Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.14G157565 Manihot esculenta HOM05D007139 ORTHO05D009171 3.6e-76 288.5 183 100.0
Potri.006G165800 Populus trichocarpa HOM05D007139 ORTHO05D009171 5.1e-54 214.9 186 70.4
Sabra06G0127600 Salix brachista HOM05D007139 ORTHO05D009171 6.4e-49 198.0 196 62.2
Thecc.09G178100 Theobroma cacao HOM05D007139 ORTHO05D009171 2.7e-47 192.6 183 77.6
FAN12G3123 Fragaria x ananassa HOM05D007139 ORTHO05D009171 6.6e-46 188.0 187 62.0
FvH4_4g07780 Fragaria vesca HOM05D007139 ORTHO05D009171 1.9e-45 186.4 187 61.5
Duzib168G1431 Durio zibethinus HOM05D007139 ORTHO05D009171 2.1e-44 183.0 185 75.1
COL.COLO4_06001 Corchorus olitorius HOM05D007139 ORTHO05D009171 8.1e-44 181.0 186 74.7
Ciclev10009657m.g Citrus clementina HOM05D007139 ORTHO05D009171 4.0e-43 178.7 185 71.4
Nn8g40530 Nelumbo nucifera HOM05D007139 ORTHO05D009171 3.4e-42 175.6 184 60.9
FAN22G0146 Fragaria x ananassa HOM05D007139 ORTHO05D009171 5.8e-42 174.9 187 59.4
RcHm_v2.0_Chr4g0400871 Rosa chinensis HOM05D007139 ORTHO05D009171 6.4e-41 171.4 192 58.3
AUR62033234 Chenopodium quinoa HOM05D007139 ORTHO05D009171 1.1e-40 170.6 188 53.7
CANSAT11G2567 Cannabis sativa HOM05D007139 ORTHO05D009171 4.2e-40 168.7 185 68.1
CiPaw.07G194300 Carya illinoinensis HOM05D007139 ORTHO05D009171 6.0e-39 164.9 184 57.1
AUR62021317 Chenopodium quinoa HOM05D007139 ORTHO05D009171 6.0e-39 164.9 188 51.6
CAN.G32.11 Capsicum annuum HOM05D007139 ORTHO05D009171 5.1e-38 161.8 188 54.8
Peaxi162Scf01054g00025 Petunia axillaris HOM05D007139 ORTHO05D009171 6.2e-36 154.8 192 57.8
Nitab4.5_0000055g0210 Nicotiana tabacum HOM05D007139 ORTHO05D009171 1.1e-35 154.1 187 54.0
TWI63G0338 Tripterygium wilfordii HOM05D007139 ORTHO05D009171 2.4e-35 152.9 183 55.7
Psat0s3717g0080 Pisum sativum HOM05D007139 ORTHO05D009171 5.8e-34 148.3 188 48.9
MELO3C004003.2 Cucumis melo HOM05D007139 ORTHO05D009171 7.6e-34 147.9 190 49.5
Ah.09g230020 Amaranthus hybridus HOM05D000263 ORTHO05D000213 9.9e-34 147.5 187 48.7
MSTRG.6235 Avicennia marina HOM05D007139 ORTHO05D009171 1.7e-33 146.7 151 62.9
Cc06_g13070 Coffea canephora HOM05D007139 ORTHO05D009171 2.2e-33 146.4 187 51.9
Nitab4.5_0013636g0010 Nicotiana tabacum HOM05D007139 ORTHO05D009171 3.8e-33 145.6 187 51.9
CDE07G0879 Ceratophyllum demersum HOM05D007139 ORTHO05D009171 1.1e-32 144.1 193 49.2
THA.LOC104813514 Tarenaya hassleriana HOM05D007139 ORTHO05D009171 1.1e-32 144.1 183 49.2
Ah.14g083710 Amaranthus hybridus HOM05D007139 ORTHO05D009171 3.2e-32 142.5 187 52.9
ATR0580G128 Amborella trichopoda HOM05D007139 ORTHO05D009171 3.2e-32 142.5 185 50.3
FAN07G2196 Fragaria x ananassa HOM05D007139 ORTHO05D009171 5.4e-32 141.7 187 52.4
FAN17G0841 Fragaria x ananassa HOM05D007139 ORTHO05D009171 1.0e-30 137.5 187 52.9
CiPaw.08G034800 Carya illinoinensis HOM05D007139 ORTHO05D009171 1.3e-30 137.1 184 52.7
GSVIVG01029235001 Vitis vinifera HOM05D007139 ORTHO05D009171 5.1e-30 135.2 184 49.5
