Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.14G142700 Manihot esculenta HOM05D006914 ORTHO05D008583 4.3e-50 201.1 103 100.0
Potri.006G181400 Populus trichocarpa HOM05D006914 ORTHO05D008583 1.8e-40 169.1 100 85.0
Nn8g40004 Nelumbo nucifera HOM05D006914 ORTHO05D008583 1.5e-39 166.0 100 82.0
Gohir.D08G256600 Gossypium hirsutum HOM05D006914 ORTHO05D008583 4.4e-39 164.5 97 83.5
Gorai.004G273700 Gossypium raimondii HOM05D006914 ORTHO05D008583 4.4e-39 164.5 97 83.5
Atru.chr7.325 Acer truncatum HOM05D006914 ORTHO05D008583 7.5e-39 163.7 100 83.0
AUR62015440 Chenopodium quinoa HOM05D006914 ORTHO05D008583 2.2e-38 162.2 100 81.0
Lsat_1_v5_gn_7_49520 Lactuca sativa HOM05D006914 ORTHO05D008583 2.2e-38 162.2 97 82.5
Hund04582 Selenicereus undatus HOM05D000185 ORTHO05D000105 2.9e-38 161.8 99 83.8
HanXRQChr03g0066101 Helianthus annuus HOM05D006914 ORTHO05D008583 3.7e-38 161.4 97 83.5
EL10Ac3g05865 Beta vulgaris HOM05D006914 ORTHO05D008583 4.9e-38 161.0 100 81.0
CSS0049762 Camellia sinensis var. sinensis HOM05D006914 ORTHO05D008583 8.3e-38 160.2 97 80.4
RcHm_v2.0_Chr2g0085261 Rosa chinensis HOM05D006914 ORTHO05D008583 8.3e-38 160.2 97 82.5
Thecc.09G152600 Theobroma cacao HOM05D006914 ORTHO05D008583 8.3e-38 160.2 97 81.4
Ah.13g066550 Amaranthus hybridus HOM05D006914 ORTHO05D008583 1.4e-37 159.5 99 79.8
Ciclev10009995m.g Citrus clementina HOM05D006914 ORTHO05D008583 1.9e-37 159.1 97 80.4
FAN23G1758 Fragaria x ananassa HOM05D006914 ORTHO05D008583 2.4e-37 158.7 97 80.4
Cpa.g.sc46.184 Carica papaya HOM05D006914 ORTHO05D008583 3.2e-37 158.3 97 82.5
GSVIVG01008452001 Vitis vinifera HOM05D006914 ORTHO05D008583 4.1e-37 157.9 101 77.2
Dinv41349 Davidia involucrata HOM05D006914 ORTHO05D008583 5.4e-37 157.5 97 78.4
Hma1.2p1_2085F.1_g313670 Hydrangea macrophylla HOM05D006914 ORTHO05D008583 9.2e-37 156.8 99 77.8
Nitab4.5_0009003g0040 Nicotiana tabacum HOM05D006914 ORTHO05D008583 9.2e-37 156.8 96 80.2
ECA240G0809 Erigeron canadensis HOM05D006914 ORTHO05D008583 1.2e-36 156.4 95 81.1
FAN26G2758 Fragaria x ananassa HOM05D006914 ORTHO05D008583 1.2e-36 156.4 97 79.4
AUR62002229 Chenopodium quinoa HOM05D006914 ORTHO05D008583 1.6e-36 156.0 98 78.6
CiPaw.15G165400 Carya illinoinensis HOM05D006914 ORTHO05D008583 2.1e-36 155.6 100 78.0
FvH4_1g00640 Fragaria vesca HOM05D006914 ORTHO05D008583 2.1e-36 155.6 98 79.6
COL.COLO4_23940 Corchorus olitorius HOM05D006914 ORTHO05D008583 4.6e-36 154.5 95 81.1
Duzib150G1072 Durio zibethinus HOM05D006914 ORTHO05D008583 4.6e-36 154.5 98 78.6
