Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.14G166201 Manihot esculenta HOM05D006161 ORTHO05D007483 4.2e-88 328.2 186 100.0
Potri.012G022200 Populus trichocarpa HOM05D006161 ORTHO05D007483 1.4e-62 243.4 156 89.7
Actinidia28057 Actinidia chinensis HOM05D004981 ORTHO05D007483 2.2e-60 236.1 155 86.5
Sabra15G0004000 Salix brachista HOM05D006161 ORTHO05D007483 2.8e-60 235.7 174 81.0
Rhsim05G0107700 Rhododendron simsii HOM05D006161 ORTHO05D007483 3.7e-60 235.3 156 85.9
TWI14G1433 Tripterygium wilfordii HOM05D006161 ORTHO05D007483 8.2e-60 234.2 156 85.9
Atru.chr12.1730 Acer truncatum HOM05D006161 ORTHO05D007483 1.1e-59 233.8 154 87.0
Oeu047362.1 Olea europaea HOM05D006161 ORTHO05D007483 1.1e-59 233.8 158 83.5
Ciclev10029442m.g Citrus clementina HOM05D006161 ORTHO05D007483 1.4e-59 233.4 160 84.4
Dinv09035 Davidia involucrata HOM05D006161 ORTHO05D007483 5.3e-59 231.5 155 85.8
PGR142G0837 Punica granatum HOM05D006161 ORTHO05D007483 3.4e-58 228.8 160 80.0
Prupe.8G061800 Prunus persica HOM05D006161 ORTHO05D007483 4.5e-58 228.4 150 84.7
vmacro19927 Vaccinium macrocarpon HOM05D006161 ORTHO05D007483 4.5e-58 228.4 155 82.6
MSTRG.20298 Avicennia marina HOM05D006161 ORTHO05D007483 5.9e-58 228.0 158 81.0
Eucgr.I02667 Eucalyptus grandis HOM05D006161 ORTHO05D007483 1.3e-57 226.9 151 84.1
SalBow6G1080 Salvia bowleyana HOM05D006161 ORTHO05D007483 1.3e-57 226.9 158 82.9
SalBow6G1732 Salvia bowleyana HOM05D006161 ORTHO05D007483 1.3e-57 226.9 158 82.9
Nitab4.5_0003858g0050 Nicotiana tabacum HOM05D006161 ORTHO05D007483 1.7e-57 226.5 156 84.0
GSVIVG01003100001 Vitis vinifera HOM05D006161 ORTHO05D007483 1.7e-57 226.5 151 84.8
Nitab4.5_0002576g0040 Nicotiana tabacum HOM05D006161 ORTHO05D007483 2.2e-57 226.1 156 84.0
SGA_v2.0_scaffold14G07119 Striga asiatica HOM05D006161 ORTHO05D007483 2.9e-57 225.7 162 80.9
RcHm_v2.0_Chr3g0485521 Rosa chinensis HOM05D006161 ORTHO05D007483 3.8e-57 225.3 151 86.1
CSS0044873 Camellia sinensis var. sinensis HOM05D006161 ORTHO05D007483 5.0e-57 224.9 144 88.9
CAN.G523.74 Capsicum annuum HOM05D006161 ORTHO05D007483 5.0e-57 224.9 153 81.7
MD05G1163200 Malus domestica HOM05D006161 ORTHO05D007483 5.0e-57 224.9 152 84.9
PGSC0003DMG400012586 Solanum tuberosum HOM05D006161 ORTHO05D007483 5.0e-57 224.9 156 85.3
arahy.Tifrunner.gnm1.ann1.6D7HHK Arachis hypogaea HOM05D006161 ORTHO05D007483 6.5e-57 224.6 149 85.2
arahy.Tifrunner.gnm1.ann1.75PVJ4 Arachis hypogaea HOM05D006161 ORTHO05D007483 6.5e-57 224.6 149 85.2
FvH4_1g26050 Fragaria vesca HOM05D006161 ORTHO05D007483 1.4e-56 223.4 151 85.4
FAN26G2610 Fragaria x ananassa HOM05D006161 ORTHO05D007483 1.4e-56 223.4 151 85.4
MD10G1152800 Malus domestica HOM05D006161 ORTHO05D007483 2.5e-56 222.6 152 83.6
Peaxi162Scf00001g00019 Petunia axillaris HOM05D006161 ORTHO05D007483 4.2e-56 221.9 160 81.2
