Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.14G159400 Manihot esculenta HOM05D006498 ORTHO05D006377 1.2e-169 600.1 403 100.0
Duzib150G1211 Durio zibethinus HOM05D006498 ORTHO05D006377 1.4e-72 277.7 444 53.2
TWI34G1139 Tripterygium wilfordii HOM05D006498 ORTHO05D006377 5.5e-69 265.8 415 48.9
VMungo1215G1417 Vigna mungo HOM05D006498 ORTHO05D006377 2.2e-65 253.8 416 48.8
Haze_22031 Corylus avellana HOM05D006498 ORTHO05D006377 2.8e-65 253.4 413 51.3
Gohir.D13G212600 Gossypium hirsutum HOM05D006498 ORTHO05D006377 3.7e-65 253.1 444 55.2
Gorai.013G243000 Gossypium raimondii HOM05D006498 ORTHO05D006377 3.7e-65 253.1 444 55.2
CSS0012471 Camellia sinensis var. sinensis HOM05D006498 ORTHO05D006377 4.8e-65 252.7 442 47.5
Potri.006G075000 Populus trichocarpa HOM05D006498 ORTHO05D006377 8.2e-65 251.9 413 58.1
Phvul.003G140900 Phaseolus vulgaris HOM05D006498 ORTHO05D006377 5.3e-64 249.2 408 49.3
Ca_21256_v3 Cicer arietinum L. HOM05D006498 ORTHO05D006377 3.8e-62 243.0 413 49.6
TWI32G0168 Tripterygium wilfordii HOM05D006498 ORTHO05D006377 8.5e-62 241.9 403 44.7
Thecc.09G186800 Theobroma cacao HOM05D006498 ORTHO05D006377 1.1e-61 241.5 426 53.5
Gohir.A13G208200 Gossypium hirsutum HOM05D006498 ORTHO05D006377 1.2e-60 238.0 353 59.5
CiPaw.07G197600 Carya illinoinensis HOM05D006498 ORTHO05D006377 1.0e-59 235.0 412 46.1
arahy.Tifrunner.gnm1.ann1.YNM2K2 Arachis hypogaea HOM05D006498 ORTHO05D006377 1.8e-59 234.2 436 50.7
arahy.Tifrunner.gnm1.ann1.XIUU7W Arachis hypogaea HOM05D006498 ORTHO05D006377 2.3e-59 233.8 434 50.9
Cfa013457 Carpinus fangiana HOM05D006498 ORTHO05D006377 4.0e-59 233.0 415 51.8
Ciclev10008415m.g Citrus clementina HOM05D006498 ORTHO05D006377 4.0e-59 233.0 429 50.1
Actinidia23350 Actinidia chinensis HOM05D006498 ORTHO05D006377 6.7e-59 232.3 445 43.8
FAN12G3360 Fragaria x ananassa HOM05D006498 ORTHO05D006377 8.8e-59 231.9 308 54.5
Prupe.1G074500 Prunus persica HOM05D006498 ORTHO05D006377 1.5e-58 231.1 439 45.8
Glyma.13G101000 Glycine max HOM05D006498 ORTHO05D006377 2.6e-58 230.3 294 55.8
MD13G1239600 Malus domestica HOM05D006498 ORTHO05D006377 4.4e-58 229.6 442 47.7
FAN17G1293 Fragaria x ananassa HOM05D006498 ORTHO05D006377 1.3e-57 228.0 406 49.0
Dinv28799 Davidia involucrata HOM05D006498 ORTHO05D006377 1.7e-57 227.6 257 56.4
CAN.G844.1 Capsicum annuum HOM05D006498 ORTHO05D006377 2.2e-57 227.3 414 45.2
Glyma.17G058700 Glycine max HOM05D006498 ORTHO05D006377 2.2e-57 227.3 416 55.8
Medtr4g127350 Medicago truncatula HOM05D006498 ORTHO05D006377 2.2e-57 227.3 421 51.3
Sabra06G0055700 Salix brachista HOM05D006498 ORTHO05D006377 2.8e-57 226.9 488 45.9
