Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.14G161401 Manihot esculenta HOM05D004681 ORTHO05D005541 2.2e-172 609.0 328 100.0
Manes.04G060300 Manihot esculenta HOM05D004681 ORTHO05D005541 2.7e-167 592.0 328 97.3
TWI63G0533 Tripterygium wilfordii HOM05D004681 ORTHO05D005541 1.3e-124 450.3 325 70.5
Gohir.D08G028500 Gossypium hirsutum HOM05D004681 ORTHO05D005541 3.5e-122 442.2 324 66.7
Thecc.09G181200 Theobroma cacao HOM05D004681 ORTHO05D005541 3.5e-122 442.2 326 67.2
Gohir.A08G017900 Gossypium hirsutum HOM05D004681 ORTHO05D005541 2.3e-121 439.5 324 66.4
Cpa.g.sc95.29 Carica papaya HOM05D004681 ORTHO05D005541 1.9e-120 436.4 326 66.9
Gorai.004G025600 Gossypium raimondii HOM05D004681 ORTHO05D005541 1.2e-119 433.7 335 64.5
Potri.006G077100 Populus trichocarpa HOM05D004681 ORTHO05D005541 2.1e-119 433.0 328 72.9
CiPaw.07G195100 Carya illinoinensis HOM05D004681 ORTHO05D005541 3.6e-119 432.2 322 66.8
Cfa013431 Carpinus fangiana HOM05D004681 ORTHO05D005541 2.6e-117 426.0 326 66.6
Duzib168G0714 Durio zibethinus HOM05D004681 ORTHO05D005541 4.4e-117 425.2 320 67.2
Atru.chr7.819 Acer truncatum HOM05D004681 ORTHO05D005541 1.3e-116 423.7 319 66.8
Duzib170G0205 Durio zibethinus HOM05D004681 ORTHO05D005541 2.2e-116 422.9 330 65.2
Sabra06G0058400 Salix brachista HOM05D004681 ORTHO05D005541 1.9e-115 419.9 352 67.6
GSVIVG01010902001 Vitis vinifera HOM05D004681 ORTHO05D005541 2.4e-115 419.5 323 64.7
Ciclev10008916m.g Citrus clementina HOM05D004681 ORTHO05D005541 4.1e-115 418.7 328 66.2
QL12p032381 Quercus lobata HOM05D004681 ORTHO05D005541 6.0e-114 414.8 323 64.4
CiPaw.08G033800 Carya illinoinensis HOM05D004681 ORTHO05D005541 1.3e-113 413.7 317 65.3
PGR044G2653 Punica granatum HOM05D004681 ORTHO05D005541 2.5e-112 409.5 328 63.1
Eucgr.C00132 Eucalyptus grandis HOM05D004681 ORTHO05D005541 4.3e-112 408.7 329 63.8
SalBow7G3904 Salvia bowleyana HOM05D004681 ORTHO05D005541 7.3e-112 407.9 329 62.3
Actinidia06358 Actinidia chinensis HOM05D004681 ORTHO05D005541 3.4e-109 399.1 320 61.6
Actinidia22469 Actinidia chinensis HOM05D004681 ORTHO05D005541 5.8e-109 398.3 319 61.1
Solyc07g009320.3 Solanum lycopersicum HOM05D004681 ORTHO05D005541 7.6e-109 397.9 328 60.7
Sopen07g005070 Solanum pennellii HOM05D004681 ORTHO05D005541 1.3e-108 397.1 328 60.7
Potri.018G145508 Populus trichocarpa HOM05D004681 ORTHO05D005541 2.2e-108 396.4 292 68.8
RcHm_v2.0_Chr4g0400191 Rosa chinensis HOM05D004681 ORTHO05D005541 2.9e-108 396.0 320 62.8
THA.LOC104819968 Tarenaya hassleriana HOM05D004681 ORTHO05D005541 4.9e-108 395.2 322 65.8
PGSC0003DMG400008514 Solanum tuberosum HOM05D004681 ORTHO05D005541 1.1e-107 394.0 339 59.0
Dinv25404 Davidia involucrata HOM05D004681 ORTHO05D005541 1.4e-107 393.7 327 61.5
