Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.15G013500 Manihot esculenta HOM05D006081 ORTHO05D007628 1.2e-103 379.8 190 100.0
Manes.03G194000 Manihot esculenta HOM05D006081 ORTHO05D007628 4.3e-88 328.2 189 86.2
Potri.008G210100 Populus trichocarpa HOM05D006081 ORTHO05D007628 2.6e-69 265.8 189 73.0
Sabra08G0154300 Salix brachista HOM05D006081 ORTHO05D007628 2.7e-66 255.8 187 71.1
Cfa015373 Carpinus fangiana HOM05D006081 ORTHO05D007628 1.7e-65 253.1 192 69.8
TWI53G0242 Tripterygium wilfordii HOM05D006081 ORTHO05D007628 3.9e-65 251.9 189 68.8
CSS0030149 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 1.8e-62 243.0 191 64.9
vmacro08134 Vaccinium macrocarpon HOM05D006081 ORTHO05D007628 6.8e-62 241.1 192 65.6
GSVIVG01017744001 Vitis vinifera HOM05D006081 ORTHO05D007628 8.9e-62 240.7 191 65.4
Medtr2g436940 Medicago truncatula HOM05D006081 ORTHO05D007628 1.5e-61 240.0 195 65.1
Phvul.009G246800 Phaseolus vulgaris HOM05D006081 ORTHO05D007628 1.5e-61 240.0 194 66.0
Thecc.04G283000 Theobroma cacao HOM05D006081 ORTHO05D007628 1.5e-61 240.0 188 69.1
Cpa.g.sc16.161 Carica papaya HOM05D006081 ORTHO05D007628 3.4e-61 238.8 193 66.3
Eucgr.H03897 Eucalyptus grandis HOM05D006081 ORTHO05D007628 1.3e-60 236.9 190 64.7
Lj6g0000146 Lotus japonicus HOM05D006081 ORTHO05D007628 1.7e-60 236.5 194 63.9
Rhsim04G0220300 Rhododendron simsii HOM05D006081 ORTHO05D007628 1.7e-60 236.5 195 63.6
VMungo1309G0529 Vigna mungo HOM05D006081 ORTHO05D007628 1.7e-60 236.5 194 64.9
arahy.Tifrunner.gnm1.ann1.EZB5Q6 Arachis hypogaea HOM05D006081 ORTHO05D007628 2.2e-60 236.1 189 64.0
PGR031G1107 Punica granatum HOM05D006081 ORTHO05D007628 2.2e-60 236.1 189 64.0
QL06p008580 Quercus lobata HOM05D006081 ORTHO05D007628 2.9e-60 235.7 194 64.9
Atru.chr4.2827 Acer truncatum HOM05D006081 ORTHO05D007628 4.9e-60 235.0 183 67.8
Prupe.1G138200 Prunus persica HOM05D006081 ORTHO05D007628 4.9e-60 235.0 202 62.9
arahy.Tifrunner.gnm1.ann1.TA2ZSY Arachis hypogaea HOM05D006081 ORTHO05D007628 8.4e-60 234.2 189 64.0
Dinv29771 Davidia involucrata HOM05D006081 ORTHO05D007628 1.1e-59 233.8 192 64.6
CiPaw.01G149700 Carya illinoinensis HOM05D006081 ORTHO05D007628 1.4e-59 233.4 196 64.8
Duzib151G0152 Durio zibethinus HOM05D006081 ORTHO05D007628 1.9e-59 233.0 190 67.9
Glyma.15G153100 Glycine max HOM05D006081 ORTHO05D007628 5.4e-59 231.5 192 64.1
Psat1g153280 Pisum sativum HOM05D006081 ORTHO05D007628 1.2e-58 230.3 194 63.4
Actinidia40266 Actinidia chinensis HOM05D006081 ORTHO05D007628 1.6e-58 229.9 191 62.3
TAR636G3617 Trochodendron aralioides HOM05D006081 ORTHO05D007628 2.1e-58 229.6 189 63.5
HanXRQChr03g0079991 Helianthus annuus HOM05D006081 ORTHO05D007628 2.7e-58 229.2 192 63.0