FvH4_4g07150 Fragaria vesca HOM05D006498 ORTHO05D006377 8.2e-57 225.3 415 47.5
GSVIVG01029313001 Vitis vinifera HOM05D006498 ORTHO05D006377 1.1e-56 224.9 347 53.9
Oeu003665.1 Olea europaea HOM05D006498 ORTHO05D006377 1.6e-55 221.1 459 54.0
Eucgr.C00107 Eucalyptus grandis HOM05D006498 ORTHO05D006377 2.2e-54 217.2 305 58.0
Hma1.2p1_0491F.1_g164630 Hydrangea macrophylla HOM05D006498 ORTHO05D006377 2.2e-54 217.2 430 46.3
MELO3C017425.2 Cucumis melo HOM05D006498 ORTHO05D006377 1.1e-53 214.9 434 44.9
Lsat_1_v5_gn_9_16541 Lactuca sativa HOM05D006498 ORTHO05D006377 1.1e-53 214.9 464 41.8
Atru.chr7.955 Acer truncatum HOM05D006498 ORTHO05D006377 1.9e-53 214.2 425 47.5
Nitab4.5_0000038g0230 Nicotiana tabacum HOM05D006498 ORTHO05D006377 7.2e-53 212.2 442 45.9
Peaxi162Scf00235g00219 Petunia axillaris HOM05D006498 ORTHO05D006377 7.2e-53 212.2 346 46.0
Lj2A1114T36 Lonicera japonica HOM05D006498 ORTHO05D006377 9.4e-53 211.8 487 48.0
Aqoxy7G02850 Aquilegia oxysepala HOM05D006498 ORTHO05D006377 3.6e-52 209.9 437 42.6
CsaV3_1G031910 Cucumis sativus L. HOM05D006498 ORTHO05D006377 3.6e-52 209.9 407 50.9
SGA_v2.0_scaffold95G28702 Striga asiatica HOM05D006498 ORTHO05D006377 3.6e-52 209.9 478 38.9
Sopen09g019810 Solanum pennellii HOM05D006498 ORTHO05D006377 4.7e-52 209.5 303 49.2
RcHm_v2.0_Chr4g0399301 Rosa chinensis HOM05D006498 ORTHO05D006377 6.1e-52 209.1 441 45.1
Nn4g25125 Nelumbo nucifera HOM05D006498 ORTHO05D006377 1.0e-51 208.4 476 41.6
Cc01_g15950 Coffea canephora HOM05D006498 ORTHO05D006377 1.4e-51 208.0 449 44.5
SalBow3G4321 Salvia bowleyana HOM05D006498 ORTHO05D006377 3.0e-51 206.8 323 47.1
Lj4g0022386 Lotus japonicus HOM05D006498 ORTHO05D006377 6.8e-51 205.7 330 47.6
Psat0s3389g0200 Pisum sativum HOM05D006498 ORTHO05D006377 6.8e-51 205.7 297 56.6
Sc18g0007220 Simmondsia chinensis HOM05D006498 ORTHO05D006377 1.2e-50 204.9 343 46.6
ClCG06G013640 Citrullus lanatus HOM05D006498 ORTHO05D006377 2.0e-50 204.1 495 45.7
FAN22G0654 Fragaria x ananassa HOM05D006498 ORTHO05D006377 2.6e-50 203.8 468 44.2
CANSAT11G0487 Cannabis sativa HOM05D006498 ORTHO05D006377 3.4e-50 203.4 310 55.2
Nitab4.5_0005686g0030 Nicotiana tabacum HOM05D006498 ORTHO05D006377 5.7e-50 202.6 436 45.0
Sed0023189 Sechium edule HOM05D006498 ORTHO05D006377 1.7e-49 201.1 412 45.6
HanXRQChr07g0190541 Helianthus annuus HOM05D006498 ORTHO05D006377 1.4e-48 198.0 341 45.5
Migut.N00676 Erythranthe guttata HOM05D006498 ORTHO05D006377 4.1e-48 196.4 424 43.6
PGR142G3062 Punica granatum HOM05D006498 ORTHO05D006377 1.2e-47 194.9 451 39.0
PGR142G3622 Punica granatum HOM05D006498 ORTHO05D006377 1.2e-47 194.9 451 39.0