Prupe.1G079200 Prunus persica HOM05D004681 ORTHO05D005541 2.4e-107 392.9 317 62.5
ClCG06G013520 Citrullus lanatus HOM05D004681 ORTHO05D005541 5.4e-107 391.7 319 62.7
MSTRG.10452 Avicennia marina HOM05D004681 ORTHO05D005541 7.1e-107 391.3 325 60.6
SGA_v2.0_scaffold41G15864 Striga asiatica HOM05D004681 ORTHO05D005541 1.2e-106 390.6 329 62.0
BcaB03g16704 Brassica carinata HOM05D004681 ORTHO05D005541 2.1e-106 389.8 323 61.0
SalBow7G0268 Salvia bowleyana HOM05D004681 ORTHO05D005541 2.7e-106 389.4 345 58.6
Sp3g32480 Schrenkiella parvula HOM05D004681 ORTHO05D005541 2.7e-106 389.4 323 60.7
AL3G52840 Arabidopsis lyrata HOM05D004681 ORTHO05D005541 4.6e-106 388.7 324 60.8
MD13G1245600 Malus domestica HOM05D004681 ORTHO05D005541 6.0e-106 388.3 317 63.1
BcaB07g31622 Brassica carinata HOM05D004681 ORTHO05D005541 7.8e-106 387.9 323 60.1
BcaC04g22869 Brassica carinata HOM05D004681 ORTHO05D005541 1.0e-105 387.5 323 59.8
CANSAT11G1051 Cannabis sativa HOM05D004681 ORTHO05D005541 1.0e-105 387.5 319 64.3
A09p12190 Brassica napus HOM05D004681 ORTHO05D005541 5.1e-105 385.2 323 59.8
Dinv26443 Davidia involucrata HOM05D004681 ORTHO05D005541 1.9e-104 383.3 299 64.9
Thhalv10022785m.g Eutrema salsugineum HOM05D004681 ORTHO05D005541 1.9e-104 383.3 323 60.4
BraA09t36865Z Brassica rapa HOM05D004681 ORTHO05D005541 2.5e-104 382.9 323 59.4
Carub.0003s3332 Capsella rubella HOM05D004681 ORTHO05D005541 3.3e-104 382.5 324 59.9
Peaxi162Scf00324g00718 Petunia axillaris HOM05D004681 ORTHO05D005541 3.3e-104 382.5 339 57.8
BolC9t54347H Brassica oleracea HOM05D004681 ORTHO05D005541 7.3e-104 381.3 324 59.3
Sc14g0001370 Simmondsia chinensis HOM05D004681 ORTHO05D005541 7.3e-104 381.3 327 57.8
CARHR109600 Cardamine hirsuta HOM05D004681 ORTHO05D005541 9.6e-104 380.9 324 59.6
Cc06_g22600 Coffea canephora HOM05D004681 ORTHO05D005541 9.6e-104 380.9 328 61.0
AT2G19080 Arabidopsis thaliana HOM05D004681 ORTHO05D005541 1.6e-103 380.2 324 61.7
Nitab4.5_0010281g0010 Nicotiana tabacum HOM05D004681 ORTHO05D005541 4.7e-103 378.6 321 59.5
MELO3C017439.2 Cucumis melo HOM05D004681 ORTHO05D005541 6.2e-103 378.3 322 60.6
CAN.G1668.9 Capsicum annuum HOM05D004681 ORTHO05D005541 1.4e-102 377.1 338 57.1
Aa31LG8G16140 Aethionema arabicum HOM05D004681 ORTHO05D005541 2.4e-102 376.3 323 60.1
C09p14440 Brassica napus HOM05D004681 ORTHO05D005541 3.1e-102 375.9 323 58.5
Aqoxy7G02735 Aquilegia oxysepala HOM05D004681 ORTHO05D005541 5.2e-102 375.2 332 58.1
HanXRQChr09g0266261 Helianthus annuus HOM05D004681 ORTHO05D005541 6.8e-102 374.8 330 58.8
BcaC06g36518 Brassica carinata HOM05D004681 ORTHO05D005541 2.0e-101 373.2 323 61.3
Oeu000976.1 Olea europaea HOM05D004681 ORTHO05D005541 2.0e-101 373.2 323 59.8
