Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.14G163433 Manihot esculenta HOM05D012182 ORTHO05D011238 5.7e-65 251.9 279 100.0
Manes.14G027972 Manihot esculenta HOM05D012182 ORTHO05D000014 3.2e-60 236.1 283 96.8
Manes.15G153266 Manihot esculenta HOM05D012182 ORTHO05D011238 4.0e-58 229.2 281 81.5
Manes.18G062550 Manihot esculenta HOM05D012182 ORTHO05D011238 1.8e-50 203.8 281 67.3
Manes.18G138854 Manihot esculenta HOM05D012182 ORTHO05D011238 2.0e-41 173.7 128 92.2
Manes.07G082254 Manihot esculenta HOM05D012182 ORTHO05D011238 1.4e-39 167.5 128 79.7
Manes.05G127901 Manihot esculenta HOM05D012182 ORTHO05D011238 9.2e-39 164.9 126 84.1
Manes.06G045801 Manihot esculenta HOM05D012182 ORTHO05D011238 8.6e-37 158.3 281 52.3
Manes.04G059132 Manihot esculenta HOM05D012182 ORTHO05D011238 2.6e-33 146.7 128 82.8
Manes.17G022697 Manihot esculenta HOM05D012182 ORTHO05D011238 6.4e-24 115.5 210 69.0
Manes.02G210140 Manihot esculenta HOM05D000023 ORTHO05D000014 5.4e-15 85.9 64 64.1
CSS0017579 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 2.7e-14 83.6 49 73.5
CSS0044422 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 2.7e-14 83.6 49 73.5
CSS0049353 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 2.7e-14 83.6 49 73.5
CSS0045728 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 3.5e-14 83.2 49 71.4
CSS0004804 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 6.0e-14 82.4 49 73.5
CSS0006701 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 6.0e-14 82.4 49 71.4
CSS0026734 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 7.8e-14 82.0 49 71.4
CSS0045108 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 3.9e-13 79.7 49 71.4
Dinv15899 Davidia involucrata HOM05D013973 ORTHO05D011238 3.3e-12 76.6 73 52.1
Dinv21131 Davidia involucrata HOM05D013973 ORTHO05D011238 7.3e-12 75.5 51 64.7
Manes.09G075056 Manihot esculenta HOM05D012182 ORTHO05D011238 5.2e-10 69.3 75 53.3
Dinv01017 Davidia involucrata HOM05D013973 ORTHO05D011238 6.8e-10 68.9 48 60.4
Hund20069 Selenicereus undatus HOM05D000023 ORTHO05D000014 2.0e-09 67.4 67 52.2
Hund03452 Selenicereus undatus HOM05D000185 ORTHO05D000014 2.6e-09 67.0 67 50.7
Hund10834 Selenicereus undatus HOM05D000023 ORTHO05D000014 2.6e-09 67.0 85 44.7
Hund00853 Selenicereus undatus HOM05D000023 ORTHO05D000014 3.4e-09 66.6 58 53.4
Duzib063G0003 Durio zibethinus HOM05D053098 ORTHO05D011238 4.4e-09 66.2 50 58.0
Hund04216 Selenicereus undatus HOM05D000023 ORTHO05D000014 4.4e-09 66.2 67 50.7
Hund09860 Selenicereus undatus HOM05D000023 ORTHO05D000014 4.4e-09 66.2 67 50.7
Hund26432 Selenicereus undatus HOM05D000023 ORTHO05D000014 4.4e-09 66.2 87 42.5
Actinidia31591 Actinidia chinensis HOM05D013973 ORTHO05D011238 5.8e-09 65.9 56 58.9
Gohir.D08G172950 Gossypium hirsutum HOM05D001165 ORTHO05D001347 5.8e-09 65.9 50 60.0
Gorai.005G223300 Gossypium raimondii HOM05D000023 ORTHO05D000014 5.8e-09 65.9 50 60.0
Gorai.010G071800 Gossypium raimondii HOM05D000023 ORTHO05D000014 5.8e-09 65.9 50 60.0
Gorai.011G148700 Gossypium raimondii HOM05D000023 ORTHO05D000014 5.8e-09 65.9 50 60.0
Hund08340 Selenicereus undatus HOM05D000023 ORTHO05D000014 5.8e-09 65.9 67 50.7
Rhsim05G0096600 Rhododendron simsii HOM05D000023 ORTHO05D000014 7.6e-09 65.5 79 43.0
