Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.14G151900 Manihot esculenta HOM05D013890 ORTHO05D016266 6.3e-87 323.9 148 100.0
Sabra06G0131100 Salix brachista HOM05D013890 ORTHO05D016266 2.2e-47 192.6 141 58.9
Potri.006G170200 Populus trichocarpa HOM05D013890 ORTHO05D016266 6.3e-47 191.0 140 57.9
Thecc.09G169700 Theobroma cacao HOM05D013890 ORTHO05D016266 1.1e-43 180.3 135 56.3
Gohir.A08G090700 Gossypium hirsutum HOM05D013890 ORTHO05D016266 7.8e-37 157.5 135 49.6
Gohir.D08G095100 Gossypium hirsutum HOM05D013890 ORTHO05D016266 7.8e-37 157.5 135 49.6
QL02p097446 Quercus lobata HOM05D013890 ORTHO05D016266 1.0e-28 130.6 134 46.3
Haze_23914 Corylus avellana HOM05D013890 ORTHO05D016266 2.5e-27 125.9 117 45.3
TAR465G0001 Trochodendron aralioides HOM05D013890 ORTHO05D016266 1.8e-25 119.8 142 40.1
Nn1g08743 Nelumbo nucifera HOM05D000256 ORTHO05D000119 5.8e-16 88.2 142 31.0
Nn1g08741 Nelumbo nucifera HOM05D000256 ORTHO05D000119 1.3e-15 87.0 142 31.0
Nn1g08742 Nelumbo nucifera HOM05D000256 ORTHO05D000119 1.3e-15 87.0 142 31.0
Nn1g08719 Nelumbo nucifera HOM05D000256 ORTHO05D000119 3.7e-15 85.5 142 29.6
Nn1g08718 Nelumbo nucifera HOM05D000256 ORTHO05D000119 4.1e-14 82.0 138 31.2
Nn1g08705 Nelumbo nucifera HOM05D000256 ORTHO05D000119 7.1e-14 81.3 150 32.0
Nn7g36264 Nelumbo nucifera HOM05D013890 ORTHO05D016266 4.6e-13 78.6 133 32.3
FAN19G2757 Fragaria x ananassa HOM05D000256 ORTHO05D000119 1.0e-12 77.4 133 31.6
Nn2g15260 Nelumbo nucifera HOM05D013890 ORTHO05D016266 1.3e-12 77.0 107 33.6
Aqoxy16s007 Aquilegia oxysepala HOM05D000256 ORTHO05D000119 7.3e-11 71.2 123 30.1
Lj4g0012468 Lotus japonicus HOM05D000256 ORTHO05D000119 2.8e-10 69.3 110 33.6
Prupe.4G273700 Prunus persica HOM05D015853 ORTHO05D000119 3.6e-10 68.9 127 29.9
PSO170G2087 Papaver somniferum HOM05D000256 ORTHO05D000119 4.7e-10 68.6 133 29.3
Nn1g03102 Nelumbo nucifera HOM05D000256 ORTHO05D000119 3.1e-09 65.9 113 31.9
CiPaw.04G108000 Carya illinoinensis HOM05D000256 ORTHO05D000119 4.0e-09 65.5 142 28.2
Ciclev10024159m.g Citrus clementina HOM05D000256 ORTHO05D000119 4.0e-09 65.5 138 32.6
Gohir.A08G193464 Gossypium hirsutum HOM05D000256 ORTHO05D000119 5.2e-09 65.1 120 31.7
Nn1g03103 Nelumbo nucifera HOM05D000256 ORTHO05D000119 5.2e-09 65.1 139 28.8
Actinidia25723 Actinidia chinensis HOM05D000256 ORTHO05D000119 6.8e-09 64.7 115 33.9
Ciclev10006763m.g Citrus clementina HOM05D000256 ORTHO05D000119 1.2e-08 63.9 116 32.8
Nn6g33519 Nelumbo nucifera HOM05D000256 ORTHO05D000119 1.2e-08 63.9 136 28.7
CsaV3_7G025590 Cucumis sativus L. HOM05D000256 ORTHO05D000119 2.0e-08 63.2 110 35.5
Lalb_Chr07g0181531 Lupinus albus HOM05D000256 ORTHO05D000119 2.0e-08 63.2 113 30.1
Phvul.008G063100 Phaseolus vulgaris HOM05D000256 ORTHO05D000119 2.0e-08 63.2 109 35.8
CSS0039783 Camellia sinensis var. sinensis HOM05D000256 ORTHO05D000119 3.4e-08 62.4 145 31.7
CAN.G742.38 Capsicum annuum HOM05D000256 ORTHO05D000119 3.4e-08 62.4 112 29.5
Gorai.004G224300 Gossypium raimondii HOM05D000256 ORTHO05D000119 3.4e-08 62.4 115 31.3