CiPaw.02G083900 Carya illinoinensis HOM05D006081 ORTHO05D007628 3.5e-58 228.8 196 63.3
Lalb_Chr18g0051761 Lupinus albus HOM05D006081 ORTHO05D007628 3.5e-58 228.8 191 61.3
Ca_01966_v3 Cicer arietinum L. HOM05D006081 ORTHO05D007628 7.8e-58 227.6 194 62.9
Glyma.09G045900 Glycine max HOM05D006081 ORTHO05D007628 7.8e-58 227.6 193 62.7
Gohir.D02G054100 Gossypium hirsutum HOM05D006081 ORTHO05D007628 1.7e-57 226.5 190 64.2
Gorai.005G059600 Gossypium raimondii HOM05D006081 ORTHO05D007628 1.7e-57 226.5 190 64.2
Gohir.A02G048800 Gossypium hirsutum HOM05D006081 ORTHO05D007628 2.3e-57 226.1 189 63.5
RcHm_v2.0_Chr4g0421971 Rosa chinensis HOM05D006081 ORTHO05D007628 4.3e-56 221.9 197 59.9
Cc00_g10580 Coffea canephora HOM05D006081 ORTHO05D007628 1.3e-55 220.3 190 61.1
FvH4_4g17860 Fragaria vesca HOM05D006081 ORTHO05D007628 2.8e-55 219.2 195 60.0
FAN07G2255 Fragaria x ananassa HOM05D006081 ORTHO05D007628 2.8e-55 219.2 195 59.5
Lsat_1_v5_gn_5_49301 Lactuca sativa HOM05D006081 ORTHO05D007628 3.6e-55 218.8 188 61.2
FAN17G1774 Fragaria x ananassa HOM05D006081 ORTHO05D007628 6.2e-55 218.0 195 60.0
ClCG06G005230 Citrullus lanatus HOM05D006081 ORTHO05D007628 1.4e-54 216.9 194 60.3
FAN12G2613 Fragaria x ananassa HOM05D006081 ORTHO05D007628 1.4e-54 216.9 195 59.5
MD16G1171400 Malus domestica HOM05D006081 ORTHO05D007628 1.4e-54 216.9 192 59.9
Ciclev10005978m.g Citrus clementina HOM05D006081 ORTHO05D007628 2.6e-53 212.6 194 60.8
CsaV3_6G017270 Cucumis sativus L. HOM05D006081 ORTHO05D007628 3.4e-53 212.2 194 59.3
Oeu027733.1 Olea europaea HOM05D006081 ORTHO05D007628 5.8e-53 211.5 193 58.5
ECA240G0281 Erigeron canadensis HOM05D006081 ORTHO05D007628 1.7e-52 209.9 193 58.5
THA.LOC104820251 Tarenaya hassleriana HOM05D006081 ORTHO05D007628 2.9e-52 209.1 190 58.9
CANSAT78G1428 Cannabis sativa HOM05D006081 ORTHO05D007628 3.8e-52 208.8 192 59.4
MBI19_g30830_MAGBIO Magnolia biondii HOM05D006081 ORTHO05D007628 4.9e-52 208.4 192 56.8
MSTRG.21799 Avicennia marina HOM05D006081 ORTHO05D007628 6.4e-52 208.0 195 57.9
Solyc01g067080.3 Solanum lycopersicum HOM05D006081 ORTHO05D007628 6.4e-52 208.0 187 55.6
SGA_v2.0_scaffold55G19699 Striga asiatica HOM05D006081 ORTHO05D007628 6.4e-52 208.0 190 57.9
Nitab4.5_0003972g0010 Nicotiana tabacum HOM05D006081 ORTHO05D007628 8.4e-52 207.6 190 57.4
MELO3C021343.2 Cucumis melo HOM05D006081 ORTHO05D007628 1.1e-51 207.2 194 59.3
Sopen01g028790 Solanum pennellii HOM05D006081 ORTHO05D007628 1.1e-51 207.2 187 55.6
Lalb_Chr20g0114491 Lupinus albus HOM05D006081 ORTHO05D007628 1.4e-51 206.8 188 58.0
Aa31LG8G8110 Aethionema arabicum HOM05D006081 ORTHO05D007628 2.4e-51 206.1 188 59.6
DCAR_030534 Daucus carota HOM05D006081 ORTHO05D007628 2.4e-51 206.1 192 56.2