FAN23G0154 Fragaria x ananassa HOM05D006161 ORTHO05D007483 9.4e-56 220.7 151 84.1
FAN23G2587 Fragaria x ananassa HOM05D006161 ORTHO05D007483 9.4e-56 220.7 151 84.1
FAN19G1889 Fragaria x ananassa HOM05D006161 ORTHO05D007483 2.1e-55 219.5 152 83.6
MD05G1163000 Malus domestica HOM05D006161 ORTHO05D007483 2.1e-55 219.5 152 83.6
BcaB02g09779 Brassica carinata HOM05D006161 ORTHO05D007483 2.7e-55 219.2 144 83.3
C03p62070 Brassica napus HOM05D006161 ORTHO05D007483 2.7e-55 219.2 144 82.6
BolC3t18468H Brassica oleracea HOM05D006161 ORTHO05D007483 2.7e-55 219.2 144 83.3
Thhalv10005060m.g Eutrema salsugineum HOM05D006161 ORTHO05D007483 2.7e-55 219.2 144 83.3
FAN28G0148 Fragaria x ananassa HOM05D006161 ORTHO05D007483 2.7e-55 219.2 150 84.7
Lalb_Chr10g0097811 Lupinus albus HOM05D006161 ORTHO05D007483 2.7e-55 219.2 156 80.1
THA.LOC104799966 Tarenaya hassleriana HOM05D006161 ORTHO05D007483 2.7e-55 219.2 152 81.6
Aa31LG1G17750 Aethionema arabicum HOM05D006161 ORTHO05D007483 4.7e-55 218.4 144 82.6
Sopen01g047660 Solanum pennellii HOM05D006161 ORTHO05D007483 4.7e-55 218.4 156 81.4
MSTRG.16580 Avicennia marina HOM05D006161 ORTHO05D007483 1.0e-54 217.2 155 79.4
AT5G64180 Arabidopsis thaliana HOM05D006161 ORTHO05D007483 1.4e-54 216.9 144 81.9
EL10Ac9g21470 Beta vulgaris HOM05D006161 ORTHO05D007483 1.4e-54 216.9 151 81.5
Lsat_1_v5_gn_5_107281 Lactuca sativa HOM05D006161 ORTHO05D007483 1.4e-54 216.9 141 85.1
AL8G41450 Arabidopsis lyrata HOM05D006161 ORTHO05D007483 1.8e-54 216.5 144 81.9
CsaV3_7G006450 Cucumis sativus L. HOM05D006161 ORTHO05D007483 1.8e-54 216.5 147 80.3
BraA09t36505Z Brassica rapa HOM05D006161 ORTHO05D007483 2.3e-54 216.1 148 79.7
A09p08560 Brassica napus HOM05D006161 ORTHO05D007483 3.0e-54 215.7 148 79.7
BraA06t26029Z Brassica rapa HOM05D006161 ORTHO05D007483 3.9e-54 215.3 149 80.5
MELO3C018647.2 Cucumis melo HOM05D006161 ORTHO05D007483 3.9e-54 215.3 147 80.3
Solyc01g105130.4 Solanum lycopersicum HOM05D006161 ORTHO05D007483 3.9e-54 215.3 161 77.6
Sp2g27240 Schrenkiella parvula HOM05D006161 ORTHO05D007483 5.1e-54 214.9 144 81.9
Hund06386 Selenicereus undatus HOM05D006161 ORTHO05D007483 5.1e-54 214.9 147 81.0
Sc18g0006920 Simmondsia chinensis HOM05D006161 ORTHO05D007483 6.7e-54 214.5 146 80.8
BolC9t53879H Brassica oleracea HOM05D006161 ORTHO05D007483 8.8e-54 214.2 148 79.1
Migut.B00613 Erythranthe guttata HOM05D006161 ORTHO05D007483 8.8e-54 214.2 155 80.6
Aqoxy3G03670 Aquilegia oxysepala HOM05D006161 ORTHO05D007483 2.0e-53 213.0 150 78.7
C09p09680 Brassica napus HOM05D006161 ORTHO05D007483 2.6e-53 212.6 148 78.4
Carub.0008s2497 Capsella rubella HOM05D006161 ORTHO05D007483 3.3e-53 212.2 142 81.7
CARHR278090 Cardamine hirsuta HOM05D006161 ORTHO05D007483 3.3e-53 212.2 144 80.6
