Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.15G012900 Manihot esculenta HOM05D006719 ORTHO05D007063 1.2e-40 170.2 149 100.0
Manes.03G194500 Manihot esculenta HOM05D006719 ORTHO05D007063 1.1e-25 120.6 149 81.2
Potri.010G024600 Populus trichocarpa HOM05D006719 ORTHO05D007063 1.2e-21 107.1 151 74.2
Thecc.04G284000 Theobroma cacao HOM05D006719 ORTHO05D007063 8.7e-20 100.9 149 72.5
COL.COLO4_13881 Corchorus olitorius HOM05D006719 ORTHO05D007063 1.1e-19 100.5 149 73.2
Duzib151G0940 Durio zibethinus HOM05D006719 ORTHO05D007063 5.6e-19 98.2 149 66.4
Atru.chr4.2828 Acer truncatum HOM05D006719 ORTHO05D007063 3.6e-18 95.5 150 74.7
Potri.008G207500 Populus trichocarpa HOM05D006719 ORTHO05D007063 8.1e-18 94.4 140 68.6
Duzib212G0625 Durio zibethinus HOM05D006719 ORTHO05D007063 1.1e-17 94.0 149 69.1
Duzib052G0445 Durio zibethinus HOM05D006719 ORTHO05D007063 3.4e-16 89.0 149 70.5
Cpa.g.sc16.165 Carica papaya HOM05D006719 ORTHO05D007063 1.3e-15 87.0 146 71.9
Cfa015380 Carpinus fangiana HOM05D006719 ORTHO05D007063 1.3e-15 87.0 152 44.7
CSS0008404 Camellia sinensis var. sinensis HOM05D006719 ORTHO05D007063 1.7e-15 86.7 149 62.4
CSS0019267 Camellia sinensis var. sinensis HOM05D006719 ORTHO05D007063 1.7e-15 86.7 149 62.4
Gorai.011G189600 Gossypium raimondii HOM05D006719 ORTHO05D007063 3.8e-15 85.5 139 71.9
Ciclev10006148m.g Citrus clementina HOM05D006719 ORTHO05D007063 4.9e-15 85.1 152 65.1
Gohir.A10G163700 Gossypium hirsutum HOM05D006719 ORTHO05D007063 8.4e-15 84.3 140 71.4
Gohir.D10G170100 Gossypium hirsutum HOM05D006719 ORTHO05D007063 2.4e-14 82.8 139 71.2
GSVIVG01017752001 Vitis vinifera HOM05D006719 ORTHO05D007063 3.2e-14 82.4 148 75.0
Hma1.2p1_2670F.1_g326650 Hydrangea macrophylla HOM05D006719 ORTHO05D007063 1.2e-13 80.5 133 72.9
Actinidia40259 Actinidia chinensis HOM05D006719 ORTHO05D007063 1.6e-13 80.1 149 70.5
CiPaw.02G083300 Carya illinoinensis HOM05D006719 ORTHO05D007063 3.5e-13 79.0 132 75.0
Gorai.006G263400 Gossypium raimondii HOM05D006719 ORTHO05D007063 3.5e-13 79.0 150 61.3
Dinv44385 Davidia involucrata HOM05D006719 ORTHO05D007063 4.6e-13 78.6 151 67.5
QL06p008791 Quercus lobata HOM05D006719 ORTHO05D007063 7.9e-13 77.8 134 76.9
Gohir.D09G240400 Gossypium hirsutum HOM05D006719 ORTHO05D007063 1.0e-12 77.4 56 75.0
MD16G1170500 Malus domestica HOM05D006719 ORTHO05D007063 1.3e-12 77.0 144 70.1
Gohir.A09G239500 Gossypium hirsutum HOM05D006719 ORTHO05D007063 1.8e-12 76.6 56 75.0
Oeu037752.1 Olea europaea HOM05D006719 ORTHO05D007063 1.8e-12 76.6 147 68.0
TWI09G1121 Tripterygium wilfordii HOM05D006719 ORTHO05D007063 6.7e-12 74.7 152 71.1
TWI53G1176 Tripterygium wilfordii HOM05D006719 ORTHO05D007063 6.7e-12 74.7 154 70.1
vmacro08144 Vaccinium macrocarpon HOM05D006719 ORTHO05D007063 8.7e-12 74.3 150 64.7
vmacro22972 Vaccinium macrocarpon HOM05D006719 ORTHO05D007063 8.7e-12 74.3 150 64.7
MD13G1169300 Malus domestica HOM05D006719 ORTHO05D007063 1.9e-11 73.2 148 62.8
Lj6g0006694 Lotus japonicus HOM05D006719 ORTHO05D007063 4.3e-11 72.0 152 70.4
Prupe.1G137900 Prunus persica HOM05D006719 ORTHO05D007063 4.3e-11 72.0 152 61.8
CiPaw.01G149100 Carya illinoinensis HOM05D006719 ORTHO05D007063 1.6e-10 70.1 154 40.9
HanXRQChr08g0227651 Helianthus annuus HOM05D006719 ORTHO05D007063 1.6e-10 70.1 130 69.2
FvH4_4g17930 Fragaria vesca HOM05D006719 ORTHO05D007063 2.1e-10 69.7 153 67.3
DCAR_030531 Daucus carota HOM05D006719 ORTHO05D007063 2.8e-10 69.3 153 55.6
Sabra10G0014400 Salix brachista HOM05D006719 ORTHO05D007063 3.7e-10 68.9 179 38.5
