Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.14G174400 Manihot esculenta HOM05D007669 ORTHO05D009624 0.0e+00 1610.5 804 100.0
Potri.018G133300 Populus trichocarpa HOM05D007669 ORTHO05D009624 1.3e-271 939.9 742 64.0
Sabra18G0113000 Salix brachista HOM05D007669 ORTHO05D009624 4.2e-262 908.3 747 61.7
Cfa013482 Carpinus fangiana HOM05D007669 ORTHO05D009624 2.7e-253 879.0 793 57.6
Ciclev10007518m.g Citrus clementina HOM05D007669 ORTHO05D009624 4.4e-235 818.5 754 55.4
Dinv25484 Davidia involucrata HOM05D007669 ORTHO05D009624 4.4e-235 818.5 804 54.6
TWI34G1867 Tripterygium wilfordii HOM05D007669 ORTHO05D009624 1.9e-230 803.1 779 54.7
GSVIVG01029262001 Vitis vinifera HOM05D007669 ORTHO05D009624 6.1e-229 798.1 787 55.1
QL11p009976 Quercus lobata HOM05D007669 ORTHO05D009624 9.2e-225 784.3 910 49.1
Gohir.D05G246300 Gossypium hirsutum HOM05D007669 ORTHO05D009624 3.0e-207 726.1 714 52.7
Gohir.A05G248100 Gossypium hirsutum HOM05D007669 ORTHO05D009624 3.3e-206 722.6 714 52.8
Gorai.009G262500 Gossypium raimondii HOM05D007669 ORTHO05D009624 4.3e-206 722.2 714 52.4
Duzib177G0349 Durio zibethinus HOM05D007669 ORTHO05D009624 1.1e-198 697.6 755 50.6
MD13G1236300 Malus domestica HOM05D007669 ORTHO05D009624 3.6e-197 692.6 776 49.6
FAN07G2841 Fragaria x ananassa HOM05D007669 ORTHO05D009624 2.6e-195 686.4 775 47.4
ClCG06G013870 Citrullus lanatus HOM05D007669 ORTHO05D009624 1.7e-194 683.7 755 49.5
Medtr4g126780 Medicago truncatula HOM05D007669 ORTHO05D009624 2.2e-194 683.3 764 49.0
Sed0018351 Sechium edule HOM05D007669 ORTHO05D009624 4.2e-193 679.1 752 49.3
RcHm_v2.0_Chr4g0398451 Rosa chinensis HOM05D007669 ORTHO05D009624 3.5e-192 676.0 775 47.0
FAN17G0559 Fragaria x ananassa HOM05D007669 ORTHO05D009624 1.7e-191 673.7 775 46.8
arahy.Tifrunner.gnm1.ann1.YI9GDS Arachis hypogaea HOM05D007669 ORTHO05D009624 1.1e-190 671.0 755 48.2
TPR.G5403 Trifolium pratense HOM05D007669 ORTHO05D009624 1.1e-190 671.0 764 47.5
Lj4g0015120 Lotus japonicus HOM05D007669 ORTHO05D009624 7.3e-190 668.3 782 47.3
Rhsim01G0007900 Rhododendron simsii HOM05D007669 ORTHO05D009624 1.6e-189 667.2 840 46.4
arahy.Tifrunner.gnm1.ann1.BQQL35 Arachis hypogaea HOM05D007669 ORTHO05D009624 8.1e-189 664.8 759 47.7
CANSAT11G2077 Cannabis sativa HOM05D007669 ORTHO05D009624 4.5e-187 659.1 793 49.4
Phvul.003G138500 Phaseolus vulgaris HOM05D007669 ORTHO05D009624 2.2e-186 656.8 793 46.9
Lalb_Chr07g0180781 Lupinus albus HOM05D007669 ORTHO05D009624 1.9e-185 653.7 786 47.5
Ca_21270_v3 Cicer arietinum L. HOM05D007669 ORTHO05D009624 2.1e-184 650.2 840 43.8
PGR044G0001 Punica granatum HOM05D007669 ORTHO05D009624 6.0e-184 648.7 770 46.1
HanXRQChr09g0244441 Helianthus annuus HOM05D007669 ORTHO05D009624 1.0e-183 647.9 766 46.2
Cc06_g12900 Coffea canephora HOM05D007669 ORTHO05D009624 2.4e-180 636.7 793 45.8