AUR62013116 Chenopodium quinoa HOM05D006161 ORTHO05D007483 7.4e-53 211.1 151 78.8
MD00G1096800 Malus domestica HOM05D006161 ORTHO05D007483 7.4e-53 211.1 153 81.7
BcaC01g02675 Brassica carinata HOM05D006161 ORTHO05D007483 9.7e-53 210.7 144 80.6
Medtr4g094242 Medicago truncatula HOM05D006161 ORTHO05D007483 9.7e-53 210.7 143 80.4
CANSAT11G1086 Cannabis sativa HOM05D006161 ORTHO05D007483 1.3e-52 210.3 156 78.8
VMungo0251G3203 Vigna mungo HOM05D006161 ORTHO05D007483 3.7e-52 208.8 147 78.2
Sed0024565 Sechium edule HOM05D006161 ORTHO05D007483 4.8e-52 208.4 147 77.6
Lj5P240T24 Lonicera japonica HOM05D006161 ORTHO05D007483 6.3e-52 208.0 131 87.8
ECA234G1571 Erigeron canadensis HOM05D006161 ORTHO05D007483 8.2e-52 207.6 152 77.0
Psat7g098400 Pisum sativum HOM05D006161 ORTHO05D007483 8.2e-52 207.6 151 76.8
Glyma.05G117900 Glycine max HOM05D006161 ORTHO05D007483 1.8e-51 206.5 144 78.5
HanXRQChr10g0295861 Helianthus annuus HOM05D006161 ORTHO05D007483 1.8e-51 206.5 155 76.8
Cfa005604 Carpinus fangiana HOM05D006161 ORTHO05D007483 1.2e-50 203.8 151 79.5
PSO478G0074 Papaver somniferum HOM05D006161 ORTHO05D007483 2.0e-50 203.0 143 79.7
Glyma.08G072800 Glycine max HOM05D006161 ORTHO05D007483 2.6e-50 202.6 153 75.2
PSO017G6730 Papaver somniferum HOM05D006161 ORTHO05D007483 3.5e-50 202.2 143 79.7
TAR622G1105 Trochodendron aralioides HOM05D006161 ORTHO05D007483 3.5e-50 202.2 155 74.2
Phvul.002G208400 Phaseolus vulgaris HOM05D006161 ORTHO05D007483 5.9e-50 201.4 144 77.1
SHI16526 Sapria himalayana HOM05D006161 ORTHO05D007483 3.8e-49 198.7 150 73.3
CDE04G2984 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 1.4e-46 190.3 142 73.2
ATR0177G010 Amborella trichopoda HOM05D006161 ORTHO05D007483 1.8e-46 189.9 154 68.8
CiPaw.05G036100 Carya illinoinensis HOM05D006161 ORTHO05D007483 1.8e-46 189.9 156 75.0
Cc02_g21600 Coffea canephora HOM05D006161 ORTHO05D007483 1.8e-46 189.9 153 73.9
Os12g0502100 Oryza sativa ssp. japonica HOM05D006161 ORTHO05D007483 3.0e-46 189.1 140 71.4
A06p30900 Brassica napus HOM05D006161 ORTHO05D007483 6.3e-44 181.4 144 71.5
Cpa.g.sc42.64 Carica papaya HOM05D006161 ORTHO05D007483 6.3e-44 181.4 152 73.0
Lj4g0015467 Lotus japonicus HOM05D006161 ORTHO05D007483 1.8e-43 179.9 153 69.3
ClCG09G015360 Citrullus lanatus HOM05D006161 ORTHO05D007483 2.4e-43 179.5 159 68.6
unitig_8.g3487 Utricularia gibba HOM05D006161 ORTHO05D007483 7.7e-42 174.5 219 54.3
ECA236G0554 Erigeron canadensis HOM05D006161 ORTHO05D007483 1.7e-41 173.3 141 67.4
Sabra05G0140100 Salix brachista HOM05D006161 ORTHO05D007483 3.8e-41 172.2 116 87.1
Actinidia00265 Actinidia chinensis HOM05D006161 ORTHO05D007483 2.5e-40 169.5 152 68.4
Nn4g23459 Nelumbo nucifera HOM05D006161 ORTHO05D007483 5.5e-40 168.3 158 67.1
QL11p020678 Quercus lobata HOM05D006161 ORTHO05D007483 5.5e-40 168.3 111 87.4
