Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.14G142800 Manihot esculenta HOM05D006346 ORTHO05D007910 0.0e+00 1160.6 582 100.0
Potri.018G103700 Populus trichocarpa HOM05D006346 ORTHO05D007910 2.0e-258 895.6 578 78.5
Sabra18G0089100 Salix brachista HOM05D006346 ORTHO05D007910 8.6e-249 863.6 621 72.3
Atru.chr7.350 Acer truncatum HOM05D006346 ORTHO05D007910 2.2e-244 849.0 570 75.1
Cfa020798 Carpinus fangiana HOM05D006346 ORTHO05D007910 3.9e-241 838.2 576 73.8
COL.COLO4_23953 Corchorus olitorius HOM05D006346 ORTHO05D007910 2.5e-240 835.5 565 75.0
QL02p093888 Quercus lobata HOM05D006346 ORTHO05D007910 7.3e-240 833.9 585 73.3
Thecc.09G152100 Theobroma cacao HOM05D006346 ORTHO05D007910 1.6e-239 832.8 570 74.6
Haze_19155 Corylus avellana HOM05D006346 ORTHO05D007910 3.4e-237 825.1 614 69.5
CiPaw.15G165500 Carya illinoinensis HOM05D006346 ORTHO05D007910 5.4e-235 817.8 579 72.2
TWI34G0405 Tripterygium wilfordii HOM05D006346 ORTHO05D007910 6.0e-234 814.3 577 73.1
Dinv42829 Davidia involucrata HOM05D006346 ORTHO05D007910 3.0e-233 812.0 575 72.0
Dinv43271 Davidia involucrata HOM05D006346 ORTHO05D007910 3.0e-233 812.0 575 72.0
Gohir.A04G059826 Gossypium hirsutum HOM05D006346 ORTHO05D007910 8.7e-233 810.4 573 72.6
Gorai.012G099000 Gossypium raimondii HOM05D006346 ORTHO05D007910 4.3e-232 808.1 573 72.1
Ciclev10007623m.g Citrus clementina HOM05D006346 ORTHO05D007910 6.9e-230 800.8 576 71.2
Hma1.2p1_0028F.1_g017690 Hydrangea macrophylla HOM05D006346 ORTHO05D007910 6.9e-230 800.8 573 70.2
Gohir.D04G088700 Gossypium hirsutum HOM05D006346 ORTHO05D007910 9.0e-230 800.4 573 71.7
Prupe.7G265700 Prunus persica HOM05D006346 ORTHO05D007910 1.2e-229 800.0 579 71.0
MD02G1005300 Malus domestica HOM05D006346 ORTHO05D007910 4.9e-228 794.7 571 70.8
Lj9A719T56 Lonicera japonica HOM05D006346 ORTHO05D007910 1.4e-227 793.1 569 70.7
RcHm_v2.0_Chr2g0085271 Rosa chinensis HOM05D006346 ORTHO05D007910 4.2e-227 791.6 577 69.8
FAN28G1995 Fragaria x ananassa HOM05D006346 ORTHO05D007910 1.2e-226 790.0 543 72.4
FvH4_1g00650 Fragaria vesca HOM05D006346 ORTHO05D007910 3.5e-226 788.5 543 72.2
Nn8g39991 Nelumbo nucifera HOM05D006346 ORTHO05D007910 3.5e-226 788.5 576 69.1
CSS0042716 Camellia sinensis var. sinensis HOM05D006346 ORTHO05D007910 4.6e-226 788.1 545 73.0
Glyma.07G102300 Glycine max HOM05D006346 ORTHO05D007910 3.0e-225 785.4 551 72.2
CANSAT11G2498 Cannabis sativa HOM05D006346 ORTHO05D007910 5.1e-225 784.6 587 70.0
FAN26G0534 Fragaria x ananassa HOM05D006346 ORTHO05D007910 1.9e-224 782.7 542 72.0
Lalb_Chr08g0234231 Lupinus albus HOM05D006346 ORTHO05D007910 3.6e-223 778.5 545 72.7
PGR102G0252 Punica granatum HOM05D006346 ORTHO05D007910 8.1e-223 777.3 583 69.1