Migut.N00097 Erythranthe guttata HOM05D006081 ORTHO05D007628 9.3e-51 204.1 189 57.7
Sed0014998 Sechium edule HOM05D006081 ORTHO05D007628 9.3e-51 204.1 188 60.6
CARHR097370 Cardamine hirsuta HOM05D006081 ORTHO05D007628 1.2e-50 203.8 191 56.0
Nitab4.5_0003749g0060 Nicotiana tabacum HOM05D006081 ORTHO05D007628 1.2e-50 203.8 191 56.5
Sp3g19430 Schrenkiella parvula HOM05D006081 ORTHO05D007628 1.6e-50 203.4 191 56.5
TAR365G0221 Trochodendron aralioides HOM05D006081 ORTHO05D007628 2.1e-50 203.0 162 63.6
SalBow5G1281 Salvia bowleyana HOM05D006081 ORTHO05D007628 2.7e-50 202.6 187 56.1
Thhalv10021583m.g Eutrema salsugineum HOM05D006081 ORTHO05D007628 4.6e-50 201.8 190 57.9
Lj6A673G88 Lonicera japonica HOM05D006081 ORTHO05D007628 4.6e-50 201.8 136 67.6
TPR.G26808 Trifolium pratense HOM05D006081 ORTHO05D007628 1.0e-49 200.7 130 72.3
Peaxi162Scf00534g00212 Petunia axillaris HOM05D006081 ORTHO05D007628 1.3e-49 200.3 192 56.2
AL3G35480 Arabidopsis lyrata HOM05D006081 ORTHO05D007628 1.7e-49 199.9 188 57.4
PSO170G3586 Papaver somniferum HOM05D006081 ORTHO05D007628 5.1e-49 198.4 193 55.4
PGSC0003DMG400022662 Solanum tuberosum HOM05D006081 ORTHO05D007628 1.9e-48 196.4 190 54.7
PSO210G2816 Papaver somniferum HOM05D006081 ORTHO05D007628 2.5e-48 196.1 194 55.7
AT3G21400 Arabidopsis thaliana HOM05D006081 ORTHO05D007628 9.6e-48 194.1 189 55.6
C03p51690 Brassica napus HOM05D006081 ORTHO05D007628 9.6e-48 194.1 190 53.2
BcaB04g19166 Brassica carinata HOM05D006081 ORTHO05D007628 2.8e-47 192.6 191 54.5
BcaC01g03506 Brassica carinata HOM05D006081 ORTHO05D007628 4.8e-47 191.8 190 52.6
BolC3t17454H Brassica oleracea HOM05D006081 ORTHO05D007628 4.8e-47 191.8 190 52.6
Carub.0003s2143 Capsella rubella HOM05D006081 ORTHO05D007628 4.8e-47 191.8 193 54.4
Oeu023291.2 Olea europaea HOM05D006081 ORTHO05D007628 4.8e-47 191.8 234 47.9
BraA03t13376Z Brassica rapa HOM05D006081 ORTHO05D007628 1.4e-46 190.3 190 53.2
A03p42230 Brassica napus HOM05D006081 ORTHO05D007628 1.8e-46 189.9 190 53.2
Sc13g0003510 Simmondsia chinensis HOM05D006081 ORTHO05D007628 3.1e-46 189.1 194 52.1
BcaC05g28170 Brassica carinata HOM05D006081 ORTHO05D007628 5.8e-45 184.9 192 52.6
C05p42070 Brassica napus HOM05D006081 ORTHO05D007628 5.8e-45 184.9 192 52.6
BolC5t32937H Brassica oleracea HOM05D006081 ORTHO05D007628 5.8e-45 184.9 192 52.6
FAN12G2474 Fragaria x ananassa HOM05D006081 ORTHO05D007628 5.8e-45 184.9 113 76.1
CSS0018730 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 1.4e-43 180.3 117 71.8
BcaB06g26235 Brassica carinata HOM05D006081 ORTHO05D007628 1.9e-43 179.9 190 52.6
unitig_26.g10542 Utricularia gibba HOM05D006081 ORTHO05D007628 1.9e-43 179.9 195 49.7
