Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.15G043800 Manihot esculenta HOM05D006230 ORTHO05D007598 1.9e-78 295.8 155 100.0
Cfa014753 Carpinus fangiana HOM05D006230 ORTHO05D007598 1.3e-50 203.4 153 69.9
Haze_11428 Corylus avellana HOM05D006230 ORTHO05D007598 3.2e-49 198.7 153 68.0
Cpa.g.sc44.25 Carica papaya HOM05D006230 ORTHO05D007598 9.2e-49 197.2 149 69.8
Dinv27088 Davidia involucrata HOM05D006230 ORTHO05D007598 1.2e-48 196.8 154 72.1
Ciclev10006136m.g Citrus clementina HOM05D006230 ORTHO05D007598 2.1e-48 196.1 155 68.4
Atru.chr4.1981 Acer truncatum HOM05D006230 ORTHO05D007598 4.6e-48 194.9 153 68.6
Potri.010G068500 Populus trichocarpa HOM05D006230 ORTHO05D007598 1.0e-47 193.7 155 66.5
Sabra10G0038500 Salix brachista HOM05D006230 ORTHO05D007598 1.0e-47 193.7 157 68.2
Prupe.1G045100 Prunus persica HOM05D006230 ORTHO05D007598 3.9e-47 191.8 154 65.6
AL1G14110 Arabidopsis lyrata HOM05D006230 ORTHO05D007598 5.1e-47 191.4 127 74.8
THA.LOC104801077 Tarenaya hassleriana HOM05D006230 ORTHO05D007598 6.6e-47 191.0 153 67.3
AL4G29120 Arabidopsis lyrata HOM05D006230 ORTHO05D007598 8.7e-47 190.7 133 72.2
AT2G33450 Arabidopsis thaliana HOM05D006230 ORTHO05D007598 1.9e-46 189.5 133 71.4
Sp1g03290 Schrenkiella parvula HOM05D006230 ORTHO05D007598 1.9e-46 189.5 130 74.6
COL.COLO4_15930 Corchorus olitorius HOM05D006230 ORTHO05D007598 2.5e-46 189.1 142 71.8
Lalb_Chr01g0020881 Lupinus albus HOM05D006230 ORTHO05D007598 2.5e-46 189.1 142 69.7
MD16G1223800 Malus domestica HOM05D006230 ORTHO05D007598 2.5e-46 189.1 153 62.7
Carub.0004s1508 Capsella rubella HOM05D006230 ORTHO05D007598 4.3e-46 188.3 133 71.4
CiPaw.02G108600 Carya illinoinensis HOM05D006230 ORTHO05D007598 4.3e-46 188.3 163 65.6
Carub.0001s0365 Capsella rubella HOM05D006230 ORTHO05D007598 5.6e-46 188.0 116 79.3
Aa31LG5G3840 Aethionema arabicum HOM05D006230 ORTHO05D007598 7.3e-46 187.6 132 74.2
CARHR127460 Cardamine hirsuta HOM05D006230 ORTHO05D007598 7.3e-46 187.6 133 71.4
AUR62015538 Chenopodium quinoa HOM05D006230 ORTHO05D007598 2.1e-45 186.0 150 69.3
Thhalv10017390m.g Eutrema salsugineum HOM05D006230 ORTHO05D007598 2.1e-45 186.0 137 70.8
Duzib212G0996 Durio zibethinus HOM05D006230 ORTHO05D007598 2.8e-45 185.7 117 82.9
Sp4g15790 Schrenkiella parvula HOM05D006230 ORTHO05D007598 2.8e-45 185.7 134 71.6
Sc13g0005900 Simmondsia chinensis HOM05D006230 ORTHO05D007598 3.6e-45 185.3 151 70.2
QL06p019992 Quercus lobata HOM05D006230 ORTHO05D007598 4.8e-45 184.9 159 66.0
TAR636G3560 Trochodendron aralioides HOM05D006230 ORTHO05D007598 4.8e-45 184.9 157 65.6
BcaB02g10562 Brassica carinata HOM05D006230 ORTHO05D007598 1.1e-44 183.7 135 73.3
Hma1.2p1_0112F.1_g054490 Hydrangea macrophylla HOM05D006230 ORTHO05D007598 1.8e-44 183.0 154 64.3
