Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.14G168500 Manihot esculenta HOM05D002209 ORTHO05D007926 3.4e-141 505.0 256 100.0
Potri.015G041800 Populus trichocarpa HOM05D002209 ORTHO05D007926 6.7e-121 437.6 250 86.4
Sabra15G0055300 Salix brachista HOM05D002209 ORTHO05D007926 4.4e-120 434.9 248 86.7
Sabra15G0061600 Salix brachista HOM05D002209 ORTHO05D007926 4.2e-115 418.3 283 76.3
Thecc.06G020700 Theobroma cacao HOM05D002209 ORTHO05D007926 1.4e-102 376.7 244 75.4
TWI81G0293 Tripterygium wilfordii HOM05D002209 ORTHO05D007926 7.0e-102 374.4 253 73.5
CsaV3_1G007020 Cucumis sativus L. HOM05D002209 ORTHO05D007926 1.7e-100 369.8 250 73.2
Duzib160G0876 Durio zibethinus HOM05D002209 ORTHO05D007926 2.9e-100 369.0 244 74.6
CSS0012934 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D007926 5.0e-100 368.2 257 74.3
CSS0018698 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D007926 5.0e-100 368.2 257 74.3
MELO3C002120.2 Cucumis melo HOM05D002209 ORTHO05D007926 8.5e-100 367.5 250 72.8
Gohir.D06G123100 Gossypium hirsutum HOM05D002209 ORTHO05D007926 1.1e-99 367.1 248 75.0
Hma1.2p1_1257F.1_g270850 Hydrangea macrophylla HOM05D002209 ORTHO05D007926 1.5e-99 366.7 253 74.7
ClCG04G010780 Citrullus lanatus HOM05D002209 ORTHO05D007926 1.9e-99 366.3 246 74.0
Gorai.010G143200 Gossypium raimondii HOM05D002209 ORTHO05D007926 2.5e-99 365.9 248 74.6
Atru.chr9.948 Acer truncatum HOM05D002209 ORTHO05D007926 5.5e-99 364.8 248 74.2
PGR083G0394 Punica granatum HOM05D002209 ORTHO05D007926 9.4e-99 364.0 244 74.2
Ciclev10009263m.g Citrus clementina HOM05D002209 ORTHO05D007926 2.1e-98 362.8 254 71.7
Peaxi162Scf00683g10026 Petunia axillaris HOM05D002209 ORTHO05D007926 2.1e-98 362.8 252 74.2
Phvul.002G327300 Phaseolus vulgaris HOM05D002209 ORTHO05D007926 2.1e-98 362.8 253 73.1
Nitab4.5_0012369g0010 Nicotiana tabacum HOM05D002209 ORTHO05D007926 2.7e-98 362.5 251 73.3
Sc10g0009340 Simmondsia chinensis HOM05D002209 ORTHO05D007926 4.7e-98 361.7 245 71.8
Gohir.A06G114800 Gossypium hirsutum HOM05D002209 ORTHO05D007926 6.1e-98 361.3 248 74.2
Cfa019698 Carpinus fangiana HOM05D002209 ORTHO05D007926 1.0e-97 360.5 249 72.7
Ah.11g045280 Amaranthus hybridus HOM05D002209 ORTHO05D007926 4.0e-97 358.6 249 71.1
Sed0021446 Sechium edule HOM05D002209 ORTHO05D007926 5.2e-97 358.2 249 71.1
VMungo0251G3506 Vigna mungo HOM05D002209 ORTHO05D007926 5.2e-97 358.2 253 72.7
Glyma.05G243600 Glycine max HOM05D002209 ORTHO05D007926 8.8e-97 357.5 254 72.4
THA.LOC104820370 Tarenaya hassleriana HOM05D002209 ORTHO05D007926 1.2e-96 357.1 247 70.4
TAR622G1089 Trochodendron aralioides HOM05D002209 ORTHO05D007926 1.5e-96 356.7 249 74.3
Actinidia18911 Actinidia chinensis HOM05D002209 ORTHO05D007926 1.3e-95 353.6 248 73.4
Lalb_Chr09g0330531 Lupinus albus HOM05D002209 ORTHO05D007926 1.7e-95 353.2 253 70.0