FAN23G2716 Fragaria x ananassa HOM05D006346 ORTHO05D007910 1.2e-221 773.5 573 68.6
Nitab4.5_0003551g0040 Nicotiana tabacum HOM05D006346 ORTHO05D007910 3.4e-221 771.9 581 67.1
CsaV3_2G007650 Cucumis sativus L. HOM05D006346 ORTHO05D007910 7.6e-221 770.8 575 68.3
Rhsim01G0026600 Rhododendron simsii HOM05D006346 ORTHO05D007910 9.9e-221 770.4 577 67.8
Sed0021167 Sechium edule HOM05D006346 ORTHO05D007910 4.9e-220 768.1 539 70.7
arahy.Tifrunner.gnm1.ann1.VMKR8Z Arachis hypogaea HOM05D006346 ORTHO05D007910 6.4e-220 767.7 556 69.6
Lj6g0013256 Lotus japonicus HOM05D006346 ORTHO05D007910 6.4e-220 767.7 549 71.2
arahy.Tifrunner.gnm1.ann1.ID3JIZ Arachis hypogaea HOM05D006346 ORTHO05D007910 1.1e-219 766.9 556 69.4
Medtr8g467050 Medicago truncatula HOM05D006346 ORTHO05D007910 5.5e-219 764.6 555 71.4
Sc14g0000950 Simmondsia chinensis HOM05D006346 ORTHO05D007910 5.5e-219 764.6 576 68.8
Phvul.003G072700 Phaseolus vulgaris HOM05D006346 ORTHO05D007910 7.1e-219 764.2 554 71.1
THA.LOC104803912 Tarenaya hassleriana HOM05D006346 ORTHO05D007910 9.3e-219 763.8 587 67.1
Sopen07g001980 Solanum pennellii HOM05D006346 ORTHO05D007910 2.7e-218 762.3 562 67.8
AL7G21400 Arabidopsis lyrata HOM05D006346 ORTHO05D007910 7.9e-218 760.8 559 68.7
DCAR_019414 Daucus carota HOM05D006346 ORTHO05D007910 7.9e-218 760.8 575 69.0
HanXRQChr10g0313691 Helianthus annuus HOM05D006346 ORTHO05D007910 7.9e-218 760.8 576 67.7
GSVIVG01008451001 Vitis vinifera HOM05D006346 ORTHO05D007910 7.9e-218 760.8 578 68.3
BcaNung01563 Brassica carinata HOM05D006346 ORTHO05D007910 1.3e-217 760.0 568 68.1
C07p58190 Brassica napus HOM05D006346 ORTHO05D007910 1.8e-217 759.6 572 67.5
Thhalv10024548m.g Eutrema salsugineum HOM05D006346 ORTHO05D007910 2.3e-217 759.2 559 69.1
Hund08940 Selenicereus undatus HOM05D006346 ORTHO05D007910 3.9e-217 758.4 577 66.9
BcaNung02744 Brassica carinata HOM05D006346 ORTHO05D007910 6.7e-217 757.7 572 67.3
ECA234G1139 Erigeron canadensis HOM05D006346 ORTHO05D007910 6.7e-217 757.7 544 68.8
MSTRG.6156 Avicennia marina HOM05D006346 ORTHO05D007910 1.1e-216 756.9 577 66.4
Cc06_g14630 Coffea canephora HOM05D006346 ORTHO05D007910 1.1e-216 756.9 578 67.8
Lsat_1_v5_gn_5_89421 Lactuca sativa HOM05D006346 ORTHO05D007910 1.1e-216 756.9 572 67.5
AT4G30720 Arabidopsis thaliana HOM05D006346 ORTHO05D007910 1.5e-216 756.5 560 68.8
A03p60280 Brassica napus HOM05D006346 ORTHO05D007910 1.5e-216 756.5 572 67.0
BraA03t15070Z Brassica rapa HOM05D006346 ORTHO05D007910 1.5e-216 756.5 572 67.1
PSO782G0769 Papaver somniferum HOM05D006346 ORTHO05D007910 3.3e-216 755.4 546 68.5
BolC7t46278H Brassica oleracea HOM05D006346 ORTHO05D007910 9.6e-216 753.8 566 67.0
