Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.14G140100 Manihot esculenta HOM05D008006 ORTHO05D010181 4.9e-174 614.4 316 100.0
Potri.018G112900 Populus trichocarpa HOM05D008006 ORTHO05D010181 2.1e-116 422.9 294 75.5
Sabra18G0096000 Salix brachista HOM05D008006 ORTHO05D010181 3.4e-114 415.6 297 73.4
Duzib187G1563 Durio zibethinus HOM05D008006 ORTHO05D010181 7.3e-101 371.3 280 67.1
Cpa.g.sc46.96 Carica papaya HOM05D008006 ORTHO05D010181 1.4e-99 367.1 303 62.4
COL.COLO4_22070 Corchorus olitorius HOM05D008006 ORTHO05D010181 3.4e-98 362.5 286 65.4
Thecc.09G037000 Theobroma cacao HOM05D008006 ORTHO05D010181 1.3e-97 360.5 279 65.9
Gorai.010G110900 Gossypium raimondii HOM05D008006 ORTHO05D010181 2.4e-96 356.3 297 63.6
Gohir.A06G096100 Gossypium hirsutum HOM05D008006 ORTHO05D010181 1.6e-95 353.6 284 64.1
MD15G1157700 Malus domestica HOM05D008006 ORTHO05D010181 2.4e-91 339.7 284 62.0
Prupe.7G252900 Prunus persica HOM05D008006 ORTHO05D010181 9.9e-90 334.3 281 60.1
MELO3C010256.2 Cucumis melo HOM05D008006 ORTHO05D010181 6.4e-89 331.6 275 61.1
Hma1.2p1_0085F.1_g044170 Hydrangea macrophylla HOM05D008006 ORTHO05D010181 8.4e-89 331.3 301 58.8
CsaV3_1G028580 Cucumis sativus L. HOM05D008006 ORTHO05D010181 1.1e-88 330.9 275 61.1
CiPaw.15G179000 Carya illinoinensis HOM05D008006 ORTHO05D010181 1.9e-88 330.1 296 61.5
CANSAT11G1793 Cannabis sativa HOM05D008006 ORTHO05D010181 1.2e-87 327.4 282 58.9
Medtr1g052525 Medicago truncatula HOM05D008006 ORTHO05D010181 1.2e-87 327.4 292 59.9
Phvul.009G208600 Phaseolus vulgaris HOM05D008006 ORTHO05D010181 1.0e-86 324.3 274 61.7
THA.LOC104827422 Tarenaya hassleriana HOM05D008006 ORTHO05D010181 2.3e-86 323.2 286 59.4
Peaxi162Scf00981g00002 Petunia axillaris HOM05D008006 ORTHO05D010181 5.1e-86 322.0 274 62.0
ClCG06G012090 Citrullus lanatus HOM05D008006 ORTHO05D010181 6.6e-86 321.6 275 60.0
CAN.G883.7 Capsicum annuum HOM05D008006 ORTHO05D010181 3.3e-85 319.3 272 61.0
VMungo1309G1328 Vigna mungo HOM05D008006 ORTHO05D010181 4.3e-85 318.9 281 60.1
Oeu023348.1 Olea europaea HOM05D008006 ORTHO05D010181 5.6e-85 318.5 283 59.4
QL02p091617 Quercus lobata HOM05D008006 ORTHO05D010181 1.6e-84 317.0 293 59.4
PGSC0003DMG401009429 Solanum tuberosum HOM05D008006 ORTHO05D010181 1.6e-84 317.0 279 60.6
TAR376G0197 Trochodendron aralioides HOM05D008006 ORTHO05D010181 2.1e-84 316.6 278 59.4
Haze_19299 Corylus avellana HOM05D008006 ORTHO05D010181 3.6e-84 315.8 279 60.2
DCAR_005377 Daucus carota HOM05D008006 ORTHO05D010181 8.1e-84 314.7 274 58.0
Cfa020870 Carpinus fangiana HOM05D008006 ORTHO05D010181 1.4e-83 313.9 279 59.5
Dinv19107 Davidia involucrata HOM05D008006 ORTHO05D007530 1.4e-83 313.9 270 61.5
Sopen02g017480 Solanum pennellii HOM05D008006 ORTHO05D010181 3.1e-83 312.8 279 60.2
Nitab4.5_0000443g0190 Nicotiana tabacum HOM05D008006 ORTHO05D010181 6.9e-83 311.6 277 58.8
Nitab4.5_0000973g0020 Nicotiana tabacum HOM05D008006 ORTHO05D010181 9.0e-83 311.2 277 59.6
PGR142G2664 Punica granatum HOM05D008006 ORTHO05D010181 1.2e-82 310.8 306 57.2
Cc07_g12390 Coffea canephora HOM05D008006 ORTHO05D010181 2.0e-82 310.1 303 54.8
Lsat_1_v5_gn_8_113701 Lactuca sativa HOM05D008006 ORTHO05D010181 2.9e-81 306.2 293 57.3