Thecc.04G260000 Theobroma cacao HOM05D006230 ORTHO05D007598 1.8e-44 183.0 155 67.7
Psat6g103800 Pisum sativum HOM05D006230 ORTHO05D007598 2.4e-44 182.6 130 74.6
BraA04t18078Z Brassica rapa HOM05D006230 ORTHO05D007598 4.0e-44 181.8 127 74.8
Gohir.A02G041200 Gossypium hirsutum HOM05D006230 ORTHO05D007598 4.0e-44 181.8 156 67.3
BolC4t27775H Brassica oleracea HOM05D006230 ORTHO05D007598 5.3e-44 181.4 127 74.0
Potri.008G169800 Populus trichocarpa HOM05D006230 ORTHO05D007598 5.3e-44 181.4 126 73.8
CsaV3_3G011880 Cucumis sativus L. HOM05D006230 ORTHO05D007598 6.9e-44 181.0 155 65.8
Lalb_Chr03g0037521 Lupinus albus HOM05D006230 ORTHO05D007598 6.9e-44 181.0 142 68.3
Aqoxy2G03714 Aquilegia oxysepala HOM05D006230 ORTHO05D007598 9.0e-44 180.6 156 64.7
EL10Ac3g04971 Beta vulgaris HOM05D006230 ORTHO05D007598 9.0e-44 180.6 157 64.3
BcaB06g28689 Brassica carinata HOM05D006230 ORTHO05D007598 2.0e-43 179.5 128 75.0
FAN12G2171 Fragaria x ananassa HOM05D006230 ORTHO05D007598 2.0e-43 179.5 151 62.9
Gohir.D02G047000 Gossypium hirsutum HOM05D006230 ORTHO05D007598 2.0e-43 179.5 156 66.7
Gohir.A10G109400 Gossypium hirsutum HOM05D006230 ORTHO05D007598 2.6e-43 179.1 156 67.9
Gorai.005G052000 Gossypium raimondii HOM05D006230 ORTHO05D007598 2.6e-43 179.1 156 66.7
Oeu023312.1 Olea europaea HOM05D006230 ORTHO05D007598 2.6e-43 179.1 135 72.6
TPR.G32792 Trifolium pratense HOM05D006230 ORTHO05D007598 2.6e-43 179.1 158 65.8
C04p62980 Brassica napus HOM05D006230 ORTHO05D007598 4.4e-43 178.3 127 73.2
FvH4_4g04200 Fragaria vesca HOM05D006230 ORTHO05D007598 4.4e-43 178.3 151 62.3
RcHm_v2.0_Chr4g0394691 Rosa chinensis HOM05D006230 ORTHO05D007598 4.4e-43 178.3 151 60.9
Medtr1g041320 Medicago truncatula HOM05D006230 ORTHO05D007598 5.8e-43 177.9 153 65.4
A04p25750 Brassica napus HOM05D006230 ORTHO05D007598 7.6e-43 177.6 128 74.2
Duzib151G0304 Durio zibethinus HOM05D006230 ORTHO05D007598 7.6e-43 177.6 117 78.6
PGR004G2031 Punica granatum HOM05D006230 ORTHO05D007598 9.9e-43 177.2 153 66.7
MD13G1218400 Malus domestica HOM05D006230 ORTHO05D007598 1.3e-42 176.8 111 74.8
TWI73G0434 Tripterygium wilfordii HOM05D006230 ORTHO05D007598 1.3e-42 176.8 141 67.4
Ca_05177_v3 Cicer arietinum L. HOM05D006230 ORTHO05D007598 2.2e-42 176.0 155 64.5
Glyma.10G002600 Glycine max HOM05D006230 ORTHO05D007598 2.2e-42 176.0 155 65.2
BcaC02g11431 Brassica carinata HOM05D006230 ORTHO05D007598 2.9e-42 175.6 135 71.1
C04p15650 Brassica napus HOM05D006230 ORTHO05D007598 2.9e-42 175.6 135 71.1
CSS0007771 Camellia sinensis var. sinensis HOM05D006230 ORTHO05D007598 2.9e-42 175.6 162 63.6
FAN17G1889 Fragaria x ananassa HOM05D006230 ORTHO05D007598 4.9e-42 174.9 154 61.0
ClCG05G004160 Citrullus lanatus HOM05D006230 ORTHO05D007598 6.4e-42 174.5 155 65.2