FAN22G1928 Fragaria x ananassa HOM05D004681 ORTHO05D005541 3.4e-101 372.5 322 57.5
FvH4_4g07590 Fragaria vesca HOM05D004681 ORTHO05D005541 8.4e-100 367.9 322 57.1
FAN12G2798 Fragaria x ananassa HOM05D004681 ORTHO05D005541 2.4e-99 366.3 322 56.8
Ah.09g230170 Amaranthus hybridus HOM05D004681 ORTHO05D005541 4.2e-99 365.5 329 59.3
Rhsim13G0200500 Rhododendron simsii HOM05D004681 ORTHO05D005541 4.2e-99 365.5 373 52.8
CsaV3_1G031790 Cucumis sativus L. HOM05D004681 ORTHO05D005541 9.3e-99 364.4 322 59.0
CSS0025965 Camellia sinensis var. sinensis HOM05D004681 ORTHO05D005541 1.6e-98 363.6 314 64.6
Hund09046 Selenicereus undatus HOM05D004681 ORTHO05D005541 1.6e-98 363.6 331 56.5
RcHm_v2.0_Chr7g0191541 Rosa chinensis HOM05D004681 ORTHO05D005541 1.0e-97 360.9 320 57.2
FAN17G0253 Fragaria x ananassa HOM05D004681 ORTHO05D005541 3.9e-97 359.0 322 58.1
Lsat_1_v5_gn_4_183080 Lactuca sativa HOM05D004681 ORTHO05D005541 3.9e-97 359.0 330 57.3
EL10Ac8g18317 Beta vulgaris HOM05D004681 ORTHO05D005541 6.6e-97 358.2 333 55.6
AUR62033246 Chenopodium quinoa HOM05D004681 ORTHO05D005541 6.6e-97 358.2 328 55.8
Nitab4.5_0000074g0040 Nicotiana tabacum HOM05D004681 ORTHO05D005541 6.6e-97 358.2 293 62.1
PSO079G0045 Papaver somniferum HOM05D004681 ORTHO05D005541 7.3e-96 354.8 325 58.2
unitig_578.g16069 Utricularia gibba HOM05D004681 ORTHO05D005541 7.3e-96 354.8 317 56.2
ECA232G3088 Erigeron canadensis HOM05D004681 ORTHO05D005541 2.8e-95 352.8 324 59.0
Migut.L01897 Erythranthe guttata HOM05D004681 ORTHO05D005541 6.2e-95 351.7 323 59.1
C07p03410 Brassica napus HOM05D004681 ORTHO05D005541 1.4e-94 350.5 323 56.3
BolC7t40740H Brassica oleracea HOM05D004681 ORTHO05D005541 1.4e-94 350.5 323 56.3
PSO423G0181 Papaver somniferum HOM05D004681 ORTHO05D005541 3.1e-94 349.4 324 57.1
MBI13_g31546_MAGBIO Magnolia biondii HOM05D004681 ORTHO05D005541 5.3e-94 348.6 331 56.5
A07p01650 Brassica napus HOM05D004681 ORTHO05D005541 6.9e-94 348.2 245 67.8
BraA07t27967Z Brassica rapa HOM05D004681 ORTHO05D005541 6.9e-94 348.2 245 67.8
Glyma.15G164000 Glycine max HOM05D004681 ORTHO05D005541 2.0e-93 346.7 324 52.5
HanXRQChr10g0297571 Helianthus annuus HOM05D004681 ORTHO05D005541 4.5e-93 345.5 370 51.1
SGA_v2.0_scaffold21G09637 Striga asiatica HOM05D004681 ORTHO05D005541 4.5e-93 345.5 324 56.2
arahy.Tifrunner.gnm1.ann1.K04ERL Arachis hypogaea HOM05D004681 ORTHO05D005541 7.6e-93 344.7 326 59.2
CSS0001946 Camellia sinensis var. sinensis HOM05D004681 ORTHO05D005541 1.3e-92 344.0 232 69.8
COL.COLO4_29315 Corchorus olitorius HOM05D004681 ORTHO05D005541 1.3e-92 344.0 275 63.6
arahy.Tifrunner.gnm1.ann1.L4KBSE Arachis hypogaea HOM05D004681 ORTHO05D005541 2.2e-92 343.2 326 58.9
Glyma.09G057900 Glycine max HOM05D004681 ORTHO05D005541 3.2e-91 339.3 327 52.0