SalBow4G0962 Salvia bowleyana HOM05D000256 ORTHO05D000119 3.4e-08 62.4 120 35.0
AL7G38890 Arabidopsis lyrata HOM05D000256 ORTHO05D000119 4.4e-08 62.0 111 31.5
Gohir.A08G193432 Gossypium hirsutum HOM05D000256 ORTHO05D000119 4.4e-08 62.0 116 28.4
Gohir.A08G193448 Gossypium hirsutum HOM05D000256 ORTHO05D000119 4.4e-08 62.0 121 30.6
PSO541G3450 Papaver somniferum HOM05D000256 ORTHO05D000119 4.4e-08 62.0 128 29.7
Phvul.003G125200 Phaseolus vulgaris HOM05D000256 ORTHO05D000119 4.4e-08 62.0 113 33.6
PGR042G2813 Punica granatum HOM05D000256 ORTHO05D000119 4.4e-08 62.0 140 31.4
Oeu055432.1 Olea europaea HOM05D000256 ORTHO05D000119 5.8e-08 61.6 96 36.5
Cfa002530 Carpinus fangiana HOM05D000256 ORTHO05D000119 7.6e-08 61.2 121 30.6
Sed0025080 Sechium edule HOM05D000256 ORTHO05D000119 7.6e-08 61.2 118 33.1
TAR365G0918 Trochodendron aralioides HOM05D000256 ORTHO05D000119 7.6e-08 61.2 110 31.8
ATR0693G139 Amborella trichopoda HOM05D000256 ORTHO05D000119 9.9e-08 60.8 137 28.5
TAR365G0490 Trochodendron aralioides HOM05D000256 ORTHO05D000119 9.9e-08 60.8 129 27.9
Ciclev10022738m.g Citrus clementina HOM05D000256 ORTHO05D000119 1.3e-07 60.5 138 31.2
Thecc.01G232000 Theobroma cacao HOM05D000256 ORTHO05D000119 1.3e-07 60.5 117 30.8
SGA_v2.0_scaffold57G20171 Striga asiatica HOM05D000256 ORTHO05D000119 1.7e-07 60.1 148 30.4
CiPaw.13G128600 Carya illinoinensis HOM05D000256 ORTHO05D000119 2.2e-07 59.7 109 31.2
MELO3C028768.2 Cucumis melo HOM05D000256 ORTHO05D000119 2.2e-07 59.7 118 33.9
FvH4_2g19740 Fragaria vesca HOM05D000256 ORTHO05D000119 2.2e-07 59.7 108 31.5
Gohir.D08G211350 Gossypium hirsutum HOM05D000256 ORTHO05D000119 2.2e-07 59.7 115 30.4
MBI18_g28934_MAGBIO Magnolia biondii HOM05D000256 ORTHO05D000119 2.2e-07 59.7 134 28.4
PSO210G4725 Papaver somniferum HOM05D000256 ORTHO05D000119 2.2e-07 59.7 121 25.6
Potri.002G252500 Populus trichocarpa HOM05D000256 ORTHO05D000119 2.2e-07 59.7 128 29.7
Prupe.8G208600 Prunus persica HOM05D000256 ORTHO05D000119 2.2e-07 59.7 139 28.8
TAR365G0031 Trochodendron aralioides HOM05D000256 ORTHO05D000119 2.2e-07 59.7 130 26.2
COL.COLO4_10970 Corchorus olitorius HOM05D000256 ORTHO05D000119 2.9e-07 59.3 111 31.5
Phvul.008G064500 Phaseolus vulgaris HOM05D000256 ORTHO05D000119 2.9e-07 59.3 111 36.0
Sed0011653 Sechium edule HOM05D000256 ORTHO05D000119 2.9e-07 59.3 120 30.8
TAR365G0089 Trochodendron aralioides HOM05D000256 ORTHO05D000119 2.9e-07 59.3 132 27.3
Thhalv10026872m.g Eutrema salsugineum HOM05D000256 ORTHO05D000119 3.8e-07 58.9 114 28.9
Glyma.13G116500 Glycine max HOM05D000256 ORTHO05D000119 3.8e-07 58.9 135 30.4
MD13G1231600 Malus domestica HOM05D000256 ORTHO05D000119 3.8e-07 58.9 139 28.8
SalBow4G1538 Salvia bowleyana HOM05D000256 ORTHO05D000119 3.8e-07 58.9 120 34.2
SalBow4G3236 Salvia bowleyana HOM05D000256 ORTHO05D000119 3.8e-07 58.9 120 34.2
TAR365G0192 Trochodendron aralioides HOM05D000256 ORTHO05D000119 3.8e-07 58.9 132 27.3
unitig_899.g15048 Utricularia gibba HOM05D000256 ORTHO05D000119 3.8e-07 58.9 140 30.0