Eucgr.H02995 Eucalyptus grandis HOM05D006230 ORTHO05D007598 6.4e-42 174.5 155 63.9
Phvul.007G278700 Phaseolus vulgaris HOM05D006230 ORTHO05D007598 8.4e-42 174.1 116 75.9
Gohir.D10G157800 Gossypium hirsutum HOM05D006230 ORTHO05D007598 1.1e-41 173.7 156 67.3
Gorai.011G177300 Gossypium raimondii HOM05D006230 ORTHO05D007598 1.9e-41 172.9 156 66.7
Nitab4.5_0001425g0090 Nicotiana tabacum HOM05D006230 ORTHO05D007598 1.9e-41 172.9 132 70.5
Nitab4.5_0006936g0040 Nicotiana tabacum HOM05D006230 ORTHO05D007598 1.9e-41 172.9 132 70.5
Sed0003219 Sechium edule HOM05D006230 ORTHO05D007598 1.9e-41 172.9 124 72.6
Cc03_g05900 Coffea canephora HOM05D006230 ORTHO05D007598 2.4e-41 172.6 128 73.4
MELO3C006400.2 Cucumis melo HOM05D006230 ORTHO05D007598 2.4e-41 172.6 155 63.2
PSO017G6779 Papaver somniferum HOM05D006230 ORTHO05D007598 3.2e-41 172.2 156 63.5
Actinidia20827 Actinidia chinensis HOM05D006230 ORTHO05D007598 4.2e-41 171.8 137 67.9
Lj6g0026311 Lotus japonicus HOM05D006230 ORTHO05D007598 4.2e-41 171.8 152 63.2
CANSAT78G0887 Cannabis sativa HOM05D006230 ORTHO05D007598 9.3e-41 170.6 158 60.8
CAN.G220.45 Capsicum annuum HOM05D006230 ORTHO05D007598 1.2e-40 170.2 155 63.2
PSO063G4949 Papaver somniferum HOM05D006230 ORTHO05D007598 1.2e-40 170.2 155 63.9
CANSAT78G0232 Cannabis sativa HOM05D006230 ORTHO05D007598 2.1e-40 169.5 158 60.1
ECA234G3973 Erigeron canadensis HOM05D006230 ORTHO05D007598 2.1e-40 169.5 156 60.3
TWI53G0221 Tripterygium wilfordii HOM05D006230 ORTHO05D007598 2.1e-40 169.5 131 67.9
Actinidia35808 Actinidia chinensis HOM05D006230 ORTHO05D007598 2.7e-40 169.1 153 61.4
Peaxi162Scf00602g00421 Petunia axillaris HOM05D006230 ORTHO05D007598 3.5e-40 168.7 116 76.7
Sopen09g033320 Solanum pennellii HOM05D006230 ORTHO05D007598 3.5e-40 168.7 122 72.1
Solyc09g090410.3 Solanum lycopersicum HOM05D006230 ORTHO05D007598 6.0e-40 167.9 122 72.1
GSVIVG01027870001 Vitis vinifera HOM05D006230 ORTHO05D007598 6.0e-40 167.9 117 76.9
Zm00001eb222850 Zea mays HOM05D006230 ORTHO05D007598 7.8e-40 167.5 121 69.4
BcaC02g07821 Brassica carinata HOM05D006230 ORTHO05D007598 1.0e-39 167.2 128 70.3
HanXRQChr14g0434851 Helianthus annuus HOM05D006230 ORTHO05D007598 1.0e-39 167.2 133 69.2
BolC4t23134H Brassica oleracea HOM05D006230 ORTHO05D007598 1.3e-39 166.8 136 69.1
PGSC0003DMG400017161 Solanum tuberosum HOM05D006230 ORTHO05D007598 1.3e-39 166.8 122 70.5
Hund11917 Selenicereus undatus HOM05D006230 ORTHO05D007598 3.9e-39 165.2 152 61.8
Sed0015876 Sechium edule HOM05D006230 ORTHO05D007598 8.7e-39 164.1 143 64.3
Lsat_1_v5_gn_2_39681 Lactuca sativa HOM05D006230 ORTHO05D007598 1.1e-38 163.7 158 63.3
Oeu059405.1 Olea europaea HOM05D006230 ORTHO05D007598 1.5e-38 163.3 170 56.5
