 116 38.8
Atru.chr4.1805 Acer truncatum HOM05D008849 ORTHO05D010556 2.4e-21 105.9 124 39.5
Potri.003G175000 Populus trichocarpa HOM05D008849 ORTHO05D010556 1.2e-20 103.6 122 41.8
Sabra03G0128300 Salix brachista HOM05D008849 ORTHO05D010556 6.0e-20 101.3 126 39.7
Potri.001G053200 Populus trichocarpa HOM05D008849 ORTHO05D010556 3.9e-19 98.6 122 37.7
RcHm_v2.0_Chr4g0396831 Rosa chinensis HOM05D008849 ORTHO05D010556 1.5e-18 96.7 103 40.8
RcHm_v2.0_Chr4g0396821 Rosa chinensis HOM05D008849 ORTHO05D010556 1.9e-18 96.3 104 38.5
CiPaw.02G127100 Carya illinoinensis HOM05D008849 ORTHO05D010556 3.3e-18 95.5 129 37.2
FvH4_4g05650 Fragaria vesca HOM05D008849 ORTHO05D010556 3.3e-18 95.5 103 38.8
Ciclev10007007m.g Citrus clementina HOM05D008849 ORTHO05D010556 4.3e-18 95.1 106 41.5
CiPaw.16G074900 Carya illinoinensis HOM05D008849 ORTHO05D010556 5.6e-18 94.7 129 34.9
FAN17G1524 Fragaria x ananassa HOM05D008849 ORTHO05D010556 1.2e-17 93.6 103 38.8
QL11p022534 Quercus lobata HOM05D008849 ORTHO05D010556 1.2e-17 93.6 103 35.9
Potri.003G175100 Populus trichocarpa HOM05D008849 ORTHO05D010556 1.6e-17 93.2 103 40.8
Thecc.04G213000 Theobroma cacao HOM05D008849 ORTHO05D010556 2.8e-17 92.4 124 37.9
COL.COLO4_26204 Corchorus olitorius HOM05D008849 ORTHO05D010556 6.2e-17 91.3 104 37.5
Gohir.A09G202100 Gossypium hirsutum HOM05D008849 ORTHO05D010556 6.2e-17 91.3 103 40.8
Gohir.D09G196100 Gossypium hirsutum HOM05D008849 ORTHO05D010556 1.1e-16 90.5 103 40.8
Gorai.006G219500 Gossypium raimondii HOM05D008849 ORTHO05D010556 1.1e-16 90.5 103 40.8
Eucgr.H00100 Eucalyptus grandis HOM05D008849 ORTHO05D010556 4.0e-16 88.6 106 37.7
Eucgr.E01057 Eucalyptus grandis HOM05D008849 ORTHO05D010556 8.9e-16 87.4 106 35.8
Cfa014873 Carpinus fangiana HOM05D008849 ORTHO05D010556 2.0e-15 86.3 103 36.9
Sabra03G0128400 Salix brachista HOM05D005430 ORTHO05D007814 3.4e-15 85.5 101 36.6
Gorai.011G162700 Gossypium raimondii HOM05D008849 ORTHO05D010556 1.3e-14 83.6 103 37.9
Gohir.A10G120800 Gossypium hirsutum HOM05D008849 ORTHO05D010556 2.2e-14 82.8 105 37.1
FAN17G2089 Fragaria x ananassa HOM05D008849 ORTHO05D010556 6.4e-14 81.3 123 31.7
FvH4_4g05643 Fragaria vesca HOM05D008849 ORTHO05D010556 1.4e-13 80.1 122 32.8
GSVIVG01012794001 Vitis vinifera HOM05D008849 ORTHO05D010556 1.4e-13 80.1 123 35.0
Potri.002G263900 Populus trichocarpa HOM05D008849 ORTHO05D010556 7.1e-13 77.8 101 34.7
Actinidia35944 Actinidia chinensis HOM05D008849 ORTHO05D010556 2.1e-12 76.3 130 30.0
Gohir.D10G145500 Gossypium hirsutum HOM05D008849 ORTHO05D010556 2.1e-12 76.3 69 44.9
