Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.14G168432 Manihot esculenta HOM05D000003 ORTHO05D000006 4.6e-91 337.8 161 100.0
Manes.18G036550 Manihot esculenta HOM05D000003 ORTHO05D000006 4.6e-27 125.2 155 40.0
Manes.18G025104 Manihot esculenta HOM05D000003 ORTHO05D000006 3.3e-25 119.0 141 39.7
Manes.01G203601 Manihot esculenta HOM05D000003 ORTHO05D000006 5.3e-23 111.7 130 40.8
Manes.12G082116 Manihot esculenta HOM05D000003 ORTHO05D000006 1.0e-21 107.5 158 36.7
Rhsim03G0112800 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.4e-20 103.6 160 39.4
Rhsim02G0183800 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.1e-17 94.0 144 40.3
PSO447G0142 Papaver somniferum HOM05D000003 ORTHO05D000004 9.7e-17 90.9 158 33.5
Rhsim01G0109500 Rhododendron simsii HOM05D000003 ORTHO05D000004 6.9e-15 84.7 153 33.3
Rhsim08G0178900 Rhododendron simsii HOM05D000003 ORTHO05D000006 1.5e-14 83.6 158 30.4
Rhsim08G0091800 Rhododendron simsii HOM05D000003 ORTHO05D000004 3.4e-14 82.4 153 32.7
Rhsim11G0149500 Rhododendron simsii HOM05D000003 ORTHO05D000006 2.9e-13 79.3 155 31.6
Manes.18G001501 Manihot esculenta HOM05D000003 ORTHO05D000006 8.5e-13 77.8 133 30.1
SGA_v2.0_scaffold67G22780 Striga asiatica HOM05D000003 ORTHO05D000006 1.9e-12 76.6 155 34.2
PSO170G3085 Papaver somniferum HOM05D000003 ORTHO05D000004 7.2e-12 74.7 155 29.0
PSO111G0003 Papaver somniferum HOM05D000003 ORTHO05D000006 9.4e-12 74.3 140 30.0
RcHm_v2.0_Chr5g0027201 Rosa chinensis HOM05D000003 ORTHO05D000006 3.6e-11 72.4 153 27.5
Gohir.1Z049693 Gossypium hirsutum HOM05D000003 ORTHO05D000006 6.1e-11 71.6 158 30.4
Aa31LG9G15190 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.0e-10 70.9 140 29.3
Gohir.1Z049540 Gossypium hirsutum HOM05D000003 ORTHO05D000006 1.0e-10 70.9 156 28.8
Gohir.A09G000185 Gossypium hirsutum HOM05D000003 ORTHO05D000006 1.4e-10 70.5 156 28.2
Rhsim07G0115800 Rhododendron simsii HOM05D000003 ORTHO05D000126 1.4e-10 70.5 110 34.5
Rhsim05G0174100 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.8e-10 70.1 110 34.5
RhsimUnG0236900 Rhododendron simsii HOM05D000003 ORTHO05D000004 2.3e-10 69.7 158 27.8
Gohir.1Z049393 Gossypium hirsutum HOM05D000003 ORTHO05D000006 3.0e-10 69.3 156 28.2
Gohir.A07G054901 Gossypium hirsutum HOM05D000003 ORTHO05D000006 3.9e-10 68.9 156 29.5
PSO782G4220 Papaver somniferum HOM05D000003 ORTHO05D000004 3.9e-10 68.9 135 28.1
Aa31LG3G5250 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.2e-10 68.6 155 29.0
CANSAT64G0955 Cannabis sativa HOM05D000003 ORTHO05D000006 5.2e-10 68.6 160 28.1
PSO144G0123 Papaver somniferum HOM05D000003 ORTHO05D000004 5.2e-10 68.6 145 29.7
PSO675G5748 Papaver somniferum HOM05D000003 ORTHO05D000004 5.2e-10 68.6 149 30.2
C06p01420 Brassica napus HOM05D000003 ORTHO05D000006 6.7e-10 68.2 138 29.7
Gohir.A07G187699 Gossypium hirsutum HOM05D000003 ORTHO05D000006 6.7e-10 68.2 155 28.4