MD15G1149500 Malus domestica HOM05D006914 ORTHO05D008583 6.0e-36 154.1 97 79.4
CANSAT56G0295 Cannabis sativa HOM05D006914 ORTHO05D008583 7.8e-36 153.7 98 77.6
Duzib187G0910 Durio zibethinus HOM05D006914 ORTHO05D008583 1.3e-35 152.9 95 80.0
Prupe.7G265800 Prunus persica HOM05D006914 ORTHO05D008583 1.3e-35 152.9 97 79.4
PGR102G2895 Punica granatum HOM05D006914 ORTHO05D008583 1.3e-35 152.9 97 77.3
Cfa020795 Carpinus fangiana HOM05D006914 ORTHO05D008583 1.7e-35 152.5 99 73.7
MD02G1005200 Malus domestica HOM05D006914 ORTHO05D008583 2.3e-35 152.1 97 78.4
TWI34G0278 Tripterygium wilfordii HOM05D006914 ORTHO05D008583 2.3e-35 152.1 100 76.0
Actinidia23563 Actinidia chinensis HOM05D006914 ORTHO05D008583 3.0e-35 151.8 95 80.0
Nitab4.5_0001448g0020 Nicotiana tabacum HOM05D006914 ORTHO05D008583 3.0e-35 151.8 96 77.1
Aqoxy5G02159 Aquilegia oxysepala HOM05D006914 ORTHO05D008583 3.9e-35 151.4 101 75.2
Glyma.04G155300 Glycine max HOM05D006914 ORTHO05D008583 1.1e-34 149.8 100 74.0
MELO3C004120.2 Cucumis melo HOM05D006914 ORTHO05D008583 1.5e-34 149.4 97 77.3
TPR.G25932 Trifolium pratense HOM05D006914 ORTHO05D008583 1.5e-34 149.4 100 72.0
CsaV3_2G007660 Cucumis sativus L. HOM05D006914 ORTHO05D008583 1.9e-34 149.1 95 78.9
Lalb_Chr11g0072501 Lupinus albus HOM05D006914 ORTHO05D008583 1.9e-34 149.1 100 74.0
QL02p093962 Quercus lobata HOM05D006914 ORTHO05D008583 1.9e-34 149.1 96 76.0
TWI63G1652 Tripterygium wilfordii HOM05D006914 ORTHO05D008583 1.9e-34 149.1 100 74.0
Ca_02367_v3 Cicer arietinum L. HOM05D006914 ORTHO05D008583 2.5e-34 148.7 98 74.5
ClCG02G014340 Citrullus lanatus HOM05D006914 ORTHO05D008583 4.3e-34 147.9 97 76.3
Nitab4.5_0000233g0040 Nicotiana tabacum HOM05D006914 ORTHO05D008583 4.3e-34 147.9 96 76.0
VMungo0720G1978 Vigna mungo HOM05D006914 ORTHO05D008583 5.6e-34 147.5 100 72.0
Cc06_g14590 Coffea canephora HOM05D006914 ORTHO05D008583 7.3e-34 147.1 96 74.0
DCAR_019414 Daucus carota HOM05D006346 ORTHO05D007910 1.6e-33 146.0 98 71.4
Glyma.06G225000 Glycine max HOM05D006914 ORTHO05D008583 3.6e-33 144.8 100 72.0
Phvul.007G242700 Phaseolus vulgaris HOM05D006914 ORTHO05D008583 3.6e-33 144.8 100 71.0
TAR383G0505 Trochodendron aralioides HOM05D006914 ORTHO05D008583 3.6e-33 144.8 92 77.2
Peaxi162Scf00156g01316 Petunia axillaris HOM05D006914 ORTHO05D008583 4.7e-33 144.4 91 78.0
Actinidia28379 Actinidia chinensis HOM05D006914 ORTHO05D008583 1.1e-32 143.3 95 76.8
Sed0012601 Sechium edule HOM05D006914 ORTHO05D008583 1.4e-32 142.9 97 73.2