Lsat_1_v5_gn_3_114081 Lactuca sativa HOM05D002209 ORTHO05D007926 2.2e-95 352.8 247 73.3
AT3G18165 Arabidopsis thaliana HOM05D002209 ORTHO05D007926 2.8e-95 352.4 245 68.6
C05p47920 Brassica napus HOM05D002209 ORTHO05D007926 2.8e-95 352.4 252 68.3
Carub.0003s1789 Capsella rubella HOM05D002209 ORTHO05D007926 2.8e-95 352.4 245 69.0
Sopen00g010550 Solanum pennellii HOM05D002209 ORTHO05D007926 2.8e-95 352.4 248 72.6
BcaC09g48772 Brassica carinata HOM05D002209 ORTHO05D007926 3.7e-95 352.1 249 68.3
BolC1t04568H Brassica oleracea HOM05D002209 ORTHO05D007926 3.7e-95 352.1 249 68.3
BcaB04g20790 Brassica carinata HOM05D002209 ORTHO05D007926 4.8e-95 351.7 244 68.4
Glyma.08G051400 Glycine max HOM05D002209 ORTHO05D007926 4.8e-95 351.7 253 71.9
Nitab4.5_0000150g0080 Nicotiana tabacum HOM05D002209 ORTHO05D007926 6.3e-95 351.3 254 70.1
AL3G31340 Arabidopsis lyrata HOM05D002209 ORTHO05D007926 8.3e-95 350.9 245 68.6
BcaC05g28661 Brassica carinata HOM05D002209 ORTHO05D007926 8.3e-95 350.9 252 67.9
BolC5t33504H Brassica oleracea HOM05D002209 ORTHO05D007926 8.3e-95 350.9 252 67.9
PGSC0003DMG400005659 Solanum tuberosum HOM05D002209 ORTHO05D007926 8.3e-95 350.9 247 72.5
EL10Ac5g11521 Beta vulgaris HOM05D002209 ORTHO05D007926 1.1e-94 350.5 249 68.7
CARHR093490 Cardamine hirsuta HOM05D002209 ORTHO05D007926 1.1e-94 350.5 246 69.1
Medtr8g106740 Medicago truncatula HOM05D002209 ORTHO05D007926 1.4e-94 350.1 248 71.0
C01p46070 Brassica napus HOM05D002209 ORTHO05D007926 1.8e-94 349.7 249 67.5
BraA05t21994Z Brassica rapa HOM05D002209 ORTHO05D007926 1.8e-94 349.7 252 67.9
A05p31590 Brassica napus HOM05D002209 ORTHO05D007926 2.4e-94 349.4 252 67.9
Prupe.5G229800 Prunus persica HOM05D002209 ORTHO05D007926 2.4e-94 349.4 254 68.5
Actinidia35109 Actinidia chinensis HOM05D002209 ORTHO05D007926 3.1e-94 349.0 248 72.2
CiPaw.15G139100 Carya illinoinensis HOM05D002209 ORTHO05D007926 7.0e-94 347.8 246 72.0
ECA240G0871 Erigeron canadensis HOM05D002209 ORTHO05D007926 7.0e-94 347.8 251 70.9
A01p36240 Brassica napus HOM05D002209 ORTHO05D007926 9.1e-94 347.4 245 67.8
BraA01t03699Z Brassica rapa HOM05D002209 ORTHO05D007926 9.1e-94 347.4 245 67.8
Thhalv10021375m.g Eutrema salsugineum HOM05D002209 ORTHO05D007926 9.1e-94 347.4 249 66.7
Rhsim12G0139900 Rhododendron simsii HOM05D002209 ORTHO05D007926 9.1e-94 347.4 255 71.0
Lj4g0023570 Lotus japonicus HOM05D002209 ORTHO05D007926 1.2e-93 347.1 247 71.3
Eucgr.B00853 Eucalyptus grandis HOM05D002209 ORTHO05D007926 1.6e-93 346.7 250 68.8
Sp3g16280 Schrenkiella parvula HOM05D002209 ORTHO05D007926 4.5e-93 345.1 246 67.5
MSTRG.22939 Avicennia marina HOM05D002209 ORTHO05D007926 1.0e-92 344.0 254 70.9
arahy.Tifrunner.gnm1.ann1.X5TZ4V Arachis hypogaea HOM05D002209 ORTHO05D007926 6.6e-92 341.3 250 70.4
CAN.G1129.32 Capsicum annuum HOM05D002209 ORTHO05D007926 6.6e-92 341.3 251 70.5