Lj7A127G13 Lonicera japonica HOM05D004681 ORTHO05D005541 9.3e-91 337.8 281 60.5
Sed0004411 Sechium edule HOM05D004681 ORTHO05D005541 1.3e-89 334.0 245 64.9
Glyma.13G099400 Glycine max HOM05D004681 ORTHO05D005541 1.1e-88 330.9 318 56.6
HPP92_004723 Vanilla planifolia HOM05D004681 ORTHO05D005541 5.6e-88 328.6 319 52.4
VMungo1215G0406 Vigna mungo HOM05D004681 ORTHO05D005541 1.8e-86 323.6 318 50.9
arahy.Tifrunner.gnm1.ann1.KM341F Arachis hypogaea HOM05D004681 ORTHO05D005541 9.0e-86 321.2 329 52.3
Glyma.17G060700 Glycine max HOM05D004681 ORTHO05D005541 2.0e-85 320.1 318 54.7
Lalb_Chr15g0084091 Lupinus albus HOM05D004681 ORTHO05D005541 9.9e-85 317.8 331 50.8
Phvul.003G142900 Phaseolus vulgaris HOM05D004681 ORTHO05D005541 1.3e-84 317.4 315 50.2
arahy.Tifrunner.gnm1.ann1.LX7F61 Arachis hypogaea HOM05D004681 ORTHO05D005541 1.4e-83 313.9 329 54.4
Medtr4g127630 Medicago truncatula HOM05D004681 ORTHO05D005541 9.3e-83 311.2 319 51.1
Ca_21245_v3 Cicer arietinum L. HOM05D004410 ORTHO05D006134 1.0e-81 307.8 318 53.8
Phvul.009G237800 Phaseolus vulgaris HOM05D004681 ORTHO05D005541 3.9e-81 305.8 328 54.0
Os06g0168000 Oryza sativa ssp. japonica HOM05D004681 ORTHO05D005541 1.5e-80 303.9 329 55.0
ATR0626G278 Amborella trichopoda HOM05D004681 ORTHO05D005541 1.9e-80 303.5 334 56.0
VMungo1309G2393 Vigna mungo HOM05D004681 ORTHO05D005541 4.3e-80 302.4 320 53.4
Medtr2g036910 Medicago truncatula HOM05D004681 ORTHO05D005541 7.4e-80 301.6 327 52.3
Psat0s736g0040 Pisum sativum HOM05D004681 ORTHO05D005541 9.6e-80 301.2 319 49.2
Lj6g0005497 Lotus japonicus HOM05D004681 ORTHO05D005541 1.3e-79 300.8 318 51.9
TPR.G5388 Trifolium pratense HOM05D004681 ORTHO05D005541 2.8e-79 299.7 318 52.5
Lj4g0016729 Lotus japonicus HOM05D004681 ORTHO05D005541 3.1e-78 296.2 318 52.5
Lalb_Chr12g0199511 Lupinus albus HOM05D004681 ORTHO05D005541 9.0e-78 294.7 313 55.0
Ca_02042_v3 Cicer arietinum L. HOM05D004681 ORTHO05D005541 1.0e-76 291.2 329 51.7
Nn2g12745 Nelumbo nucifera HOM05D004681 ORTHO05D005541 1.3e-76 290.8 323 51.1
Potri.018G147625 Populus trichocarpa HOM05D004681 ORTHO05D005541 1.1e-75 287.7 333 51.4
AUR62021331 Chenopodium quinoa HOM05D004681 ORTHO05D005541 7.9e-74 281.6 328 47.3
SHI02877 Sapria himalayana HOM05D004681 ORTHO05D005541 7.9e-74 281.6 478 36.8
TPR.G9028 Trifolium pratense HOM05D004681 ORTHO05D005541 2.3e-73 280.0 329 51.7
DCAR_019823 Daucus carota HOM05D004410 ORTHO05D006134 9.0e-70 268.1 334 46.7
HanXRQChr04g0105751 Helianthus annuus HOM05D004681 ORTHO05D005541 1.9e-67 260.4 193 65.3
TAR636G1425 Trochodendron aralioides HOM05D004681 ORTHO05D005541 3.7e-63 246.1 223 60.1
Psat1g145840 Pisum sativum HOM05D004681 ORTHO05D005541 4.5e-61 239.2 215 54.4