vmacro08530 Vaccinium macrocarpon HOM05D006230 ORTHO05D007598 2.5e-38 162.5 153 59.5
DCAR_002306 Daucus carota HOM05D006230 ORTHO05D007598 3.3e-38 162.2 157 60.5
ATR0736G074 Amborella trichopoda HOM05D006230 ORTHO05D007598 4.3e-38 161.8 123 72.4
Os05g0101400 Oryza sativa ssp. japonica HOM05D006230 ORTHO05D007598 1.6e-37 159.8 121 67.8
Zm00001eb047510 Zea mays HOM05D006230 ORTHO05D007598 1.6e-37 159.8 155 58.1
Migut.G00496 Erythranthe guttata HOM05D006230 ORTHO05D007598 1.8e-36 156.4 139 65.5
CDE11G0022 Ceratophyllum demersum HOM05D006230 ORTHO05D007598 3.1e-36 155.6 155 56.8
CDE05G0971 Ceratophyllum demersum HOM05D006230 ORTHO05D007598 9.0e-36 154.1 132 62.1
HPP92_012809 Vanilla planifolia HOM05D006230 ORTHO05D007598 9.0e-36 154.1 116 71.6
unitig_32.g10851 Utricularia gibba HOM05D006230 ORTHO05D007598 4.5e-35 151.8 132 65.2
SalBow3G4585 Salvia bowleyana HOM05D006230 ORTHO05D007598 5.8e-35 151.4 154 53.2
arahy.Tifrunner.gnm1.ann1.ADZ0J4 Arachis hypogaea HOM05D006230 ORTHO05D007598 7.6e-35 151.0 78 96.2
RcHm_v2.0_Chr4g0394651 Rosa chinensis HOM05D006230 ORTHO05D007598 2.2e-34 149.4 153 52.3
SGA_v2.0_scaffold67G22731 Striga asiatica HOM05D006230 ORTHO05D007598 1.1e-33 147.1 157 57.3
Thecc.10G124200 Theobroma cacao HOM05D006230 ORTHO05D007598 1.9e-33 146.4 78 92.3
Prupe.8G083300 Prunus persica HOM05D006230 ORTHO05D007598 4.3e-30 135.2 81 77.8
SEGI_13554 Sequoiadendron giganteum HOM05D006230 ORTHO05D007598 5.6e-30 134.8 79 83.5
Rhsim04G0174900 Rhododendron simsii HOM05D006230 ORTHO05D007598 8.1e-29 131.0 88 76.1
MD00G1118000 Malus domestica HOM05D006230 ORTHO05D007598 1.8e-28 129.8 75 78.7
Pp3c5_28500 Physcomitrium patens HOM05D006230 ORTHO05D007598 4.9e-26 121.7 123 56.1
AagrBONN_evm.TU.Sc2ySwM_228.3795 Anthoceros agrestis HOM05D006230 ORTHO05D007598 8.4e-26 120.9 108 57.4
Duzib052G0467 Durio zibethinus HOM05D006230 ORTHO05D007598 9.3e-25 117.5 114 58.8
Ah.04g155450 Amaranthus hybridus HOM05D000071 ORTHO05D007598 1.6e-24 116.7 117 57.3
Pp3c6_1140 Physcomitrium patens HOM05D006230 ORTHO05D007598 6.0e-24 114.8 123 54.5
Mapoly0087s0077 Marchantia polymorpha HOM05D006230 ORTHO05D007598 9.6e-22 107.5 119 50.4
CBR_g23072 Chara braunii HOM05D006230 ORTHO05D007598 6.9e-20 101.3 78 64.1
SMO131G0001 Selaginella moellendorffii HOM05D006230 ORTHO05D007598 6.9e-20 101.3 75 62.7
Cre06.g265800 Chlamydomonas reinhardtii HOM05D006230 ORTHO05D007598 7.1e-17 91.3 79 57.0
MCO07G061 Micromonas commoda HOM05D006230 ORTHO05D007598 2.3e-15 86.3 73 57.5
Nn3g19733 Nelumbo nucifera HOM05D006230 ORTHO05D007598 1.4e-07 60.5 36 86.1
VMungo0684G0001 Vigna mungo HOM05D006230 ORTHO05D007598 3.3e-06 55.8 65 46.2


User provided reference genes

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