PSO111G0010 Papaver somniferum HOM05D006914 ORTHO05D008583 1.8e-32 142.5 100 72.0
Medtr2g046160 Medicago truncatula HOM05D006914 ORTHO05D008583 2.3e-32 142.1 100 68.0
Oeu055276.1 Olea europaea HOM05D006914 ORTHO05D008583 6.8e-32 140.6 97 73.2
Sed0026010 Sechium edule HOM05D006914 ORTHO05D008583 8.9e-32 140.2 97 72.2
Migut.K00305 Erythranthe guttata HOM05D006914 ORTHO05D008583 1.5e-31 139.4 95 70.5
AT5G57860 Arabidopsis thaliana HOM05D006914 ORTHO05D008583 2.6e-31 138.7 92 73.9
Oeu021334.1 Olea europaea HOM05D006914 ORTHO05D008583 2.6e-31 138.7 96 72.9
Sp6g19550 Schrenkiella parvula HOM05D006914 ORTHO05D008583 2.6e-31 138.7 92 75.0
MSTRG.10711 Avicennia marina HOM05D006914 ORTHO05D008583 3.4e-31 138.3 98 70.4
ATR0763G197 Amborella trichopoda HOM05D006914 ORTHO05D008583 4.4e-31 137.9 97 73.2
AL8G33910 Arabidopsis lyrata HOM05D006914 ORTHO05D008583 7.5e-31 137.1 90 75.6
Psat1g017920 Pisum sativum HOM05D006914 ORTHO05D008583 7.5e-31 137.1 94 70.2
Sopen05g034470 Solanum pennellii HOM05D006914 ORTHO05D008583 9.9e-31 136.7 89 74.2
Thhalv10015128m.g Eutrema salsugineum HOM05D006914 ORTHO05D008583 1.3e-30 136.3 92 72.8
Lj6g0027463 Lotus japonicus HOM05D006914 ORTHO05D008583 1.3e-30 136.3 98 66.3
Carub.0008s1839 Capsella rubella HOM05D006914 ORTHO05D008583 1.7e-30 136.0 92 72.8
CARHR271600 Cardamine hirsuta HOM05D006914 ORTHO05D008583 1.7e-30 136.0 92 73.9
C02p13800 Brassica napus HOM05D006914 ORTHO05D008583 1.9e-29 132.5 90 73.3
BolC2t07499H Brassica oleracea HOM05D006914 ORTHO05D008583 1.9e-29 132.5 90 73.3
A03p12500 Brassica napus HOM05D006914 ORTHO05D008583 5.4e-29 131.0 92 70.7
C09p49750 Brassica napus HOM05D006914 ORTHO05D008583 7.1e-29 130.6 92 70.7
A02p08150 Brassica napus HOM05D006914 ORTHO05D008583 9.2e-29 130.2 92 70.7
BraA03t10565Z Brassica rapa HOM05D006914 ORTHO05D008583 6.0e-28 127.5 90 70.0
Aa31LG3G13700 Aethionema arabicum HOM05D006914 ORTHO05D008583 7.8e-28 127.1 92 68.5
BolC3t13912H Brassica oleracea HOM05D006914 ORTHO05D008583 7.8e-28 127.1 90 70.0
CDE05G0490 Ceratophyllum demersum HOM05D006914 ORTHO05D008583 1.7e-27 125.9 97 63.9
HPP92_020604 Vanilla planifolia HOM05D006914 ORTHO05D008583 1.7e-27 125.9 91 68.1
Os03g0364000 Oryza sativa ssp. japonica HOM05D006914 ORTHO05D008583 2.3e-27 125.6 94 69.1
unitig_748.g7196 Utricularia gibba HOM05D006914 ORTHO05D008583 2.3e-27 125.6 89 67.4
TAR626G0439 Trochodendron aralioides HOM05D006914 ORTHO05D008583 9.5e-26 120.2 76 78.9
Zm00001eb329210 Zea mays HOM05D006914 ORTHO05D008583 1.6e-25 119.4 93 63.4