vmacro23062 Vaccinium macrocarpon HOM05D004681 ORTHO05D005541 4.5e-61 239.2 280 49.3
CDE06G1906 Ceratophyllum demersum HOM05D004681 ORTHO05D005541 1.4e-57 227.6 323 41.2
Haze_21984 Corylus avellana HOM05D004681 ORTHO05D005541 6.7e-57 225.3 210 55.2
Pp3c12_12510 Physcomitrium patens HOM05D004681 ORTHO05D005541 1.5e-53 214.2 311 38.3
Pp3c4_10660 Physcomitrium patens HOM05D004681 ORTHO05D005541 2.0e-53 213.8 324 36.1
Mapoly0001s0301 Marchantia polymorpha HOM05D004681 ORTHO05D005541 1.7e-52 210.7 318 43.7
RcHm_v2.0_Chr7g0191431 Rosa chinensis HOM05D004681 ORTHO05D005541 6.5e-52 208.8 298 44.3
Zm00001eb375500 Zea mays HOM05D004681 ORTHO05D005541 7.4e-48 195.3 182 53.3
CAN.G609.4 Capsicum annuum HOM05D004681 ORTHO05D005541 2.2e-47 193.7 141 63.8
SGA_v2.0_scaffold41G15854 Striga asiatica HOM05D004681 ORTHO05D005541 1.6e-45 187.6 262 46.6
AagrBONN_evm.TU.Sc2ySwM_228.4196 Anthoceros agrestis HOM05D004681 ORTHO05D005541 1.0e-41 174.9 308 32.1
SMO358G0154 Selaginella moellendorffii HOM05D004681 ORTHO05D005541 1.0e-41 174.9 327 37.9
Potri.001G065336 Populus trichocarpa HOM05D004681 ORTHO05D005541 3.1e-38 163.3 113 73.5
Ca_02046_v3 Cicer arietinum L. HOM05D004681 ORTHO05D005541 2.7e-34 150.2 227 47.1
Potri.018G145080 Populus trichocarpa HOM05D004681 ORTHO05D005541 1.7e-31 141.0 171 59.1
CAN.G497.61 Capsicum annuum HOM05D004681 ORTHO05D005541 2.0e-29 134.0 118 55.9
Potri.001G064609 Populus trichocarpa HOM05D004681 ORTHO05D005541 1.4e-25 121.3 79 74.7
CAN.G266.1 Capsicum annuum HOM05D004681 ORTHO05D005541 1.1e-22 111.7 157 40.1
Haze_21988 Corylus avellana HOM05D004681 ORTHO05D005541 4.1e-22 109.8 121 51.2
SMO367G0296 Selaginella moellendorffii HOM05D004681 ORTHO05D005541 1.0e-20 105.1 247 32.4
Potri.001G065000 Populus trichocarpa HOM05D004681 ORTHO05D005541 1.5e-19 101.3 119 52.9
CBR_g39348 Chara braunii HOM05D000019 ORTHO05D000002 4.7e-18 96.3 188 33.0
Haze_21985 Corylus avellana HOM05D004681 ORTHO05D005541 4.0e-17 93.2 115 56.5
HanXRQChr04g0105741 Helianthus annuus HOM05D004681 ORTHO05D005541 4.4e-16 89.7 117 47.0
QL05p087685 Quercus lobata HOM05D004681 ORTHO05D005541 1.1e-14 85.1 206 31.1
SMO230G0066 Selaginella moellendorffii HOM05D004681 ORTHO05D005541 1.5e-11 74.7 234 28.6
vmacro04071 Vaccinium macrocarpon HOM05D004681 ORTHO05D005541 9.5e-11 72.0 111 41.4
SMO367G1182 Selaginella moellendorffii HOM05D004681 ORTHO05D005541 5.2e-09 66.2 180 28.9
Cre03.g177900 Chlamydomonas reinhardtii HOM05D004681 ORTHO05D005541 2.9e-07 60.5 312 25.6
MELO3C029108.2 Cucumis melo HOM05D004681 ORTHO05D005541 4.9e-07 59.7 48 54.2
AUR62034598 Chenopodium quinoa HOM05D022644 ORTHO05D003557 1.4e-06 58.2 52 53.8


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