Nn4g25876 Nelumbo nucifera HOM05D006719 ORTHO05D007063 4.8e-10 68.6 145 59.3
VMungo1309G0351 Vigna mungo HOM05D006719 ORTHO05D007063 1.1e-09 67.4 152 57.9
Carub.0007s2587 Capsella rubella HOM05D006719 ORTHO05D007063 1.8e-09 66.6 153 61.4
FAN12G0931 Fragaria x ananassa HOM05D006719 ORTHO05D007063 1.8e-09 66.6 153 64.7
Solyc01g066900.4 Solanum lycopersicum HOM05D006719 ORTHO05D007063 2.4e-09 66.2 149 59.7
Sopen01g028510 Solanum pennellii HOM05D006719 ORTHO05D007063 2.4e-09 66.2 149 62.4
TAR362G0876 Trochodendron aralioides HOM05D006719 ORTHO05D007063 2.4e-09 66.2 126 70.6
Psat1g153440 Pisum sativum HOM05D006719 ORTHO05D007063 4.0e-09 65.5 143 65.7
THA.LOC104821772 Tarenaya hassleriana HOM05D006719 ORTHO05D007063 5.3e-09 65.1 139 55.4
Ca_01942_v3 Cicer arietinum L. HOM05D006719 ORTHO05D007063 6.9e-09 64.7 131 71.8
FAN12G0915 Fragaria x ananassa HOM05D006719 ORTHO05D007063 9.0e-09 64.3 124 73.4
Peaxi162Scf00024g00041 Petunia axillaris HOM05D006719 ORTHO05D007063 1.2e-08 63.9 143 62.2
Sp7g14160 Schrenkiella parvula HOM05D006719 ORTHO05D007063 1.2e-08 63.9 147 63.9
FAN17G0015 Fragaria x ananassa HOM05D006719 ORTHO05D007063 2.0e-08 63.2 160 37.5
Peaxi162Scf00534g00017 Petunia axillaris HOM05D006719 ORTHO05D007063 2.6e-08 62.8 150 34.0
RcHm_v2.0_Chr4g0422101 Rosa chinensis HOM05D006719 ORTHO05D007063 3.4e-08 62.4 144 64.6
SGA_v2.0_scaffold147G36286 Striga asiatica HOM05D006719 ORTHO05D007063 4.5e-08 62.0 56 66.1
ECA233G1326 Erigeron canadensis HOM05D006719 ORTHO05D007063 7.6e-08 61.2 105 71.4
TAR365G1095 Trochodendron aralioides HOM05D006719 ORTHO05D007063 9.9e-08 60.8 141 68.1
Thhalv10026485m.g Eutrema salsugineum HOM05D006719 ORTHO05D007063 1.3e-07 60.5 146 61.0
Nn3g21430 Nelumbo nucifera HOM05D006719 ORTHO05D007063 1.3e-07 60.5 144 63.9
Phvul.009G247500 Phaseolus vulgaris HOM05D006719 ORTHO05D007063 1.3e-07 60.5 148 66.2
Aa31LG10G6320 Aethionema arabicum HOM05D006719 ORTHO05D007063 2.2e-07 59.7 147 63.3
MBI19_g20884_MAGBIO Magnolia biondii HOM05D006719 ORTHO05D007063 2.2e-07 59.7 166 55.4
Actinidia01465 Actinidia chinensis HOM05D006719 ORTHO05D007063 2.9e-07 59.3 65 61.5
Aqoxy2G03000 Aquilegia oxysepala HOM05D000520 ORTHO05D000399 2.9e-07 59.3 56 57.1
PSO170G6252 Papaver somniferum HOM05D006719 ORTHO05D007063 2.9e-07 59.3 141 64.5
PSO210G7501 Papaver somniferum HOM05D006719 ORTHO05D007063 2.9e-07 59.3 141 67.4
THA.LOC104820261 Tarenaya hassleriana HOM05D006719 ORTHO05D007063 2.9e-07 59.3 135 68.1
CANSAT78G1100 Cannabis sativa HOM05D006719 ORTHO05D007063 3.8e-07 58.9 148 68.2
ClCG05G006040 Citrullus lanatus HOM05D006719 ORTHO05D007063 4.9e-07 58.5 156 66.7
CsaV3_3G014580 Cucumis sativus L. HOM05D006719 ORTHO05D007063 6.4e-07 58.2 152 65.8
AL7G39510 Arabidopsis lyrata HOM05D006719 ORTHO05D007063 8.4e-07 57.8 146 66.4
Peaxi162Scf00024g00231 Petunia axillaris HOM05D006719 ORTHO05D007063 8.4e-07 57.8 125 68.0
SalBow2G1281 Salvia bowleyana HOM05D006719 ORTHO05D007063 8.4e-07 57.8 48 66.7
Glyma.15G147300 Glycine max HOM05D006719 ORTHO05D007063 1.1e-06 57.4 152 65.8
Dinv29768 Davidia involucrata HOM05D001303 ORTHO05D001129 1.4e-06 57.0 129 62.8
MELO3C006659.2 Cucumis melo HOM05D006719 ORTHO05D007063 3.2e-06 55.8 152 65.1
Hund20562 Selenicereus undatus HOM05D006719 ORTHO05D007063 4.2e-06 55.5 55 60.0
FAN07G2874 Fragaria x ananassa HOM05D006719 ORTHO05D007063 5.5e-06 55.1 156 35.9
Lalb_Chr15g0083521 Lupinus albus HOM05D006719 ORTHO05D007063 7.1e-06 54.7 152 65.8


User provided reference genes

Program Settings