MSTRG.3655 Avicennia marina HOM05D008006 ORTHO05D010181 4.9e-81 305.4 278 57.6
RcHm_v2.0_Chr2g0086431 Rosa chinensis HOM05D008006 ORTHO05D010181 1.1e-80 304.3 291 56.7
Sed0023235 Sechium edule HOM05D008006 ORTHO05D010181 2.4e-80 303.1 289 55.4
SGA_v2.0_scaffold229G43287 Striga asiatica HOM05D008006 ORTHO05D010181 9.3e-80 301.2 289 55.0
MBI04_g23901_MAGBIO Magnolia biondii HOM05D008006 ORTHO05D010181 1.6e-79 300.4 285 54.7
FvH4_1g01510 Fragaria vesca HOM05D008006 ORTHO05D010181 3.5e-79 299.3 276 57.6
QL02p091673 Quercus lobata HOM05D008006 ORTHO05D010181 1.3e-78 297.4 275 58.9
FAN28G2644 Fragaria x ananassa HOM05D008006 ORTHO05D010181 3.0e-78 296.2 276 57.2
Migut.K01160 Erythranthe guttata HOM05D008006 ORTHO05D010181 1.4e-75 287.3 285 56.1
CSS0020571 Camellia sinensis var. sinensis HOM05D008006 ORTHO05D010181 5.8e-74 282.0 285 56.5
CDE07G0801 Ceratophyllum demersum HOM05D008006 ORTHO05D010181 1.3e-73 280.8 284 52.5
FAN23G1450 Fragaria x ananassa HOM05D008006 ORTHO05D010181 6.4e-73 278.5 291 52.9
Aqoxy6G02620 Aquilegia oxysepala HOM05D008006 ORTHO05D010181 1.1e-72 277.7 299 54.5
unitig_0.g2635 Utricularia gibba HOM05D008006 ORTHO05D010181 9.3e-72 274.6 274 54.4
EL10Ac6g14724 Beta vulgaris HOM05D008006 ORTHO05D010181 6.0e-71 271.9 285 54.0
Sc03g0006000 Simmondsia chinensis HOM05D008006 ORTHO05D010181 3.0e-70 269.6 275 52.4
Ah.07g202950 Amaranthus hybridus HOM05D008006 ORTHO05D010181 2.1e-68 263.5 290 51.0
Gohir.D06G096200 Gossypium hirsutum HOM05D008006 ORTHO05D010181 1.5e-66 257.3 229 60.7
AUR62016258 Chenopodium quinoa HOM05D008006 ORTHO05D010181 3.4e-66 256.1 269 53.9
ATR0605G334 Amborella trichopoda HOM05D008006 ORTHO05D010181 7.6e-66 255.0 277 49.5
Zm00001eb102080 Zea mays HOM05D008006 ORTHO05D010181 1.8e-62 243.8 279 49.8
HPP92_022771 Vanilla planifolia HOM05D008006 ORTHO05D010181 8.7e-62 241.5 293 47.8
SEGI_07410 Sequoiadendron giganteum HOM05D008006 ORTHO05D010181 1.9e-61 240.4 278 47.5
SalBow5G3372 Salvia bowleyana HOM05D008006 ORTHO05D010181 2.4e-59 233.4 287 48.8
Mapoly0054s0065 Marchantia polymorpha HOM05D008006 ORTHO05D010181 1.6e-55 220.7 279 47.3
Actinidia28771 Actinidia chinensis HOM05D008006 ORTHO05D010181 2.9e-49 199.9 220 52.3
HanXRQChr15g0486431 Helianthus annuus HOM05D008006 ORTHO05D010181 8.8e-46 188.3 159 59.7
AUR62003323 Chenopodium quinoa HOM05D002832 ORTHO05D007530 8.2e-44 181.8 138 61.6
Lalb_Chr11g0072821 Lupinus albus HOM05D008006 ORTHO05D010181 1.4e-38 164.5 119 70.6
SMO364G0826 Selaginella moellendorffii HOM05D008006 ORTHO05D010181 1.0e-33 148.3 185 46.5
Solyc02g068350.1 Solanum lycopersicum HOM05D008006 ORTHO05D010181 7.2e-32 142.1 149 51.7
CBR_g4365 Chara braunii HOM05D008006 ORTHO05D010181 4.8e-28 129.4 311 31.8
AUR62043755 Chenopodium quinoa HOM05D008006 ORTHO05D010181 7.7e-26 122.1 84 69.0
FAN26G1902 Fragaria x ananassa HOM05D008006 ORTHO05D010181 9.1e-19 98.6 108 52.8
Cre16.g675000 Chlamydomonas reinhardtii HOM05D008006 ORTHO05D010181 1.7e-17 94.4 293 34.8
Hma1.2p1_2924F.1_g330380 Hydrangea macrophylla HOM05D008006 ORTHO05D010181 5.4e-11 72.8 59 61.0
FAN26G1226 Fragaria x ananassa HOM05D008006 ORTHO05D010181 8.9e-06 55.5 79 41.8


User provided reference genes

Program Settings