Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.15G004200 Manihot esculenta HOM05D007370 ORTHO05D009394 2.2e-257 891.7 440 100.0
Potri.010G145700 Populus trichocarpa HOM05D007370 ORTHO05D009394 3.8e-188 661.8 424 76.4
CiPaw.01G138600 Carya illinoinensis HOM05D007370 ORTHO05D009394 5.1e-177 624.8 419 71.4
Atru.chr4.3000 Acer truncatum HOM05D007370 ORTHO05D009394 1.1e-176 623.6 421 72.7
Prupe.1G117500 Prunus persica HOM05D007370 ORTHO05D009394 1.3e-172 610.1 427 68.4
Haze_01298 Corylus avellana HOM05D007370 ORTHO05D009394 2.9e-172 609.0 401 73.8
FvH4_4g19730 Fragaria vesca HOM05D007370 ORTHO05D009394 3.2e-171 605.5 421 71.3
Dinv15168 Davidia involucrata HOM05D007370 ORTHO05D009394 4.2e-171 605.1 421 70.8
FAN07G1244 Fragaria x ananassa HOM05D007370 ORTHO05D009394 1.9e-168 596.3 424 70.3
Duzib052G0732 Durio zibethinus HOM05D007370 ORTHO05D009394 1.6e-167 593.2 420 70.0
Rhsim02G0003800 Rhododendron simsii HOM05D007370 ORTHO05D009394 6.9e-166 587.8 425 69.4
RcHm_v2.0_Chr4g0425231 Rosa chinensis HOM05D007370 ORTHO05D009394 9.0e-166 587.4 422 70.4
Thecc.04G300700 Theobroma cacao HOM05D007370 ORTHO05D009394 1.5e-165 586.6 419 69.5
TAR362G0601 Trochodendron aralioides HOM05D007370 ORTHO05D009394 2.0e-165 586.3 430 68.1
COL.COLO4_34615 Corchorus olitorius HOM05D007370 ORTHO05D009394 7.6e-165 584.3 419 69.7
MD16G1154200 Malus domestica HOM05D007370 ORTHO05D009394 6.5e-164 581.3 429 67.6
DCAR_002511 Daucus carota HOM05D007370 ORTHO05D009394 7.1e-163 577.8 422 68.2
Glyma.09G035700 Glycine max HOM05D007370 ORTHO05D009394 1.6e-162 576.6 392 71.7
PGR142G3192 Punica granatum HOM05D007370 ORTHO05D009394 3.5e-162 575.5 420 68.1
Gohir.A01G034400 Gossypium hirsutum HOM05D007370 ORTHO05D009394 4.6e-162 575.1 426 66.7
Lj6g0027049 Lotus japonicus HOM05D007370 ORTHO05D009394 1.0e-161 573.9 396 71.7
Medtr2g034140 Medicago truncatula HOM05D007370 ORTHO05D009394 3.0e-161 572.4 426 68.1
VMungo0540G1057 Vigna mungo HOM05D007370 ORTHO05D009394 6.3e-159 564.7 398 69.6
Eucgr.A00294 Eucalyptus grandis HOM05D007370 ORTHO05D009394 2.4e-158 562.8 423 67.1
Phvul.006G118000 Phaseolus vulgaris HOM05D007370 ORTHO05D009394 9.0e-158 560.8 416 66.8
TPR.G27253 Trifolium pratense HOM05D007370 ORTHO05D009394 2.0e-157 559.7 406 70.9
Gorai.002G030100 Gossypium raimondii HOM05D007370 ORTHO05D009394 3.4e-157 558.9 448 63.4
MBI18_g37561_MAGBIO Magnolia biondii HOM05D007370 ORTHO05D009394 2.2e-156 556.2 434 64.3
Sed0008389 Sechium edule HOM05D007370 ORTHO05D009394 2.2e-156 556.2 429 66.9
Psat1g161680 Pisum sativum HOM05D007370 ORTHO05D009394 5.0e-156 555.1 424 67.5
Nn6g33643 Nelumbo nucifera HOM05D007370 ORTHO05D009394 6.5e-156 554.7 415 67.5
CsaV3_6G022350 Cucumis sativus L. HOM05D007370 ORTHO05D009394 8.5e-156 554.3 424 67.5
Sc13g0006460 Simmondsia chinensis HOM05D007370 ORTHO05D009394 9.4e-155 550.8 420 65.2
Lalb_Chr20g0120861 Lupinus albus HOM05D007370 ORTHO05D009394 1.8e-153 546.6 401 68.8
QL06p012270 Quercus lobata HOM05D007370 ORTHO05D009394 3.0e-153 545.8 358 74.9
Sabra10G0112300 Salix brachista HOM05D007370 ORTHO05D009394 2.0e-152 543.1 346 76.0