Aa31LG8G16310 Aethionema arabicum HOM05D006498 ORTHO05D006377 3.5e-47 193.4 335 44.8
THA.LOC104820009 Tarenaya hassleriana HOM05D006498 ORTHO05D006377 4.5e-47 193.0 432 44.7
CARHR109730 Cardamine hirsuta HOM05D006498 ORTHO05D006377 5.9e-47 192.6 345 44.9
MBI16_g05840_MAGBIO Magnolia biondii HOM05D006498 ORTHO05D006377 1.3e-46 191.4 370 50.8
Thhalv10022749m.g Eutrema salsugineum HOM05D006498 ORTHO05D006377 1.7e-46 191.0 416 42.1
BolC7t40702H Brassica oleracea HOM05D006498 ORTHO05D006377 3.8e-46 189.9 417 42.0
DCAR_004773 Daucus carota HOM05D006498 ORTHO05D006377 8.6e-46 188.7 309 57.3
C07p03100 Brassica napus HOM05D006498 ORTHO05D006377 1.5e-45 188.0 417 42.0
Rhsim13G0054400 Rhododendron simsii HOM05D006498 ORTHO05D006377 1.5e-45 188.0 340 42.4
AT2G19270 Arabidopsis thaliana HOM05D006498 ORTHO05D006377 1.9e-45 187.6 419 40.3
unitig_60.g25575 Utricularia gibba HOM05D006498 ORTHO05D006377 4.2e-45 186.4 449 37.4
MSTRG.17962 Avicennia marina HOM05D006498 ORTHO05D006377 5.5e-45 186.0 502 37.8
BcaC06g36544 Brassica carinata HOM05D006498 ORTHO05D006377 9.5e-45 185.3 417 41.5
AL3G49020 Arabidopsis lyrata HOM05D006498 ORTHO05D006377 2.1e-44 184.1 423 40.9
Hma1.2p1_0491F.1_g164640 Hydrangea macrophylla HOM05D006498 ORTHO05D006377 2.8e-44 183.7 112 77.7
BcaB03g16716 Brassica carinata HOM05D006498 ORTHO05D006377 3.4e-42 176.8 314 45.9
Sp3g32630 Schrenkiella parvula HOM05D006498 ORTHO05D006377 3.4e-42 176.8 428 38.8
BraA07t27953Z Brassica rapa HOM05D006498 ORTHO05D006377 2.2e-41 174.1 420 42.9
A07p01520 Brassica napus HOM05D006498 ORTHO05D006377 6.3e-41 172.6 422 42.9
EL10Ac8g19141 Beta vulgaris HOM05D006498 ORTHO05D006377 8.3e-41 172.2 122 71.3
AUR62025173 Chenopodium quinoa HOM05D006498 ORTHO05D006377 1.1e-40 171.8 243 46.5
vmacro02834 Vaccinium macrocarpon HOM05D006498 ORTHO05D006377 1.8e-40 171.0 417 37.4
ECA247G1929 Erigeron canadensis HOM05D000109 ORTHO05D006377 2.4e-40 170.6 410 44.9
Lalb_Chr12g0199631 Lupinus albus HOM05D006498 ORTHO05D006377 7.0e-40 169.1 107 76.6
Lsat_1_v5_gn_3_41001 Lactuca sativa HOM05D006498 ORTHO05D006377 2.0e-39 167.5 103 81.6
PSO063G6554 Papaver somniferum HOM05D006498 ORTHO05D006377 2.7e-39 167.2 331 43.5
PSO170G2385 Papaver somniferum HOM05D006498 ORTHO05D006377 2.7e-39 167.2 341 44.0
Carub.0003s3350 Capsella rubella HOM05D006498 ORTHO05D006377 4.5e-39 166.4 423 40.9
Os02g0175900 Oryza sativa ssp. japonica HOM05D006498 ORTHO05D006377 6.6e-38 162.5 99 81.8
CDE05G1404 Ceratophyllum demersum HOM05D006498 ORTHO05D006377 1.1e-37 161.8 343 41.1
Cpa.g.sc2680.1 Carica papaya HOM05D006498 ORTHO05D006377 3.3e-37 160.2 360 43.6