ClCG02G014350 Citrullus lanatus HOM05D006346 ORTHO05D007910 2.8e-215 752.3 601 66.2
PSO063G0785 Papaver somniferum HOM05D006346 ORTHO05D007910 4.8e-215 751.5 546 67.9
Aqoxy7G03359 Aquilegia oxysepala HOM05D006346 ORTHO05D007910 1.1e-214 750.4 569 68.9
Carub.0007s0978 Capsella rubella HOM05D006346 ORTHO05D007910 1.1e-214 750.4 581 66.6
Psat4g134640 Pisum sativum HOM05D006346 ORTHO05D007910 1.1e-214 750.4 542 71.0
vmacro16782 Vaccinium macrocarpon HOM05D006346 ORTHO05D007910 2.4e-214 749.2 575 67.3
Sp7g28630 Schrenkiella parvula HOM05D006346 ORTHO05D007910 6.9e-214 747.7 571 67.3
CAN.G160.15 Capsicum annuum HOM05D006346 ORTHO05D007910 1.5e-213 746.5 575 66.6
Nitab4.5_0002611g0100 Nicotiana tabacum HOM05D006346 ORTHO05D007910 1.7e-212 743.0 577 66.0
EL10Ac8g18923 Beta vulgaris HOM05D006346 ORTHO05D007910 2.2e-212 742.7 599 66.1
Aa31LG2G19630 Aethionema arabicum HOM05D006346 ORTHO05D007910 2.9e-212 742.3 557 66.8
Ca_22901_v3 Cicer arietinum L. HOM05D006346 ORTHO05D007910 4.9e-212 741.5 541 70.8
AUR62028356 Chenopodium quinoa HOM05D006346 ORTHO05D007910 2.1e-210 736.1 546 68.7
MELO3C004121.2 Cucumis melo HOM05D006346 ORTHO05D007910 5.7e-208 728.0 586 64.8
Migut.J01382 Erythranthe guttata HOM05D006346 ORTHO05D007910 4.8e-207 724.9 550 67.1
SGA_v2.0_scaffold45G17017 Striga asiatica HOM05D006346 ORTHO05D007910 2.6e-205 719.2 577 63.6
Zm00001eb288040 Zea mays HOM05D006346 ORTHO05D007910 2.3e-201 706.1 548 65.0
Os05g0411200 Oryza sativa ssp. japonica HOM05D006346 ORTHO05D007910 2.5e-200 702.6 545 67.2
HPP92_020605 Vanilla planifolia HOM05D006346 ORTHO05D007910 1.2e-197 693.7 559 62.3
Actinidia38309 Actinidia chinensis HOM05D006346 ORTHO05D007910 6.5e-196 688.0 471 72.4
Oeu052219.3 Olea europaea HOM05D006346 ORTHO05D007910 1.4e-195 686.8 625 58.6
CDE12G0948 Ceratophyllum demersum HOM05D006346 ORTHO05D007910 2.8e-191 672.5 549 63.4
Solyc07g005870.3 Solanum lycopersicum HOM05D006346 ORTHO05D007910 8.2e-191 671.0 562 62.6
Peaxi162Scf00401g00218 Petunia axillaris HOM05D006346 ORTHO05D007910 9.1e-190 667.5 583 61.2
ATR0739G030 Amborella trichopoda HOM05D006346 ORTHO05D007910 5.9e-189 664.8 465 70.8
Ah.09g228750 Amaranthus hybridus HOM05D006346 ORTHO05D007910 1.9e-179 633.3 547 62.0
Hma1.2p1_0028F.1_g017700 Hydrangea macrophylla HOM05D006346 ORTHO05D007910 2.0e-173 613.2 435 70.1
unitig_37.g12649 Utricularia gibba HOM05D006346 ORTHO05D007910 5.5e-171 605.1 504 60.7
SalBow1G6401 Salvia bowleyana HOM05D006346 ORTHO05D007910 1.4e-169 600.5 442 67.0
TAR383G0381 Trochodendron aralioides HOM05D006346 ORTHO05D007910 4.4e-152 542.3 420 67.4
TPR.G10032 Trifolium pratense HOM05D006346 ORTHO05D007910 5.7e-152 542.0 403 70.5