arahy.Tifrunner.gnm1.ann1.HMTG6S Arachis hypogaea HOM05D007370 ORTHO05D009394 7.4e-152 541.2 401 68.6
EL10Ac3g05507 Beta vulgaris HOM05D007370 ORTHO05D009394 1.3e-151 540.4 436 63.8
arahy.Tifrunner.gnm1.ann1.VHF2FI Arachis hypogaea HOM05D007370 ORTHO05D009394 2.2e-151 539.7 398 68.6
Sopen12g033950 Solanum pennellii HOM05D007370 ORTHO05D009394 4.8e-151 538.5 420 63.1
Cc03_g00820 Coffea canephora HOM05D007370 ORTHO05D009394 8.2e-151 537.7 421 63.9
Migut.G00060 Erythranthe guttata HOM05D007370 ORTHO05D009394 4.5e-149 531.9 425 62.4
Lj6A691G74 Lonicera japonica HOM05D007370 ORTHO05D009394 1.7e-148 530.0 440 62.0
PGSC0003DMG400004697 Solanum tuberosum HOM05D007370 ORTHO05D009394 1.1e-147 527.3 420 61.9
Solyc12g099270.2 Solanum lycopersicum HOM05D007370 ORTHO05D009394 9.4e-147 524.2 421 62.7
CAN.G484.61 Capsicum annuum HOM05D007370 ORTHO05D009394 2.7e-146 522.7 420 61.9
ATR0693G166 Amborella trichopoda HOM05D007370 ORTHO05D009394 3.7e-143 512.3 388 65.2
Peaxi162Scf00120g00023 Petunia axillaris HOM05D007370 ORTHO05D009394 8.2e-143 511.1 392 64.5
ECA248G2723 Erigeron canadensis HOM05D007370 ORTHO05D009394 4.1e-142 508.8 378 66.7
HanXRQChr01g0030981 Helianthus annuus HOM05D007370 ORTHO05D009394 5.3e-142 508.4 394 65.0
SalBow8G4515 Salvia bowleyana HOM05D007370 ORTHO05D009394 1.0e-140 504.2 400 62.5
AUR62039281 Chenopodium quinoa HOM05D007370 ORTHO05D009394 5.5e-139 498.4 426 61.7
FAN12G3716 Fragaria x ananassa HOM05D007370 ORTHO05D009394 5.5e-139 498.4 421 61.8
Nitab4.5_0002294g0020 Nicotiana tabacum HOM05D007370 ORTHO05D009394 5.5e-139 498.4 413 61.3
Nitab4.5_0002150g0160 Nicotiana tabacum HOM05D007370 ORTHO05D009394 8.8e-137 491.1 413 60.8
TWI09G1560 Tripterygium wilfordii HOM05D007370 ORTHO05D009394 4.8e-135 485.3 422 60.7
Zm00001eb356360 Zea mays HOM05D007370 ORTHO05D009394 1.6e-133 480.3 378 64.0
AUR62016207 Chenopodium quinoa HOM05D007370 ORTHO05D009394 3.5e-133 479.2 403 62.5
unitig_37.g12412 Utricularia gibba HOM05D007370 ORTHO05D009394 3.5e-133 479.2 417 57.8
CDE08G1199 Ceratophyllum demersum HOM05D007370 ORTHO05D009394 3.8e-132 475.7 424 57.5
arahy.Tifrunner.gnm1.ann1.DXY8A4 Arachis hypogaea HOM05D007370 ORTHO05D009394 8.0e-130 468.0 457 56.7
Os05g0157300 Oryza sativa ssp. japonica HOM05D007370 ORTHO05D009394 8.0e-130 468.0 377 61.5
SEGI_11896 Sequoiadendron giganteum HOM05D007370 ORTHO05D009394 8.8e-129 464.5 411 56.9
Lsat_1_v5_gn_1_41060 Lactuca sativa HOM05D007370 ORTHO05D009394 1.0e-124 451.1 346 64.2
CSS0048431 Camellia sinensis var. sinensis HOM05D007370 ORTHO05D009394 9.4e-123 444.5 306 70.9
Gohir.D01G023538 Gossypium hirsutum HOM05D007370 ORTHO05D009394 1.4e-118 430.6 305 69.2
Hund11933 Selenicereus undatus HOM05D007370 ORTHO05D009394 3.8e-116 422.5 453 53.6
Ah.04g156700 Amaranthus hybridus HOM05D007370 ORTHO05D009394 3.3e-115 419.5 429 52.4
MELO3C021271.2 Cucumis melo HOM05D007370 ORTHO05D009394 9.5e-115 417.9 307 69.1
vmacro15182 Vaccinium macrocarpon HOM05D007370 ORTHO05D009394 3.0e-113 412.9 291 68.0