FvH4_2g19700 Fragaria vesca HOM05D000256 ORTHO05D000119 4.9e-07 58.5 134 27.6
Lalb_Chr15g0076131 Lupinus albus HOM05D000256 ORTHO05D000119 4.9e-07 58.5 133 25.6
TAR365G0403 Trochodendron aralioides HOM05D000256 ORTHO05D000119 4.9e-07 58.5 115 30.4
TAR365G0555 Trochodendron aralioides HOM05D000256 ORTHO05D000119 4.9e-07 58.5 115 30.4
TAR365G1110 Trochodendron aralioides HOM05D000256 ORTHO05D000119 4.9e-07 58.5 115 30.4
Duzib138G1902 Durio zibethinus HOM05D000256 ORTHO05D000119 6.4e-07 58.2 114 30.7
Gohir.A11G198542 Gossypium hirsutum HOM05D000256 ORTHO05D000119 6.4e-07 58.2 111 31.5
PSO675G0702 Papaver somniferum HOM05D000256 ORTHO05D000119 6.4e-07 58.2 114 30.7
BcaNung02888 Brassica carinata HOM05D000256 ORTHO05D000119 8.4e-07 57.8 113 31.0
C07p56620 Brassica napus HOM05D000256 ORTHO05D000119 8.4e-07 57.8 113 31.0
BolC7t46141H Brassica oleracea HOM05D000256 ORTHO05D000119 8.4e-07 57.8 113 31.0
Ciclev10007065m.g Citrus clementina HOM05D000256 ORTHO05D000119 1.1e-06 57.4 131 28.2
CsaV3_7G025600 Cucumis sativus L. HOM05D000256 ORTHO05D000119 1.1e-06 57.4 121 34.7
Medtr8g094890 Medicago truncatula HOM05D000256 ORTHO05D000119 1.1e-06 57.4 110 30.0
Medtr8g094915 Medicago truncatula HOM05D000256 ORTHO05D000119 1.1e-06 57.4 110 30.0
Thhalv10027477m.g Eutrema salsugineum HOM05D000256 ORTHO05D000119 1.4e-06 57.0 126 27.8
Gorai.004G224400 Gossypium raimondii HOM05D000256 ORTHO05D000119 1.4e-06 57.0 113 30.1
Gorai.004G224600 Gossypium raimondii HOM05D000256 ORTHO05D000119 1.4e-06 57.0 118 29.7
PSO170G1809 Papaver somniferum HOM05D000256 ORTHO05D000119 1.4e-06 57.0 119 26.9
Phvul.008G063400 Phaseolus vulgaris HOM05D000256 ORTHO05D000119 1.4e-06 57.0 111 32.4
Phvul.010G083500 Phaseolus vulgaris HOM05D000256 ORTHO05D000119 1.4e-06 57.0 134 26.9
PGR083G1396 Punica granatum HOM05D000256 ORTHO05D000119 1.4e-06 57.0 105 31.4
TAR362G1185 Trochodendron aralioides HOM05D000256 ORTHO05D000119 1.4e-06 57.0 139 26.6
Aqoxy3G02792 Aquilegia oxysepala HOM05D000256 ORTHO05D000119 1.9e-06 56.6 131 32.1
ClCG09G009370 Citrullus lanatus HOM05D000256 ORTHO05D000119 1.9e-06 56.6 105 29.5
Phvul.008G123100 Phaseolus vulgaris HOM05D000256 ORTHO05D000119 1.9e-06 56.6 90 36.7
SalBow1G3303 Salvia bowleyana HOM05D000256 ORTHO05D000119 1.9e-06 56.6 138 30.4
SalBow7G2474 Salvia bowleyana HOM05D000256 ORTHO05D000119 1.9e-06 56.6 138 30.4
Sed0017675 Sechium edule HOM05D000256 ORTHO05D000119 1.9e-06 56.6 136 33.8
TAR362G0888 Trochodendron aralioides HOM05D000256 ORTHO05D000119 1.9e-06 56.6 104 32.7
Aqoxy4G00684 Aquilegia oxysepala HOM05D000256 ORTHO05D000119 2.4e-06 56.2 114 23.7
Ciclev10006552m.g Citrus clementina HOM05D000256 ORTHO05D000119 2.4e-06 56.2 136 30.1
Phvul.008G131900 Phaseolus vulgaris HOM05D000256 ORTHO05D000119 2.4e-06 56.2 110 37.3
Prupe.1G062500 Prunus persica HOM05D000256 ORTHO05D000119 2.4e-06 56.2 140 30.0
QL01p019403 Quercus lobata HOM05D000256 ORTHO05D000119 2.4e-06 56.2 100 31.0
A03p58670 Brassica napus HOM05D000256 ORTHO05D000119 3.2e-06 55.8 113 30.1