Nn8g40420 Nelumbo nucifera HOM05D007669 ORTHO05D009624 1.2e-179 634.4 779 48.0
Prupe.1G068100 Prunus persica HOM05D007669 ORTHO05D009624 4.5e-179 632.5 611 52.0
Migut.K00227 Erythranthe guttata HOM05D007669 ORTHO05D009624 6.0e-176 622.1 779 45.3
Oeu025206.1 Olea europaea HOM05D007669 ORTHO05D009624 6.0e-176 622.1 716 48.2
Cpa.g.sc115.51 Carica papaya HOM05D007669 ORTHO05D009624 2.6e-171 606.7 717 49.1
FAN22G2123 Fragaria x ananassa HOM05D007669 ORTHO05D009624 8.4e-170 601.7 611 49.6
CiPaw.08G030700 Carya illinoinensis HOM05D007669 ORTHO05D009624 2.1e-168 597.0 594 55.1
EL10Ac8g19326 Beta vulgaris HOM05D007669 ORTHO05D009624 6.7e-167 592.0 769 45.0
SalBow1G4073 Salvia bowleyana HOM05D007669 ORTHO05D009624 5.7e-166 589.0 765 43.8
Lj2g0020468 Lotus japonicus HOM05D007669 ORTHO05D009624 1.6e-165 587.4 782 44.4
Aqoxy7G02932 Aquilegia oxysepala HOM05D007669 ORTHO05D009624 1.1e-164 584.7 775 43.7
Ah.09g232160 Amaranthus hybridus HOM05D007669 ORTHO05D009624 3.2e-161 573.2 761 44.4
MELO3C017409.2 Cucumis melo HOM05D007669 ORTHO05D009624 3.2e-161 573.2 720 47.2
Lsat_1_v5_gn_7_54021 Lactuca sativa HOM05D007669 ORTHO05D009624 2.1e-160 570.5 746 43.8
PSO170G1866 Papaver somniferum HOM05D007669 ORTHO05D009624 4.6e-160 569.3 778 42.3
PSO063G2993 Papaver somniferum HOM05D007669 ORTHO05D009624 2.3e-159 567.0 780 42.1
AUR62031310 Chenopodium quinoa HOM05D007669 ORTHO05D009624 4.5e-155 552.7 764 43.2
FvH4_4g06530 Fragaria vesca HOM05D007669 ORTHO05D009624 4.5e-155 552.7 550 50.9
vmacro13101 Vaccinium macrocarpon HOM05D007669 ORTHO05D009624 6.5e-154 548.9 783 43.3
VMungo1215G2771 Vigna mungo HOM05D007669 ORTHO05D009624 7.2e-153 545.4 958 36.7
Hund06703 Selenicereus undatus HOM05D007669 ORTHO05D009624 3.3e-150 536.6 830 40.6
SGA_v2.0_scaffold17G07944 Striga asiatica HOM05D007669 ORTHO05D009624 9.7e-150 535.0 790 41.0
Sc13g0008100 Simmondsia chinensis HOM05D007669 ORTHO05D009624 6.1e-144 515.8 760 41.1
ATR0580G240 Amborella trichopoda HOM05D007669 ORTHO05D009624 1.1e-140 505.0 801 40.0
Glyma.17G056500 Glycine max HOM05D007669 ORTHO05D009624 3.1e-140 503.4 597 47.6
Eucgr.D01099 Eucalyptus grandis HOM05D007669 ORTHO05D009624 1.2e-139 501.5 525 48.2
Psat4g013920 Pisum sativum HOM05D007669 ORTHO05D009624 1.5e-137 494.6 574 47.9
ECA240G0205 Erigeron canadensis HOM05D007669 ORTHO05D009624 1.3e-133 481.5 680 40.4
Hma1.2p1_0726F.1_g208990 Hydrangea macrophylla HOM05D007669 ORTHO05D009624 8.0e-128 462.2 550 49.1
MBI16_g09333_MAGBIO Magnolia biondii HOM05D007669 ORTHO05D009624 3.9e-114 416.8 516 46.9
Zm00001eb432590 Zea mays HOM05D007669 ORTHO05D009624 8.6e-114 415.6 813 35.3
CsaV3_1G032070 Cucumis sativus L. HOM05D007669 ORTHO05D009624 8.0e-112 409.1 394 54.8