Glyma.13G098100 Glycine max HOM05D007139 ORTHO05D009171 8.7e-30 134.4 186 51.1
Gohir.A08G019100 Gossypium hirsutum HOM05D007139 ORTHO05D009171 5.6e-29 131.7 185 51.9
Actinidia02506 Actinidia chinensis HOM05D007139 ORTHO05D009171 1.6e-28 130.2 181 49.7
arahy.Tifrunner.gnm1.ann1.832R2S Arachis hypogaea HOM05D007139 ORTHO05D009171 3.7e-28 129.0 178 61.8
Cpa.g.c34934.2 Carica papaya HOM05D007139 ORTHO05D009171 6.2e-28 128.3 186 50.5
Duzib150G0167 Durio zibethinus HOM05D007139 ORTHO05D009171 1.1e-27 127.5 185 63.2
ClCG11G011980 Citrullus lanatus HOM05D007139 ORTHO05D009171 1.4e-27 127.1 190 47.4
HPP92_017140 Vanilla planifolia HOM05D007139 ORTHO05D009171 4.0e-27 125.6 129 53.5
Gohir.D08G029700 Gossypium hirsutum HOM05D007139 ORTHO05D009171 6.9e-27 124.8 185 50.3
Gorai.004G027200 Gossypium raimondii HOM05D007139 ORTHO05D009171 6.9e-27 124.8 185 50.3
PSO170G0255 Papaver somniferum HOM05D007139 ORTHO05D009171 6.9e-27 124.8 193 50.3
EL10Ac8g18300 Beta vulgaris HOM05D007139 ORTHO05D009171 9.0e-27 124.4 186 45.2
Lju50A10T16 Lonicera japonica HOM05D007139 ORTHO05D009171 1.2e-26 124.0 123 60.2
Rhsim01G0002000 Rhododendron simsii HOM05D007139 ORTHO05D009171 1.2e-26 124.0 188 52.1
Atru.chr7.836 Acer truncatum HOM05D007139 ORTHO05D009171 1.5e-26 123.6 136 59.6
Migut.J01499 Erythranthe guttata HOM05D007139 ORTHO05D009171 1.5e-26 123.6 187 43.3
QL11p005114 Quercus lobata HOM05D007139 ORTHO05D009171 2.0e-26 123.2 187 50.8
PSO063G4029 Papaver somniferum HOM05D007139 ORTHO05D009171 4.5e-26 122.1 193 51.3
Hma1.2p1_1086F.1_g255460 Hydrangea macrophylla HOM05D007139 ORTHO05D009171 1.7e-25 120.2 186 50.0
Zm00001eb226320 Zea mays HOM05D007139 ORTHO05D009171 2.2e-25 119.8 159 51.6
Medtr4g127690 Medicago truncatula HOM05D007139 ORTHO05D009171 4.9e-25 118.6 188 46.3
vmacro13142 Vaccinium macrocarpon HOM05D007139 ORTHO05D009171 4.9e-25 118.6 192 54.7
MD13G1247100 Malus domestica HOM05D007139 ORTHO05D009171 8.4e-25 117.9 186 49.5
Hund09038 Selenicereus undatus HOM05D007139 ORTHO05D009171 1.1e-24 117.5 179 46.4
TAR383G0430 Trochodendron aralioides HOM05D007139 ORTHO05D009171 1.9e-24 116.7 186 50.5
arahy.Tifrunner.gnm1.ann1.N1BBZF Arachis hypogaea HOM05D007139 ORTHO05D009171 2.4e-24 116.3 165 64.2
Carub.0008s1786 Capsella rubella HOM05D007139 ORTHO05D009171 3.2e-24 115.9 187 44.4
A02p08570 Brassica napus HOM05D007139 ORTHO05D009171 5.5e-24 115.2 183 45.4
BraA02t05926Z Brassica rapa HOM05D007139 ORTHO05D009171 5.5e-24 115.2 183 45.4
Ca_21240_v3 Cicer arietinum L. HOM05D007139 ORTHO05D009171 7.1e-24 114.8 157 49.7
Lalb_Chr12g0199481 Lupinus albus HOM05D007139 ORTHO05D009171 7.1e-24 114.8 185 44.9
VMungo1215G0446 Vigna mungo HOM05D007139 ORTHO05D009171 6.0e-23 111.7 153 51.6
Phvul.003G143600 Phaseolus vulgaris HOM05D007139 ORTHO05D009171 7.9e-23 111.3 185 44.3
Dinv19561 Davidia involucrata HOM05D007139 ORTHO05D009171 1.8e-22 110.2 184 47.3