PSO782G4630 Papaver somniferum HOM05D006914 ORTHO05D008583 3.6e-25 118.2 100 61.0
Rhsim03G0258700 Rhododendron simsii HOM05D000079 ORTHO05D000211 8.1e-25 117.1 76 77.6
PGSC0003DMG400023462 Solanum tuberosum HOM05D006914 ORTHO05D008583 4.0e-24 114.8 76 75.0
Haze_19153 Corylus avellana HOM05D006914 ORTHO05D008583 8.9e-24 113.6 76 73.7
CAN.G694.81 Capsicum annuum HOM05D006914 ORTHO05D008583 1.2e-23 113.2 80 75.0
vmacro06059 Vaccinium macrocarpon HOM05D000079 ORTHO05D000211 1.2e-23 113.2 75 76.0
BcaB05g22379 Brassica carinata HOM05D006914 ORTHO05D008583 2.6e-23 112.1 90 66.7
BraA02t05889Z Brassica rapa HOM05D006914 ORTHO05D008583 3.4e-23 111.7 79 73.4
Eucgr.C02509 Eucalyptus grandis HOM05D006914 ORTHO05D008583 3.4e-23 111.7 76 73.7
arahy.Tifrunner.gnm1.ann1.S2MTQV Arachis hypogaea HOM05D006914 ORTHO05D008583 1.3e-22 109.8 74 75.7
arahy.Tifrunner.gnm1.ann1.6E7PQ4 Arachis hypogaea HOM05D006914 ORTHO05D008583 2.9e-22 108.6 74 74.3
SGA_v2.0_scaffold222G42803 Striga asiatica HOM05D006914 ORTHO05D008583 1.4e-21 106.3 75 72.0
Pp3c19_17380 Physcomitrium patens HOM05D006914 ORTHO05D008583 1.2e-20 103.2 92 58.7
AagrBONN_evm.TU.Sc2ySwM_362.2477 Anthoceros agrestis HOM05D006914 ORTHO05D008583 1.6e-20 102.8 92 60.9
Gohir.A08G236100 Gossypium hirsutum HOM05D006914 ORTHO05D008583 1.6e-20 102.8 71 69.0
Mapoly0004s0198 Marchantia polymorpha HOM05D006914 ORTHO05D008583 1.6e-20 102.8 78 69.2
SMO304G0019 Selaginella moellendorffii HOM05D006914 ORTHO05D008583 6.6e-19 97.4 73 67.1
Sc13g0007320 Simmondsia chinensis HOM05D006914 ORTHO05D008583 1.5e-18 96.3 64 78.1
CBR_g51779 Chara braunii HOM05D006914 ORTHO05D008583 4.8e-17 91.3 96 51.0
Cre12.g554750 Chlamydomonas reinhardtii HOM05D006914 ORTHO05D008583 5.8e-15 84.3 86 52.3
AagrBONN_evm.TU.Sc2ySwM_228.3148 Anthoceros agrestis HOM05D006914 ORTHO05D008583 9.9e-15 83.6 78 56.4
Pp3c17_5060 Physcomitrium patens HOM05D006914 ORTHO05D008583 9.9e-15 83.6 98 49.0
Haze_19154 Corylus avellana HOM05D002983 ORTHO05D003451 1.1e-13 80.1 62 69.4
PRCOL_00002080 Prasinoderma coloniale HOM05D006914 ORTHO05D008583 5.4e-13 77.8 86 52.3
SHI02838 Sapria himalayana HOM05D006914 ORTHO05D008583 5.4e-13 77.8 87 49.4
Aa31LG1G14450 Aethionema arabicum HOM05D006914 ORTHO05D008583 2.7e-12 75.5 75 52.0
BcaC04g19922 Brassica carinata HOM05D006914 ORTHO05D008583 2.3e-11 72.4 52 69.2
MCO12G243 Micromonas commoda HOM05D006914 ORTHO05D008583 9.9e-07 57.0 80 41.2
C08p16940 Brassica napus HOM05D006914 ORTHO05D008583 2.9e-06 55.5 37 67.6


User provided reference genes

Program Settings