TPR.G12761 Trifolium pratense HOM05D002209 ORTHO05D007926 6.6e-92 341.3 252 68.3
CANSAT80G1708 Cannabis sativa HOM05D002209 ORTHO05D007926 1.1e-91 340.5 251 70.5
CANSAT80G2078 Cannabis sativa HOM05D002209 ORTHO05D007926 1.1e-91 340.5 251 70.5
QL10p027511 Quercus lobata HOM05D002209 ORTHO05D007926 3.3e-91 339.0 253 68.4
arahy.Tifrunner.gnm1.ann1.IWL1UH Arachis hypogaea HOM05D002209 ORTHO05D007926 7.2e-91 337.8 253 69.6
Nitab4.5_0001158g0030 Nicotiana tabacum HOM05D002209 ORTHO05D007926 1.2e-90 337.0 235 73.6
arahy.Tifrunner.gnm1.ann1.7LX2IS Arachis hypogaea HOM05D002209 ORTHO05D007926 3.6e-90 335.5 253 68.8
arahy.Tifrunner.gnm1.ann1.A2QZNW Arachis hypogaea HOM05D002209 ORTHO05D007926 6.1e-90 334.7 250 69.2
MD00G1160500 Malus domestica HOM05D002209 ORTHO05D007926 1.8e-89 333.2 250 66.8
SGA_v2.0_scaffold21G09613 Striga asiatica HOM05D002209 ORTHO05D007926 2.3e-89 332.8 246 68.7
PSO478G0876 Papaver somniferum HOM05D002209 ORTHO05D007926 4.0e-89 332.0 244 70.1
PSO017G1461 Papaver somniferum HOM05D002209 ORTHO05D007926 8.9e-89 330.9 245 69.8
SalBow5G1692 Salvia bowleyana HOM05D002209 ORTHO05D007926 1.2e-88 330.5 240 69.6
Aa31LG8G4990 Aethionema arabicum HOM05D002209 ORTHO05D004761 2.0e-88 329.7 237 67.1
Migut.L01913 Erythranthe guttata HOM05D002209 ORTHO05D007926 2.0e-88 329.7 247 68.0
Solyc03g119010.3 Solanum lycopersicum HOM05D002209 ORTHO05D007926 2.6e-88 329.3 235 72.8
Aqoxy3G00431 Aquilegia oxysepala HOM05D002209 ORTHO05D007926 5.4e-86 321.6 254 65.4
AUR62033751 Chenopodium quinoa HOM05D002209 ORTHO05D007926 1.2e-85 320.5 254 65.0
Lalb_Chr16g0387151 Lupinus albus HOM05D002209 ORTHO05D007926 1.9e-83 313.2 222 71.6
CDE08G0043 Ceratophyllum demersum HOM05D002209 ORTHO05D007926 5.6e-83 311.6 237 66.2
MBI13_g00575_MAGBIO Magnolia biondii HOM05D002209 ORTHO05D007926 5.6e-83 311.6 246 66.3
Ca_14628_v3 Cicer arietinum L. HOM05D002209 ORTHO05D007926 8.0e-82 307.8 246 66.7
MD14G1233600 Malus domestica HOM05D002209 ORTHO05D007926 1.8e-81 306.6 234 65.8
HanXRQChr03g0090991 Helianthus annuus HOM05D002209 ORTHO05D007926 5.2e-81 305.1 232 67.2
Nn2g14536 Nelumbo nucifera HOM05D002209 ORTHO05D007926 5.2e-81 305.1 241 66.0
Hund02335 Selenicereus undatus HOM05D002209 ORTHO05D007926 2.6e-80 302.8 245 64.1
GSVIVG01008385001 Vitis vinifera HOM05D002209 ORTHO05D007926 3.7e-79 298.9 198 75.8
DCAR_011381 Daucus carota HOM05D002209 ORTHO05D007926 1.9e-78 296.6 245 61.6
HPP92_026682 Vanilla planifolia HOM05D002209 ORTHO05D007926 1.2e-77 293.9 236 64.0
RcHm_v2.0_Chr7g0178821 Rosa chinensis HOM05D002209 ORTHO05D007926 1.6e-77 293.5 249 63.1
unitig_27.g24963 Utricularia gibba HOM05D002209 ORTHO05D007926 1.7e-76 290.0 241 63.1
Zm00001eb128260 Zea mays HOM05D002209 ORTHO05D007926 2.3e-76 289.7 247 60.3
vmacro16426 Vaccinium macrocarpon HOM05D002209 ORTHO05D007926 5.0e-76 288.5 321 53.3