arahy.Tifrunner.gnm1.ann1.CV4FMG Arachis hypogaea HOM05D007370 ORTHO05D009394 2.8e-111 406.4 339 62.2
Cpa.g.sc9.57 Carica papaya HOM05D007370 ORTHO05D009394 4.3e-107 392.5 292 67.1
Peaxi162Scf01160g00001 Petunia axillaris HOM05D007370 ORTHO05D009394 2.4e-102 376.7 391 54.0
Pp3c14_3570 Physcomitrium patens HOM05D007370 ORTHO05D009394 1.7e-100 370.5 422 49.5
ClCG06G004600 Citrullus lanatus HOM05D007370 ORTHO05D009394 1.4e-94 350.9 446 48.0
CBR_g50285 Chara braunii HOM05D007370 ORTHO05D009394 7.1e-94 348.6 399 45.6
Mapoly0007s0102 Marchantia polymorpha HOM05D007370 ORTHO05D009394 3.0e-92 343.2 306 54.9
AagrBONN_evm.TU.Sc2ySwM_228.2788 Anthoceros agrestis HOM05D007370 ORTHO05D009394 4.9e-87 325.9 367 47.1
SGA_v2.0_scaffold104G30077 Striga asiatica HOM05D007370 ORTHO05D009394 1.9e-83 313.9 418 43.5
GSVIVG01034991001 Vitis vinifera HOM05D007370 ORTHO05D009394 3.3e-83 313.2 205 72.2
Eucgr.A00046 Eucalyptus grandis HOM05D007370 ORTHO05D009394 1.1e-81 308.1 198 73.7
HPP92_027782 Vanilla planifolia HOM05D007370 ORTHO05D009394 3.4e-80 303.1 251 59.8
Mapoly0007s0137 Marchantia polymorpha HOM05D007370 ORTHO05D009394 3.4e-72 276.6 419 39.1
SMO145G0205 Selaginella moellendorffii HOM05D007370 ORTHO05D009394 1.1e-70 271.6 397 40.3
Ca_03237_v3 Cicer arietinum L. HOM05D007370 ORTHO05D009394 6.9e-65 252.3 202 63.9
QL06p020122 Quercus lobata HOM05D007370 ORTHO05D009394 9.0e-65 251.9 277 51.6
Hund11975 Selenicereus undatus HOM05D007370 ORTHO05D009394 2.9e-63 246.9 239 55.2
Glyma.15G140501 Glycine max HOM05D007370 ORTHO05D009394 1.1e-49 201.8 187 56.7
vmacro15183 Vaccinium macrocarpon HOM05D007370 ORTHO05D009394 4.2e-46 189.9 134 70.9
arahy.Tifrunner.gnm1.ann1.Y96K7L Arachis hypogaea HOM05D007370 ORTHO05D009394 2.6e-40 170.6 166 51.8
Ca_00981_v3 Cicer arietinum L. HOM05D007370 ORTHO05D009394 5.9e-40 169.5 129 69.8
MD13G1153900 Malus domestica HOM05D007370 ORTHO05D009394 2.9e-31 140.6 109 67.0
CDE02G4406 Ceratophyllum demersum HOM05D007370 ORTHO05D009394 5.0e-31 139.8 113 60.2
HPP92_027781 Vanilla planifolia HOM05D007370 ORTHO05D009394 1.8e-28 131.3 129 53.5
Oeu001173.1 Olea europaea HOM05D007370 ORTHO05D009394 1.5e-27 128.3 125 51.2
Actinidia14258 Actinidia chinensis HOM05D001648 ORTHO05D001657 1.1e-19 102.1 110 45.5
Mapoly0007s0289 Marchantia polymorpha HOM05D007370 ORTHO05D009394 2.0e-19 101.3 130 43.1
Mapoly0252s0002 Marchantia polymorpha HOM05D007370 ORTHO05D009394 2.0e-19 101.3 130 43.1
Glyma.18G184250 Glycine max HOM05D007370 ORTHO05D009394 8.2e-18 95.9 83 56.6
arahy.Tifrunner.gnm1.ann1.ZDLG37 Arachis hypogaea HOM05D004051 ORTHO05D004480 5.0e-15 86.7 77 63.6
CDE02G2864 Ceratophyllum demersum HOM05D007370 ORTHO05D009394 3.2e-14 84.0 88 52.3
Potri.008G105401 Populus trichocarpa HOM05D007370 ORTHO05D009394 1.6e-13 81.6 69 60.9
FAN12G2956 Fragaria x ananassa HOM05D007370 ORTHO05D009394 2.1e-13 81.3 61 67.2
MD13G1154300 Malus domestica HOM05D007370 ORTHO05D009394 2.2e-10 71.2 42 85.7
SEGI_23244 Sequoiadendron giganteum HOM05D007370 ORTHO05D009394 1.7e-07 61.6 63 49.2


User provided reference genes

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