SMO146G0018 Selaginella moellendorffii HOM05D006346 ORTHO05D007910 3.6e-146 522.7 514 53.5
Mapoly0021s0085 Marchantia polymorpha HOM05D006346 ORTHO05D007910 3.7e-143 512.7 548 50.5
Pp3c23_14180 Physcomitrium patens HOM05D006346 ORTHO05D007910 6.4e-143 511.9 516 52.7
AagrBONN_evm.TU.Sc2ySwM_344.1120 Anthoceros agrestis HOM05D006346 ORTHO05D007910 3.9e-140 502.7 548 49.3
Cpa.g.sc46.182 Carica papaya HOM05D006346 ORTHO05D007910 1.1e-121 441.4 268 80.2
Eucgr.C02507 Eucalyptus grandis HOM05D006346 ORTHO05D007910 1.6e-114 417.5 289 70.6
PRCOL_00000449 Prasinoderma coloniale HOM05D006346 ORTHO05D007910 5.6e-107 392.5 511 46.2
Glyma.04G155100 Glycine max HOM05D006346 ORTHO05D007910 1.7e-103 380.9 270 68.9
MCO14G279 Micromonas commoda HOM05D006346 ORTHO05D007910 5.1e-100 369.4 371 52.6
Cre17.g744997 Chlamydomonas reinhardtii HOM05D006346 ORTHO05D007910 6.7e-100 369.0 619 38.3
Eucgr.C02508 Eucalyptus grandis HOM05D006346 ORTHO05D007910 4.3e-99 366.3 318 62.9
Cpa.g.sc46.183 Carica papaya HOM05D006346 ORTHO05D007910 1.6e-93 347.8 286 64.3
CAN.G160.19 Capsicum annuum HOM05D006346 ORTHO05D007910 3.7e-90 336.7 462 43.9
AUR62025356 Chenopodium quinoa HOM05D006346 ORTHO05D007910 9.0e-89 332.0 284 62.7
CARHR238600 Cardamine hirsuta HOM05D006346 ORTHO05D007910 4.8e-82 309.7 265 61.1
VMungo0251G1020 Vigna mungo HOM05D006346 ORTHO05D007910 6.3e-58 229.6 142 75.4
Actinidia24372 Actinidia chinensis HOM05D006346 ORTHO05D007910 9.8e-43 179.1 453 30.9
Glyma.04G155150 Glycine max HOM05D006346 ORTHO05D007910 8.3e-42 176.0 146 64.4
TAR383G0466 Trochodendron aralioides HOM05D006346 ORTHO05D007910 1.7e-39 168.3 93 86.0
SEGI_30041 Sequoiadendron giganteum HOM05D006346 ORTHO05D007910 4.9e-34 150.2 102 68.6
Glyma.04G155200 Glycine max HOM05D006346 ORTHO05D007910 8.9e-28 129.4 116 62.9
MD15G1149600 Malus domestica HOM05D006346 ORTHO05D007910 8.9e-28 129.4 254 37.4
SalBow1G2918 Salvia bowleyana HOM05D006346 ORTHO05D007910 2.6e-27 127.9 99 66.7
PGSC0003DMG400011203 Solanum tuberosum HOM05D006346 ORTHO05D007910 4.1e-25 120.6 72 81.9
AUR62025355 Chenopodium quinoa HOM05D006346 ORTHO05D007910 1.0e-23 115.9 70 78.6
SEGI_23921 Sequoiadendron giganteum HOM05D006346 ORTHO05D007910 3.6e-21 107.5 117 50.4
ECA238G2318 Erigeron canadensis HOM05D006346 ORTHO05D007910 1.2e-19 102.4 68 66.2
Rhsim01G0141500 Rhododendron simsii HOM05D006319 ORTHO05D007963 1.2e-16 92.4 165 41.8
HanXRQChr01g0001911 Helianthus annuus HOM05D006346 ORTHO05D007910 2.1e-16 91.7 53 75.5
CAN.G1961.3 Capsicum annuum HOM05D006346 ORTHO05D007910 1.3e-15 89.0 57 77.2
A05p44400 Brassica napus HOM05D034890 ORTHO05D100541 1.3e-10 72.4 68 52.9


User provided reference genes

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