COL.COLO4_34095 Corchorus olitorius HOM05D008849 ORTHO05D010556 3.0e-11 72.4 100 34.0
QL04p034676 Quercus lobata HOM05D008849 ORTHO05D010556 3.9e-11 72.0 139 28.1
Medtr6g007125 Medicago truncatula HOM05D018373 ORTHO05D020881 1.9e-10 69.7 99 31.3
Eucgr.H00101 Eucalyptus grandis HOM05D008849 ORTHO05D010556 5.6e-10 68.2 130 33.8
Glyma.13G218100 Glycine max HOM05D014907 ORTHO05D010556 2.1e-09 66.2 105 29.5
RhsimUnG0234900 Rhododendron simsii HOM05D004546 ORTHO05D005419 2.8e-09 65.9 104 31.7
Cpa.g.sc12.57 Carica papaya HOM05D005430 ORTHO05D007814 3.6e-09 65.5 107 31.8
Psat3g162040 Pisum sativum HOM05D018373 ORTHO05D020881 8.1e-09 64.3 62 38.7
Lalb_Chr18g0055471 Lupinus albus HOM05D014907 ORTHO05D010556 1.1e-08 63.9 122 26.2
QL11p023932 Quercus lobata HOM05D008849 ORTHO05D010556 2.4e-08 62.8 112 29.5
Psat1g126640 Pisum sativum HOM05D014907 ORTHO05D010556 8.9e-08 60.8 71 36.6
TPR.G26741 Trifolium pratense HOM05D018373 ORTHO05D020881 8.9e-08 60.8 61 41.0
Dinv27154 Davidia involucrata HOM05D062440 ORTHO05D010556 2.0e-07 59.7 112 27.7
Medtr8g041940 Medicago truncatula HOM05D018373 ORTHO05D020881 2.0e-07 59.7 62 38.7
RhsimUnG0181400 Rhododendron simsii HOM05D000256 ORTHO05D000119 2.0e-07 59.7 123 31.7
Hma1.2p1_1359F.1_g278080 Hydrangea macrophylla HOM05D000256 ORTHO05D000119 2.6e-07 59.3 144 27.8
Hma1.2p1_0903F.1_g234940 Hydrangea macrophylla HOM05D000256 ORTHO05D000119 4.4e-07 58.5 114 29.8
Lalb_Chr21g0307151 Lupinus albus HOM05D009801 ORTHO05D011967 4.4e-07 58.5 125 28.0
Medtr2g461570 Medicago truncatula HOM05D014907 ORTHO05D010556 4.4e-07 58.5 73 32.9
Glyma.03G088300 Glycine max HOM05D009801 ORTHO05D011967 5.8e-07 58.2 46 39.1
Glyma.09G090600 Glycine max HOM05D009801 ORTHO05D011967 5.8e-07 58.2 46 39.1
Glyma.13G192300 Glycine max HOM05D009801 ORTHO05D011967 5.8e-07 58.2 46 39.1
Glyma.13G192500 Glycine max HOM05D009801 ORTHO05D011967 5.8e-07 58.2 46 39.1
Hma1.2p1_0453F.1_g156140 Hydrangea macrophylla HOM05D000256 ORTHO05D000119 5.8e-07 58.2 139 28.1
Lalb_Chr23g0276871 Lupinus albus HOM05D009801 ORTHO05D011967 7.6e-07 57.8 99 32.3
Glyma.13G218125 Glycine max HOM05D014907 ORTHO05D010556 9.9e-07 57.4 116 25.0
Cpa.g.sc59.84 Carica papaya HOM05D031968 ORTHO05D010556 1.7e-06 56.6 123 26.8
Glyma.16G075100 Glycine max HOM05D009801 ORTHO05D011967 1.7e-06 56.6 77 33.8
Phvul.007G007700 Phaseolus vulgaris HOM05D009801 ORTHO05D011967 1.7e-06 56.6 46 41.3
Thecc.04G212800 Theobroma cacao HOM05D066189 ORTHO05D010556 1.7e-06 56.6 100 29.0
TPR.G17735 Trifolium pratense HOM05D014907 ORTHO05D010556 1.7e-06 56.6 58 36.2


User provided reference genes

Program Settings