AUR62043167 Chenopodium quinoa HOM05D006081 ORTHO05D007628 7.9e-42 174.5 135 57.8
Aqoxy2G03026 Aquilegia oxysepala HOM05D006081 ORTHO05D007628 1.0e-41 174.1 130 66.2
CDE02G2676 Ceratophyllum demersum HOM05D006081 ORTHO05D000739 1.0e-41 174.1 191 52.4
EL10Ac3g06586 Beta vulgaris HOM05D006081 ORTHO05D007628 1.1e-40 170.6 196 45.9
CAN.G556.12 Capsicum annuum HOM05D006081 ORTHO05D007628 3.3e-40 169.1 113 69.0
CDE09G1305 Ceratophyllum demersum HOM05D006081 ORTHO05D007628 4.8e-39 165.2 191 49.7
AUR62036825 Chenopodium quinoa HOM05D006081 ORTHO05D007628 9.0e-38 161.0 161 50.9
A05p27230 Brassica napus HOM05D006081 ORTHO05D007628 2.6e-37 159.5 175 50.9
BraA05t21612Z Brassica rapa HOM05D006081 ORTHO05D007628 2.6e-37 159.5 171 49.7
ATR0706G092 Amborella trichopoda HOM05D006081 ORTHO05D007628 2.3e-33 146.4 126 61.9
Zm00001eb410420 Zea mays HOM05D006081 ORTHO05D007628 8.7e-33 144.4 192 44.3
Os12g0540700 Oryza sativa ssp. japonica HOM05D006081 ORTHO05D007628 1.3e-31 140.6 186 44.1
TAR365G0700 Trochodendron aralioides HOM05D006081 ORTHO05D007628 2.1e-31 139.8 92 70.7
Haze_01224 Corylus avellana HOM05D006081 ORTHO05D007628 2.8e-31 139.4 82 80.5
Actinidia01470 Actinidia chinensis HOM05D006081 ORTHO05D007628 8.2e-31 137.9 191 45.0
SEGI_25455 Sequoiadendron giganteum HOM05D006081 ORTHO05D007628 1.5e-29 133.7 187 42.2
HPP92_001321 Vanilla planifolia HOM05D006081 ORTHO05D007628 1.5e-29 133.7 193 42.0
MBI19_g12810_MAGBIO Magnolia biondii HOM05D006081 ORTHO05D007628 3.4e-29 132.5 96 61.5
AUR62038616 Chenopodium quinoa HOM05D006081 ORTHO05D007628 1.2e-26 124.0 94 55.3
MD13G1169900 Malus domestica HOM05D006081 ORTHO05D007628 1.0e-25 120.9 131 53.4
CSS0011440 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 3.7e-23 112.5 109 57.8
Potri.010G024000 Populus trichocarpa HOM05D006081 ORTHO05D007628 1.8e-22 110.2 65 80.0
Nn5g30060 Nelumbo nucifera HOM05D006081 ORTHO05D007628 7.9e-18 94.7 101 55.4
Haze_01225 Corylus avellana HOM05D006081 ORTHO05D007628 3.0e-17 92.8 102 54.9
Pp3c1_29830 Physcomitrium patens HOM05D006081 ORTHO05D007628 1.5e-16 90.5 122 41.0
Mapoly0041s0011 Marchantia polymorpha HOM05D006081 ORTHO05D007628 1.5e-13 80.5 120 39.2
AagrBONN_evm.TU.Sc2ySwM_368.2309 Anthoceros agrestis HOM05D006081 ORTHO05D007628 1.3e-12 77.4 109 35.8
CBR_g29894 Chara braunii HOM05D008095 ORTHO05D010826 3.2e-11 72.8 114 33.3
FAN22G0279 Fragaria x ananassa HOM05D006081 ORTHO05D007628 2.1e-10 70.1 100 46.0
Hma1.2p1_1676F.1_g297010 Hydrangea macrophylla HOM05D006081 ORTHO05D007628 6.7e-09 65.1 45 71.1
BolC7t43135H Brassica oleracea HOM05D006081 ORTHO05D033520 3.3e-08 62.8 45 66.7


User provided reference genes

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