SEGI_32174 Sequoiadendron giganteum HOM05D007139 ORTHO05D009171 2.3e-22 109.8 168 44.6
Glyma.17G061600 Glycine max HOM05D007139 ORTHO05D009171 1.5e-21 107.1 181 44.2
Oeu025690.1 Olea europaea HOM05D007139 ORTHO05D009171 1.9e-21 106.7 182 46.7
Hund09039 Selenicereus undatus HOM05D007139 ORTHO05D009171 2.5e-21 106.3 184 46.2
Lj4g0008370 Lotus japonicus HOM05D007139 ORTHO05D009171 3.3e-21 105.9 173 48.6
Cfa013405 Carpinus fangiana HOM05D007139 ORTHO05D009171 9.6e-21 104.4 188 47.9
TPR.G5382 Trifolium pratense HOM05D007139 ORTHO05D009171 9.6e-21 104.4 126 54.8
PGR044G0070 Punica granatum HOM05D007139 ORTHO05D009171 1.3e-20 104.0 187 47.1
Gohir.D05G004250 Gossypium hirsutum HOM05D007139 ORTHO05D009171 2.8e-20 102.8 174 42.0
Aqoxy7G02982 Aquilegia oxysepala HOM05D007139 ORTHO05D009171 3.7e-20 102.4 187 44.4
Haze_21948 Corylus avellana HOM05D007139 ORTHO05D009171 3.7e-20 102.4 95 68.4
ECA234G0508 Erigeron canadensis HOM05D007139 ORTHO05D009171 3.7e-20 102.4 191 44.5
Gorai.009G004000 Gossypium raimondii HOM05D007139 ORTHO05D009171 1.1e-19 100.9 162 42.6
SGA_v2.0_scaffold66G22428 Striga asiatica HOM05D007139 ORTHO05D009171 2.4e-19 99.8 186 40.3
Eucgr.C02387 Eucalyptus grandis HOM05D007139 ORTHO05D009171 9.0e-19 97.8 137 50.4
Sopen07g006630 Solanum pennellii HOM05D007139 ORTHO05D009171 1.5e-18 97.1 189 43.4
Thhalv10014766m.g Eutrema salsugineum HOM05D007139 ORTHO05D009171 2.6e-18 96.3 165 40.0
MBI14_g08139_MAGBIO Magnolia biondii HOM05D007139 ORTHO05D009171 3.4e-18 95.9 184 41.3
Sc18g0007530 Simmondsia chinensis HOM05D007139 ORTHO05D009171 7.6e-18 94.7 158 50.6
Sed0022431 Sechium edule HOM05D007139 ORTHO05D009171 3.8e-17 92.4 182 41.8
Lsat_1_v5_gn_5_85520 Lactuca sativa HOM05D007139 ORTHO05D009171 1.4e-16 90.5 193 44.6
A10p14810 Brassica napus HOM05D007139 ORTHO05D009171 1.9e-16 90.1 124 50.8
AT5G57345 Arabidopsis thaliana HOM05D007139 ORTHO05D009171 9.3e-16 87.8 186 39.2
CARHR271140 Cardamine hirsuta HOM05D007139 ORTHO05D009171 9.3e-16 87.8 186 39.2
Aa31LG3G13220 Aethionema arabicum HOM05D007139 ORTHO05D009171 1.2e-15 87.4 125 48.0
AL8G33320 Arabidopsis lyrata HOM05D007139 ORTHO05D009171 2.1e-15 86.7 186 38.7
HanXRQChr12g0384691 Helianthus annuus HOM05D007139 ORTHO05D009171 2.7e-15 86.3 189 38.6
BcaB05g22339 Brassica carinata HOM05D007139 ORTHO05D009171 6.0e-15 85.1 145 43.4
Gohir.A05G003850 Gossypium hirsutum HOM05D007139 ORTHO05D009171 3.0e-14 82.8 91 58.2
CsaV3_2G008540 Cucumis sativus L. HOM05D007139 ORTHO05D009171 1.1e-13 80.9 135 44.4
Os06g0694800 Oryza sativa ssp. japonica HOM05D007139 ORTHO05D009171 5.7e-13 78.6 165 38.8
DCAR_020130 Daucus carota HOM05D007139 ORTHO05D009171 1.1e-11 74.3 134 42.5
BcaC03g14161 Brassica carinata HOM05D007139 ORTHO05D009171 7.7e-10 68.2 183 36.1
CBR_g22376 Chara braunii HOM05D007139 ORTHO05D009171 2.1e-07 60.1 155 43.9
Lsat_1_v5_gn_1_19521 Lactuca sativa HOM05D007139 ORTHO05D009171 2.3e-06 56.6 125 38.4


User provided reference genes

Program Settings