Nn4g25669 Nelumbo nucifera HOM05D000003 ORTHO05D000006 6.7e-10 68.2 148 29.7
Aa31sc808G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 8.8e-10 67.8 155 28.4
Aa31LG3G6430 Aethionema arabicum HOM05D000003 ORTHO05D000006 1.1e-09 67.4 163 29.4
BcaB07g32061 Brassica carinata HOM05D000003 ORTHO05D000006 1.1e-09 67.4 133 28.6
Rhsim02G0038900 Rhododendron simsii HOM05D000003 ORTHO05D000126 1.1e-09 67.4 157 29.9
Rhsim06G0055700 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.1e-09 67.4 109 33.0
PSO782G0304 Papaver somniferum HOM05D000003 ORTHO05D000006 1.5e-09 67.0 158 29.1
Rhsim01G0112200 Rhododendron simsii HOM05D000003 ORTHO05D000126 1.5e-09 67.0 157 29.9
Dinv11321 Davidia involucrata HOM05D000003 ORTHO05D000006 2.0e-09 66.6 145 31.0
Gohir.A09G031322 Gossypium hirsutum HOM05D000003 ORTHO05D000006 2.0e-09 66.6 156 26.9
Aa31LG6G3790 Aethionema arabicum HOM05D000003 ORTHO05D000006 3.3e-09 65.9 155 25.2
Rhsim09G0106200 Rhododendron simsii HOM05D000003 ORTHO05D000126 3.3e-09 65.9 156 28.8
Aa31LG1G7820 Aethionema arabicum HOM05D000003 ORTHO05D000006 4.4e-09 65.5 155 26.5
CANSAT56G2134 Cannabis sativa HOM05D000003 ORTHO05D000006 4.4e-09 65.5 161 26.1
Aa31sc427G30 Aethionema arabicum HOM05D000003 ORTHO05D000006 7.4e-09 64.7 157 27.4
Carub.0005s0877 Capsella rubella HOM05D000003 ORTHO05D000006 7.4e-09 64.7 154 27.3
Dinv17960 Davidia involucrata HOM05D000003 ORTHO05D000006 7.4e-09 64.7 160 26.2
Gohir.1Z049487 Gossypium hirsutum HOM05D000003 ORTHO05D000006 7.4e-09 64.7 149 29.5
Aa31LG6G7750 Aethionema arabicum HOM05D000003 ORTHO05D000004 9.7e-09 64.3 155 25.2
Gohir.A12G082922 Gossypium hirsutum HOM05D000003 ORTHO05D000006 9.7e-09 64.3 156 26.9
PSO675G7157 Papaver somniferum HOM05D000003 ORTHO05D000004 9.7e-09 64.3 137 26.3
Rhsim04G0047200 Rhododendron simsii HOM05D000003 ORTHO05D000004 9.7e-09 64.3 134 29.1
Gohir.1Z049387 Gossypium hirsutum HOM05D000003 ORTHO05D000006 1.3e-08 63.9 132 31.1
Aqoxy1G03380 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 1.7e-08 63.5 150 28.7
PSO541G4967 Papaver somniferum HOM05D000003 ORTHO05D000006 1.7e-08 63.5 154 28.6
SGA_v2.0_scaffold1G00690 Striga asiatica HOM05D000003 ORTHO05D000004 1.7e-08 63.5 154 31.8
Aa31LG8G11510 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.2e-08 63.2 160 27.5
PSO170G5204 Papaver somniferum HOM05D000003 ORTHO05D000006 3.7e-08 62.4 145 27.6
Rhsim01G0119200 Rhododendron simsii HOM05D000003 ORTHO05D000006 3.7e-08 62.4 109 31.2
Aa31LG5G20940 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.8e-08 62.0 155 25.8
Aa31sc199G20 Aethionema arabicum HOM05D000003 ORTHO05D000006 4.8e-08 62.0 136 27.2
CANSAT25G3889 Cannabis sativa HOM05D000003 ORTHO05D000006 4.8e-08 62.0 160 27.5
FvH4_6g22781 Fragaria vesca HOM05D000003 ORTHO05D000006 4.8e-08 62.0 156 27.6
Gohir.D05G293550 Gossypium hirsutum HOM05D000003 ORTHO05D000006 4.8e-08 62.0 139 26.6