Lsat_1_v5_gn_7_52821 Lactuca sativa HOM05D006498 ORTHO05D006377 4.3e-37 159.8 103 78.6
HPP92_011644 Vanilla planifolia HOM05D006498 ORTHO05D006377 7.3e-37 159.1 435 37.0
Lsat_1_v5_gn_4_158461 Lactuca sativa HOM05D006498 ORTHO05D006377 1.2e-36 158.3 111 73.9
Lsat_1_v5_gn_5_22180 Lactuca sativa HOM05D006498 ORTHO05D006377 1.6e-36 157.9 101 79.2
Zm00001eb206900 Zea mays HOM05D006498 ORTHO05D006377 2.1e-36 157.5 99 79.8
Actinidia30000 Actinidia chinensis HOM05D006498 ORTHO05D006377 3.6e-36 156.8 263 46.4
Zm00001eb233520 Zea mays HOM05D006498 ORTHO05D006377 1.0e-35 155.2 97 79.4
Lsat_1_v5_gn_9_15580 Lactuca sativa HOM05D006498 ORTHO05D006377 6.8e-35 152.5 95 81.1
ATR0626G368 Amborella trichopoda HOM05D006498 ORTHO05D006377 2.6e-34 150.6 480 34.8
Mapoly0001s0081 Marchantia polymorpha HOM05D006498 ORTHO05D006377 1.0e-30 138.7 113 60.2
AagrBONN_evm.TU.Sc2ySwM_228.1455 Anthoceros agrestis HOM05D006498 ORTHO05D006377 8.6e-30 135.6 100 71.0
CDE05G1079 Ceratophyllum demersum HOM05D006498 ORTHO05D006377 8.0e-28 129.0 75 86.7
SMO361G0453 Selaginella moellendorffii HOM05D006498 ORTHO05D006377 3.1e-27 127.1 108 58.3
Lalb_Chr13g0299941 Lupinus albus HOM05D006498 ORTHO05D006377 8.9e-27 125.6 286 36.7
Pp3c15_6280 Physcomitrium patens HOM05D006498 ORTHO05D006377 7.5e-26 122.5 107 60.7
COL.COLO4_06397 Corchorus olitorius HOM05D006498 ORTHO05D006377 1.1e-24 118.6 63 90.5
Solyc09g055870.2 Solanum lycopersicum HOM05D006498 ORTHO05D006377 1.1e-24 118.6 323 37.8
CBR_g12030 Chara braunii HOM05D006498 ORTHO05D006377 6.0e-23 112.8 94 60.6
Lsat_1_v5_gn_4_108221 Lactuca sativa HOM05D006498 ORTHO05D006377 7.3e-21 105.9 66 80.3
Ah.09g231280 Amaranthus hybridus HOM05D006498 ORTHO05D006377 6.2e-20 102.8 323 37.5
QL02p046691 Quercus lobata HOM05D006498 ORTHO05D000004 1.4e-19 101.7 241 40.2
QL02p046697 Quercus lobata HOM05D006498 ORTHO05D006377 6.8e-19 99.4 54 83.3
Lalb_Chr13g0299961 Lupinus albus HOM05D006498 ORTHO05D006377 3.7e-17 93.6 54 83.3
SHI03076 Sapria himalayana HOM05D006498 ORTHO05D006377 3.2e-16 90.5 54 79.6
Solyc09g055850.3 Solanum lycopersicum HOM05D006498 ORTHO05D006377 9.2e-16 89.0 53 81.1
SGA_v2.0_scaffold95G28701 Striga asiatica HOM05D006498 ORTHO05D006377 2.7e-15 87.4 58 69.0
Sed0023288 Sechium edule HOM05D006498 ORTHO05D006377 2.6e-10 70.9 400 31.8
Cre06.g278258 Chlamydomonas reinhardtii HOM05D006498 ORTHO05D006377 3.5e-07 60.5 100 38.0
PRCOL_00004634 Prasinoderma coloniale HOM05D006498 ORTHO05D006377 3.5e-07 60.5 111 33.3
MCO07G543 Micromonas commoda HOM05D006498 ORTHO05D006377 6.6e-06 56.2 67 44.8


User provided reference genes

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