Eucgr.D01111 Eucalyptus grandis HOM05D007669 ORTHO05D009624 4.1e-108 396.7 770 34.4
HPP92_010780 Vanilla planifolia HOM05D007669 ORTHO05D009624 9.8e-102 375.6 498 41.2
AUR62027394 Chenopodium quinoa HOM05D007669 ORTHO05D009624 4.9e-101 373.2 437 46.5
Eucgr.L01386 Eucalyptus grandis HOM05D007669 ORTHO05D009624 1.3e-98 365.2 400 47.5
DCAR_017992 Daucus carota HOM05D007669 ORTHO05D009624 8.9e-95 352.4 499 41.3
Glyma.13G102601 Glycine max HOM05D007669 ORTHO05D009624 3.4e-94 350.5 452 43.6
SEGI_13081 Sequoiadendron giganteum HOM05D007669 ORTHO05D009624 1.0e-82 312.4 592 34.1
CDE02G1706 Ceratophyllum demersum HOM05D007669 ORTHO05D009624 1.7e-74 285.0 765 29.4
Pp3c9_5530 Physcomitrium patens HOM05D007669 ORTHO05D009624 2.1e-67 261.5 800 28.0
FAN12G2799 Fragaria x ananassa HOM05D007669 ORTHO05D009624 3.0e-66 257.7 249 50.2
AagrBONN_evm.TU.Sc2ySwM_117.3295 Anthoceros agrestis HOM05D007669 ORTHO05D009624 1.3e-64 252.3 782 28.6
Haze_22064 Corylus avellana HOM05D007669 ORTHO05D009624 3.8e-61 240.7 200 57.5
Mapoly0147s0035 Marchantia polymorpha HOM05D007669 ORTHO05D009624 5.7e-57 226.9 839 26.6
SMO356G0293 Selaginella moellendorffii HOM05D007669 ORTHO05D009624 6.9e-55 219.9 552 30.4
SEGI_05703 Sequoiadendron giganteum HOM05D007669 ORTHO05D009624 9.0e-55 219.5 378 35.4
COL.COLO4_25058 Corchorus olitorius HOM05D007669 ORTHO05D009624 1.7e-45 188.7 166 55.4
Eucgr.D01101 Eucalyptus grandis HOM05D007669 ORTHO05D009624 2.5e-44 184.9 202 46.5
Psat7g062600 Pisum sativum HOM05D007669 ORTHO05D009624 1.8e-42 178.7 146 58.2
DCAR_017991 Daucus carota HOM05D007669 ORTHO05D009624 9.1e-39 166.4 201 42.3
Glyma.13G102550 Glycine max HOM05D007669 ORTHO05D009624 1.1e-33 149.4 280 38.9
Haze_22063 Corylus avellana HOM05D007669 ORTHO05D009624 4.2e-28 131.0 178 52.2
Lj3A156T43 Lonicera japonica HOM05D007669 ORTHO05D009624 1.5e-17 95.9 169 42.0
Psat4g139360 Pisum sativum HOM05D007669 ORTHO05D009624 1.7e-16 92.4 90 50.0
CiPaw.08G030600 Carya illinoinensis HOM05D007669 ORTHO05D009624 4.5e-14 84.3 78 44.9
COL.COLO4_25059 Corchorus olitorius HOM05D007669 ORTHO05D009624 1.0e-13 83.2 169 39.1
PRCOL_00006584 Prasinoderma coloniale HOM05D024043 ORTHO05D009624 9.5e-12 76.6 158 37.3
SEGI_25409 Sequoiadendron giganteum HOM05D007669 ORTHO05D009624 2.7e-11 75.1 189 29.6
Cre07.g356600 Chlamydomonas reinhardtii HOM05D007669 ORTHO05D009624 6.1e-11 73.9 93 43.0
HPP92_010781 Vanilla planifolia HOM05D007669 ORTHO05D009624 8.8e-10 70.1 167 33.5
MCO10G383 Micromonas commoda HOM05D024043 ORTHO05D009624 2.0e-09 68.9 138 35.5
Os04g0659150 Oryza sativa ssp. japonica HOM05D007669 ORTHO05D009624 3.4e-09 68.2 166 29.5
PRCOL_00001814 Prasinoderma coloniale HOM05D007669 ORTHO05D009624 9.8e-09 66.6 139 34.5


User provided reference genes

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