Rhsim02G0229500 Rhododendron simsii HOM05D000003 ORTHO05D000006 6.3e-08 61.6 152 28.3
Aa31sc103G70 Aethionema arabicum HOM05D000003 ORTHO05D000006 8.2e-08 61.2 144 27.8
PSO541G3882 Papaver somniferum HOM05D000003 ORTHO05D000006 8.2e-08 61.2 140 30.0
Gohir.A09G031355 Gossypium hirsutum HOM05D000003 ORTHO05D000006 1.1e-07 60.8 156 24.4
TAR536G0010 Trochodendron aralioides HOM05D000003 ORTHO05D000006 1.1e-07 60.8 137 28.5
Aqoxy6G02265 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 1.4e-07 60.5 156 28.2
Aqoxy6G02269 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 1.4e-07 60.5 156 28.2
Aqoxy1G02664 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 1.8e-07 60.1 152 29.6
Carub.0002s0960 Capsella rubella HOM05D000003 ORTHO05D000006 1.8e-07 60.1 156 28.8
Gohir.1Z049349 Gossypium hirsutum HOM05D000003 ORTHO05D000006 1.8e-07 60.1 156 23.7
Gohir.A09G031377 Gossypium hirsutum HOM05D000003 ORTHO05D000006 1.8e-07 60.1 138 29.0
Aqoxy2G02194 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 2.4e-07 59.7 153 30.1
BcaC05g25993 Brassica carinata HOM05D000003 ORTHO05D000006 3.1e-07 59.3 108 33.3
FvH4_5g08801 Fragaria vesca HOM05D000003 ORTHO05D000004 3.1e-07 59.3 138 29.0
PSO732G0326 Papaver somniferum HOM05D000003 ORTHO05D000006 3.1e-07 59.3 138 30.4
Aqoxy3G02165 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 4.1e-07 58.9 140 31.4
PSO675G1492 Papaver somniferum HOM05D000003 ORTHO05D000006 4.1e-07 58.9 135 25.9
Rhsim01G0274800 Rhododendron simsii HOM05D000003 ORTHO05D000006 4.1e-07 58.9 136 30.9
Rhsim03G0108700 Rhododendron simsii HOM05D000003 ORTHO05D000006 4.1e-07 58.9 153 28.8
Gohir.1Z049493 Gossypium hirsutum HOM05D000003 ORTHO05D000006 5.3e-07 58.5 156 24.4
Gohir.1Z049687 Gossypium hirsutum HOM05D000003 ORTHO05D000006 5.3e-07 58.5 138 26.1
PSO541G0013 Papaver somniferum HOM05D000003 ORTHO05D000004 5.3e-07 58.5 107 30.8
Rhsim08G0169600 Rhododendron simsii HOM05D000003 ORTHO05D000004 5.3e-07 58.5 148 26.4
Aa31LG4G12660 Aethionema arabicum HOM05D000003 ORTHO05D000004 7.0e-07 58.2 133 24.8
BcaC06g36207 Brassica carinata HOM05D000003 ORTHO05D015459 7.0e-07 58.2 112 28.6
BraA07t30522Z Brassica rapa HOM05D000003 ORTHO05D000006 7.0e-07 58.2 149 25.5
Gohir.A02G127801 Gossypium hirsutum HOM05D000003 ORTHO05D000006 7.0e-07 58.2 140 29.3
PSO017G6289 Papaver somniferum HOM05D000003 ORTHO05D000004 7.0e-07 58.2 135 29.6
PSO541G4355 Papaver somniferum HOM05D000003 ORTHO05D000004 7.0e-07 58.2 138 29.7
PSO782G4600 Papaver somniferum HOM05D000003 ORTHO05D000004 7.0e-07 58.2 142 29.6
BcaB01g02268 Brassica carinata HOM05D000003 ORTHO05D000411 9.1e-07 57.8 142 31.0
BcaC05g27684 Brassica carinata HOM05D000003 ORTHO05D000006 9.1e-07 57.8 139 26.6
PSO386G0016 Papaver somniferum HOM05D000003 ORTHO05D000006 9.1e-07 57.8 145 26.9
Rhsim02G0107700 Rhododendron simsii HOM05D000048 ORTHO05D000006 9.1e-07 57.8 158 26.6
Rhsim02G0238600 Rhododendron simsii HOM05D000003 ORTHO05D000006 9.1e-07 57.8 158 28.5