BraA03t14928Z Brassica rapa HOM05D000256 ORTHO05D000119 3.2e-06 55.8 113 30.1
Cfa014872 Carpinus fangiana HOM05D000256 ORTHO05D000119 3.2e-06 55.8 136 26.5
Migut.F00958 Erythranthe guttata HOM05D000256 ORTHO05D000119 3.2e-06 55.8 75 37.3
Migut.G00603 Erythranthe guttata HOM05D005430 ORTHO05D007814 3.2e-06 55.8 114 28.9
FAN24G1258 Fragaria x ananassa HOM05D009280 ORTHO05D012103 3.2e-06 55.8 102 32.4
Gorai.007G244400 Gossypium raimondii HOM05D000256 ORTHO05D000119 3.2e-06 55.8 111 30.6
Gorai.009G390100 Gossypium raimondii HOM05D000256 ORTHO05D000119 3.2e-06 55.8 115 30.4
Manes.09G044300 Manihot esculenta HOM05D000256 ORTHO05D000119 3.2e-06 55.8 136 26.5
Phvul.003G123700 Phaseolus vulgaris HOM05D000256 ORTHO05D000119 3.2e-06 55.8 90 38.9
Ciclev10023991m.g Citrus clementina HOM05D000256 ORTHO05D000119 4.2e-06 55.5 113 31.9
Migut.N02440 Erythranthe guttata HOM05D000256 ORTHO05D000119 4.2e-06 55.5 136 26.5
Eucgr.H00099 Eucalyptus grandis HOM05D010815 ORTHO05D011855 4.2e-06 55.5 113 29.2
Lalb_Chr18g0044391 Lupinus albus HOM05D000256 ORTHO05D000119 4.2e-06 55.5 112 27.7
Sc18g0002440 Simmondsia chinensis HOM05D000256 ORTHO05D000119 4.2e-06 55.5 90 35.6
VMungo0420G0002 Vigna mungo HOM05D000256 ORTHO05D000119 4.2e-06 55.5 134 26.9
Thhalv10027197m.g Eutrema salsugineum HOM05D000256 ORTHO05D000119 5.4e-06 55.1 117 29.1
Gohir.D05G357520 Gossypium hirsutum HOM05D000256 ORTHO05D000119 5.4e-06 55.1 115 29.6
Gohir.D05G357766 Gossypium hirsutum HOM05D000256 ORTHO05D000119 5.4e-06 55.1 115 30.4
Gorai.009G389900 Gossypium raimondii HOM05D000256 ORTHO05D000119 5.4e-06 55.1 115 29.6
Phvul.008G064200 Phaseolus vulgaris HOM05D000256 ORTHO05D000119 5.4e-06 55.1 89 37.1
ClCG07G001680 Citrullus lanatus HOM05D000256 ORTHO05D000119 7.1e-06 54.7 120 24.2
Ciclev10006952m.g Citrus clementina HOM05D000256 ORTHO05D000119 7.1e-06 54.7 102 35.3
Glyma.01G142100 Glycine max HOM05D000256 ORTHO05D000119 7.1e-06 54.7 144 27.1
Lalb_Chr15g0076181 Lupinus albus HOM05D000256 ORTHO05D000119 7.1e-06 54.7 128 29.7
MD06G1010600 Malus domestica HOM05D000256 ORTHO05D000119 7.1e-06 54.7 141 25.5
Medtr1g041445 Medicago truncatula HOM05D000256 ORTHO05D000119 7.1e-06 54.7 74 35.1
PSO541G1549 Papaver somniferum HOM05D000256 ORTHO05D000119 7.1e-06 54.7 126 27.0
Aqoxy3G01490 Aquilegia oxysepala HOM05D000256 ORTHO05D000119 9.2e-06 54.3 93 33.3
AT4G16195 Arabidopsis thaliana HOM05D000256 ORTHO05D000119 9.2e-06 54.3 113 32.7
Ciclev10007106m.g Citrus clementina HOM05D000256 ORTHO05D000119 9.2e-06 54.3 117 29.1
FAN24G0177 Fragaria x ananassa HOM05D000070 ORTHO05D003190 9.2e-06 54.3 99 32.3
Gohir.A08G193416 Gossypium hirsutum HOM05D000256 ORTHO05D000119 9.2e-06 54.3 63 42.9
Lalb_Chr18g0044311 Lupinus albus HOM05D000256 ORTHO05D000119 9.2e-06 54.3 91 37.4
SalBow7G0504 Salvia bowleyana HOM05D000256 ORTHO05D000119 9.2e-06 54.3 123 34.1
SalBow7G1990 Salvia bowleyana HOM05D000256 ORTHO05D000119 9.2e-06 54.3 123 34.1
VMungo0464G1412 Vigna mungo HOM05D000256 ORTHO05D000119 9.2e-06 54.3 89 34.8


User provided reference genes

Program Settings