Haze_10694 Corylus avellana HOM05D006161 ORTHO05D007483 2.1e-39 166.4 119 84.0
Gohir.A12G014900 Gossypium hirsutum HOM05D006161 ORTHO05D007483 3.0e-38 162.5 156 67.3
Potri.015G005600 Populus trichocarpa HOM05D006161 ORTHO05D007483 2.0e-37 159.8 160 65.0
Lj6g0024224 Lotus japonicus HOM05D006161 ORTHO05D007483 5.7e-37 158.3 153 64.1
TWI14G1282 Tripterygium wilfordii HOM05D006161 ORTHO05D007483 2.8e-36 156.0 177 59.3
CDE04G3544 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 4.8e-36 155.2 144 63.2
Ca_18349_v3 Cicer arietinum L. HOM05D006161 ORTHO05D007483 4.8e-36 155.2 156 62.2
Hma1.2p1_0704F.1_g206700 Hydrangea macrophylla HOM05D006161 ORTHO05D007483 9.1e-35 151.0 109 79.8
Mapoly0094s0011 Marchantia polymorpha HOM05D006161 ORTHO05D007483 7.7e-34 147.9 155 52.9
SGA_v2.0_scaffold11G05811 Striga asiatica HOM05D006161 ORTHO05D007483 7.7e-34 147.9 114 75.4
Duzib132G0386 Durio zibethinus HOM05D006161 ORTHO05D007483 1.3e-33 147.1 156 62.8
HPP92_024935 Vanilla planifolia HOM05D006161 ORTHO05D007483 6.5e-33 144.8 114 75.4
DCAR_001788 Daucus carota HOM05D006161 ORTHO05D007483 3.2e-32 142.5 119 70.6
AagrBONN_evm.TU.Sc2ySwM_117.171 Anthoceros agrestis HOM05D006161 ORTHO05D007483 7.2e-32 141.4 138 53.6
Thecc.02G139200 Theobroma cacao HOM05D006161 ORTHO05D007483 3.0e-30 136.0 154 60.4
Zm00001eb409430 Zea mays HOM05D006161 ORTHO05D007483 5.2e-30 135.2 103 71.8
Zm00001eb138120 Zea mays HOM05D006161 ORTHO05D007483 1.2e-29 134.0 110 70.0
Gohir.D12G015300 Gossypium hirsutum HOM05D006161 ORTHO05D007483 3.4e-29 132.5 156 58.3
Gorai.008G015400 Gossypium raimondii HOM05D006161 ORTHO05D007483 3.4e-29 132.5 156 58.3
CDE07G1624 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 1.1e-27 127.5 92 77.2
SMO116G0092 Selaginella moellendorffii HOM05D006161 ORTHO05D007483 3.1e-27 125.9 139 46.0
arahy.Tifrunner.gnm1.ann1.A44469 Arachis hypogaea HOM05D006161 ORTHO05D007483 4.2e-24 115.5 81 80.2
COL.COLO4_13985 Corchorus olitorius HOM05D006161 ORTHO05D007483 1.8e-22 110.2 126 58.7
arahy.Tifrunner.gnm1.ann1.HFW61Q Arachis hypogaea HOM05D006161 ORTHO05D007483 8.6e-17 91.3 66 72.7
Actinidia23993 Actinidia chinensis HOM05D006161 ORTHO05D007483 2.2e-12 76.6 128 46.1
Pp3c24_330 Physcomitrium patens HOM05D006161 ORTHO05D007483 3.7e-12 75.9 143 37.8
SalBow1G1176 Salvia bowleyana HOM05D007970 ORTHO05D009943 1.1e-11 74.3 44 88.6
TPR.G10469 Trifolium pratense HOM05D006161 ORTHO05D007483 6.0e-10 68.6 57 61.4
CBR_g70737 Chara braunii HOM05D006161 ORTHO05D007483 7.8e-10 68.2 153 33.3
VMungo0540G0821 Vigna mungo HOM05D006161 ORTHO05D007483 4.3e-08 62.4 42 73.8
Oeu011770.1 Olea europaea HOM05D004115 ORTHO05D005004 5.2e-06 55.5 42 66.7


User provided reference genes

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