Aqoxy5G01921 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 1.2e-06 57.4 149 29.5
Carub.0016s0002 Capsella rubella HOM05D000003 ORTHO05D000006 1.2e-06 57.4 159 29.6
Dinv36946 Davidia involucrata HOM05D000003 ORTHO05D000006 1.2e-06 57.4 111 30.6
Aa31LG10G9400 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.6e-06 57.0 160 26.9
Aa31sc153G50 Aethionema arabicum HOM05D000003 ORTHO05D000411 1.6e-06 57.0 149 24.8
Aa31sc174G20 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.6e-06 57.0 154 27.3
Aqoxy1G03976 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 1.6e-06 57.0 153 30.1
BcaC06g36381 Brassica carinata HOM05D000003 ORTHO05D000006 1.6e-06 57.0 152 28.9
Rhsim02G0152800 Rhododendron simsii HOM05D000003 ORTHO05D000006 1.6e-06 57.0 153 26.8
Aa31LG1G5100 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.0e-06 56.6 79 32.9
Aa31sc1394G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.0e-06 56.6 159 27.0
Dinv11369 Davidia involucrata HOM05D000003 ORTHO05D000126 2.0e-06 56.6 165 28.5
Dinv38129 Davidia involucrata HOM05D000003 ORTHO05D000006 2.0e-06 56.6 111 29.7
QL08p004291 Quercus lobata HOM05D000003 ORTHO05D000006 2.0e-06 56.6 157 26.1
Aqoxy2G00806 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.6e-06 56.2 153 30.7
PSO017G0212 Papaver somniferum HOM05D000003 ORTHO05D000004 2.6e-06 56.2 159 27.0
PSO170G6005 Papaver somniferum HOM05D000003 ORTHO05D000004 2.6e-06 56.2 152 27.0
PSO832G3393 Papaver somniferum HOM05D000003 ORTHO05D000004 2.6e-06 56.2 99 32.3
Rhsim01G0092300 Rhododendron simsii HOM05D000003 ORTHO05D000006 2.6e-06 56.2 155 28.4
Aa31LG2G15580 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.5e-06 55.8 160 26.2
PSO210G1229 Papaver somniferum HOM05D000003 ORTHO05D000004 3.5e-06 55.8 68 38.2
PSO210G5640 Papaver somniferum HOM05D000003 ORTHO05D000004 3.5e-06 55.8 148 28.4
Rhsim07G0213000 Rhododendron simsii HOM05D000003 ORTHO05D008945 3.5e-06 55.8 153 27.5
Atru.chr2.1764 Acer truncatum HOM05D000003 ORTHO05D000006 4.5e-06 55.5 158 27.2
Aa31sc27G30 Aethionema arabicum HOM05D000003 ORTHO05D000411 5.9e-06 55.1 165 27.3
CiPaw.08G122600 Carya illinoinensis HOM05D000003 ORTHO05D000006 5.9e-06 55.1 146 25.3
FvH4_5g31282 Fragaria vesca HOM05D000003 ORTHO05D000004 5.9e-06 55.1 139 26.6
PSO170G4923 Papaver somniferum HOM05D000003 ORTHO05D000006 5.9e-06 55.1 159 27.7
Rhsim12G0079800 Rhododendron simsii HOM05D000003 ORTHO05D000006 5.9e-06 55.1 134 28.4
SGA_v2.0_scaffold30G12507 Striga asiatica HOM05D011952 ORTHO05D000006 5.9e-06 55.1 125 29.6
Dinv13289 Davidia involucrata HOM05D000003 ORTHO05D000006 7.7e-06 54.7 125 30.4
Gohir.1Z049350 Gossypium hirsutum HOM05D000003 ORTHO05D000006 7.7e-06 54.7 139 27.3
Gohir.1Z049485 Gossypium hirsutum HOM05D000003 ORTHO05D000006 7.7e-06 54.7 156 23.1


User provided reference genes

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