Hund09827 Selenicereus undatus HOM05D000023 ORTHO05D000014 7.6e-09 65.5 67 49.3
Hund22679 Selenicereus undatus HOM05D000023 ORTHO05D000014 7.6e-09 65.5 67 49.3
Psat1g136240 Pisum sativum HOM05D008981 ORTHO05D011238 1.3e-08 64.7 77 44.2
Ah.03g144780 Amaranthus hybridus HOM05D000023 ORTHO05D000014 1.7e-08 64.3 116 34.5
Ah.06g187040 Amaranthus hybridus HOM05D012182 ORTHO05D011238 1.7e-08 64.3 51 54.9
Hund25537 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.7e-08 64.3 68 48.5
Hund01377 Selenicereus undatus HOM05D000023 ORTHO05D000014 2.2e-08 63.9 80 43.8
AUR62017483 Chenopodium quinoa HOM05D000023 ORTHO05D000014 2.9e-08 63.5 59 50.8
Psat7g035080 Pisum sativum HOM05D008981 ORTHO05D011238 3.8e-08 63.2 49 61.2
Gorai.002G161200 Gossypium raimondii HOM05D000023 ORTHO05D000014 4.9e-08 62.8 50 58.0
Gorai.007G113800 Gossypium raimondii HOM05D000023 ORTHO05D000014 4.9e-08 62.8 88 39.8
Gohir.A01G142850 Gossypium hirsutum HOM05D000023 ORTHO05D000014 6.4e-08 62.4 50 56.0
Hund17894 Selenicereus undatus HOM05D000023 ORTHO05D000014 6.4e-08 62.4 50 56.0
Hund04619 Selenicereus undatus HOM05D000023 ORTHO05D000014 8.4e-08 62.0 68 45.6
Hund18171 Selenicereus undatus HOM05D000023 ORTHO05D000014 8.4e-08 62.0 58 51.7
AUR62034279 Chenopodium quinoa HOM05D000023 ORTHO05D000014 1.4e-07 61.2 48 58.3
Gorai.011G164900 Gossypium raimondii HOM05D000023 ORTHO05D009195 1.4e-07 61.2 50 56.0
Gorai.007G179100 Gossypium raimondii HOM05D000023 ORTHO05D000014 1.9e-07 60.8 50 56.0
Hund17738 Selenicereus undatus HOM05D000023 ORTHO05D000014 2.4e-07 60.5 64 46.9
Hund15541 Selenicereus undatus HOM05D000023 ORTHO05D009195 3.2e-07 60.1 95 42.1
TPR.G32077 Trifolium pratense HOM05D000023 ORTHO05D000014 3.2e-07 60.1 48 58.3
Hund17666 Selenicereus undatus HOM05D000023 ORTHO05D000014 4.1e-07 59.7 96 35.4
Rhsim02G0219500 Rhododendron simsii HOM05D000023 ORTHO05D000014 5.4e-07 59.3 76 39.5
RhsimUnG0127700 Rhododendron simsii HOM05D000023 ORTHO05D000014 5.4e-07 59.3 76 39.5
RhsimUnG0234800 Rhododendron simsii HOM05D000023 ORTHO05D000014 5.4e-07 59.3 76 39.5
Hund09996 Selenicereus undatus HOM05D000023 ORTHO05D009195 7.1e-07 58.9 51 52.9
Hund19738 Selenicereus undatus HOM05D000023 ORTHO05D003407 9.2e-07 58.5 83 39.8
Psat2g165840 Pisum sativum HOM05D008981 ORTHO05D011238 1.2e-06 58.2 75 42.7
Psat1g141520 Pisum sativum HOM05D008981 ORTHO05D011238 1.6e-06 57.8 49 57.1
TPR.G40251 Trifolium pratense HOM05D008981 ORTHO05D011238 2.1e-06 57.4 49 59.2
Gorai.002G112900 Gossypium raimondii HOM05D000023 ORTHO05D000014 2.7e-06 57.0 50 52.0
Rhsim04G0137200 Rhododendron simsii HOM05D000023 ORTHO05D000014 2.7e-06 57.0 87 35.6
Hund22407 Selenicereus undatus HOM05D035887 ORTHO05D000014 2.7e-06 57.0 106 32.1
Hund00663 Selenicereus undatus HOM05D000023 ORTHO05D000014 4.6e-06 56.2 50 46.0
Hund13352 Selenicereus undatus HOM05D000023 ORTHO05D001383 4.6e-06 56.2 50 50.0
TAR500G0002 Trochodendron aralioides HOM05D000023 ORTHO05D000014 4.6e-06 56.2 61 50.8
Ah.13g070190 Amaranthus hybridus HOM05D013973 ORTHO05D011238 7.8e-06 55.5 42 57.1
Rhsim04G0084200 Rhododendron simsii HOM05D000023 ORTHO05D000014 7.8e-06 55.5 76 38.2
Hund23857 Selenicereus undatus HOM05D000023 ORTHO05D000014 7.8e-06 55.5 47 53.2


User provided reference genes

Program Settings