Ca_17220_v3 Cicer arietinum L. HOM05D002209 ORTHO05D004761 1.9e-75 286.6 246 63.4
FAN13G0553 Fragaria x ananassa HOM05D002209 ORTHO05D007926 4.3e-75 285.4 249 62.2
FvH4_5g17030 Fragaria vesca HOM05D002209 ORTHO05D007926 6.2e-74 281.6 251 62.2
FAN08G0602 Fragaria x ananassa HOM05D002209 ORTHO05D007926 6.2e-74 281.6 248 61.3
COL.COLO4_07530 Corchorus olitorius HOM05D002209 ORTHO05D007926 2.3e-73 279.6 185 74.1
FAN18G2854 Fragaria x ananassa HOM05D002209 ORTHO05D007926 4.0e-73 278.9 241 63.1
ATR0068G069 Amborella trichopoda HOM05D002209 ORTHO05D007926 1.2e-72 277.3 236 59.7
Cc04_g06640 Coffea canephora HOM05D002209 ORTHO05D007926 2.0e-72 276.6 196 70.9
Lj9A422G65 Lonicera japonica HOM05D002209 ORTHO05D007926 3.5e-69 265.8 206 68.9
Mapoly0110s0002 Marchantia polymorpha HOM05D002209 ORTHO05D007926 3.3e-67 259.2 241 53.9
Dinv13547 Davidia involucrata HOM05D002209 ORTHO05D007926 3.6e-66 255.8 258 55.8
AagrBONN_evm.TU.Sc2ySwM_344.2039 Anthoceros agrestis HOM05D002209 ORTHO05D007926 1.2e-61 240.7 233 52.4
Pp3c9_17380 Physcomitrium patens HOM05D002209 ORTHO05D007926 1.2e-61 240.7 241 51.0
Oeu014368.1 Olea europaea HOM05D002209 ORTHO05D007926 3.0e-60 236.1 164 71.3
AUR62029954 Chenopodium quinoa HOM05D002209 ORTHO05D007926 6.6e-60 235.0 190 62.6
CBR_g46893 Chara braunii HOM05D006221 ORTHO05D007759 4.3e-51 205.7 230 49.1
Haze_18790 Corylus avellana HOM05D002209 ORTHO05D004761 1.1e-49 201.1 138 74.6
Hma1.2p1_1257F.1_g270860 Hydrangea macrophylla HOM05D002209 ORTHO05D007926 4.0e-49 199.1 138 73.2
HPP92_018005 Vanilla planifolia HOM05D002209 ORTHO05D007926 9.0e-49 198.0 158 60.8
SMO339G0064 Selaginella moellendorffii HOM05D002209 ORTHO05D007926 2.6e-48 196.4 234 44.4
Psat7g003920 Pisum sativum HOM05D002209 ORTHO05D007926 3.8e-47 192.6 142 69.7
SEGI_33728 Sequoiadendron giganteum HOM05D002209 ORTHO05D007926 2.0e-40 170.2 132 65.2
MCO11G869 Micromonas commoda HOM05D002209 ORTHO05D007926 2.1e-29 133.7 226 35.0
Ca_17308_v3 Cicer arietinum L. HOM05D002209 ORTHO05D007926 1.0e-28 131.3 84 78.6
Psat7g003960 Pisum sativum HOM05D002209 ORTHO05D007926 2.5e-27 126.7 87 73.6
Cre17.g697350 Chlamydomonas reinhardtii HOM05D002209 ORTHO05D007926 3.3e-27 126.3 216 35.2
AUR62029953 Chenopodium quinoa HOM05D002209 ORTHO05D007926 2.6e-24 116.7 82 70.7
C05p44850 Brassica napus HOM05D002209 ORTHO05D007926 3.8e-23 112.8 79 68.4
BolC5t33212H Brassica oleracea HOM05D002209 ORTHO05D007926 3.8e-23 112.8 79 68.4
Ca_29797_v3 Cicer arietinum L. HOM05D002209 ORTHO05D007926 2.0e-16 90.5 64 73.4
A10p11050 Brassica napus HOM05D002209 ORTHO05D033214 4.5e-16 89.4 58 69.0
BraA10t43197Z Brassica rapa HOM05D002209 ORTHO05D033214 3.1e-09 66.6 47 63.8
BolC6t38528H Brassica oleracea HOM05D002209 ORTHO05D033214 2.0e-08 63.9 46 60.9


User provided reference genes

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