Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.14G131100 Manihot esculenta HOM05D006513 ORTHO05D008150 4.2e-104 381.3 188 100.0
Manes.06G049600 Manihot esculenta HOM05D006513 ORTHO05D008150 1.5e-98 362.8 188 95.7
Potri.018G066700 Populus trichocarpa HOM05D006513 ORTHO05D008150 3.0e-86 322.0 189 83.6
TWI34G1228 Tripterygium wilfordii HOM05D006513 ORTHO05D008150 6.7e-86 320.9 188 80.9
Sabra18G0060100 Salix brachista HOM05D006513 ORTHO05D008150 4.4e-85 318.2 189 82.5
CiPaw.03G242700 Carya illinoinensis HOM05D006513 ORTHO05D008150 3.5e-82 308.5 188 78.7
Gorai.001G041200 Gossypium raimondii HOM05D006513 ORTHO05D008150 1.7e-81 306.2 188 78.7
Thecc.09G123900 Theobroma cacao HOM05D006513 ORTHO05D008150 1.7e-81 306.2 188 76.6
TWI63G1281 Tripterygium wilfordii HOM05D006513 ORTHO05D008150 3.8e-81 305.1 192 77.6
Gohir.A07G035100 Gossypium hirsutum HOM05D006513 ORTHO05D008150 6.5e-81 304.3 188 78.2
Gohir.D07G039100 Gossypium hirsutum HOM05D006513 ORTHO05D008150 8.5e-81 303.9 188 78.2
Ciclev10009612m.g Citrus clementina HOM05D006513 ORTHO05D008150 4.2e-80 301.6 189 78.8
CARHR192710 Cardamine hirsuta HOM05D006513 ORTHO05D008150 1.2e-79 300.1 189 75.1
Haze_25608 Corylus avellana HOM05D006513 ORTHO05D008150 6.1e-79 297.7 182 77.5
AL6G31670 Arabidopsis lyrata HOM05D006513 ORTHO05D008150 1.8e-78 296.2 189 74.1
Carub.0006s1850 Capsella rubella HOM05D006513 ORTHO05D008150 4.0e-78 295.0 189 74.6
Duzib187G1241 Durio zibethinus HOM05D006513 ORTHO05D008150 4.0e-78 295.0 188 73.9
Cc06_g08720 Coffea canephora HOM05D006513 ORTHO05D008150 1.5e-77 293.1 188 72.3
Eucgr.C04187 Eucalyptus grandis HOM05D006513 ORTHO05D008150 1.5e-77 293.1 189 75.1
Sp6g24280 Schrenkiella parvula HOM05D006513 ORTHO05D008150 1.5e-77 293.1 189 73.0
Gohir.A08G239200 Gossypium hirsutum HOM05D006513 ORTHO05D008150 2.0e-77 292.7 188 73.4
AT5G20120 Arabidopsis thaliana HOM05D006513 ORTHO05D008150 2.6e-77 292.4 189 73.0
Hma1.2p1_0665F.1_g199090 Hydrangea macrophylla HOM05D006513 ORTHO05D008150 2.6e-77 292.4 188 75.0
Thhalv10014769m.g Eutrema salsugineum HOM05D006513 ORTHO05D008150 4.4e-77 291.6 189 73.5
Sed0011750 Sechium edule HOM05D006513 ORTHO05D008150 4.4e-77 291.6 188 72.9
BcaC03g13734 Brassica carinata HOM05D006513 ORTHO05D008150 9.7e-77 290.4 189 72.0
Prupe.7G240600 Prunus persica HOM05D006513 ORTHO05D008150 1.3e-76 290.0 187 76.5
Dinv41526 Davidia involucrata HOM05D006513 ORTHO05D008150 1.7e-76 289.7 187 72.2
BolC2t07016H Brassica oleracea HOM05D006513 ORTHO05D008150 2.8e-76 288.9 189 71.4
PGR102G1904 Punica granatum HOM05D006513 ORTHO05D008150 4.8e-76 288.1 189 74.6
A02p06050 Brassica napus HOM05D006513 ORTHO05D008150 6.3e-76 287.7 189 71.4
BraA02t05556Z Brassica rapa HOM05D006513 ORTHO05D008150 6.3e-76 287.7 189 71.4
BcaB05g22870 Brassica carinata HOM05D006513 ORTHO05D008150 8.2e-76 287.3 189 71.4
Actinidia26398 Actinidia chinensis HOM05D006513 ORTHO05D008150 3.1e-75 285.4 188 71.8
THA.LOC104799645 Tarenaya hassleriana HOM05D006513 ORTHO05D008150 7.0e-75 284.3 189 71.4
GSVIVG01015511001 Vitis vinifera HOM05D006513 ORTHO05D008150 9.1e-75 283.9 188 72.3
Aa31LG1G14240 Aethionema arabicum HOM05D006513 ORTHO05D008150 1.6e-74 283.1 189 69.3
Gorai.004G277700 Gossypium raimondii HOM05D006513 ORTHO05D008150 5.9e-74 281.2 222 63.5
Duzib150G1190 Durio zibethinus HOM05D006513 ORTHO05D008150 1.0e-73 280.4 184 72.8
BNapus_Darmor_BZH_scaffold_38p01790 Brassica napus HOM05D006513 ORTHO05D008150 1.5e-72 276.6 195 68.7
Lj4g0014130 Lotus japonicus HOM05D006513 ORTHO05D008150 1.5e-72 276.6 194 67.5
TPR.G10698 Trifolium pratense HOM05D006513 ORTHO05D008150 2.5e-72 275.8 194 68.0
arahy.Tifrunner.gnm1.ann1.7JIW3E Arachis hypogaea HOM05D006513 ORTHO05D008150 5.5e-72 274.6 195 68.7
MD02G1034700 Malus domestica HOM05D006513 ORTHO05D008150 6.1e-71 271.2 187 72.7
QL02p087926 Quercus lobata HOM05D006513 ORTHO05D008150 6.8e-70 267.7 250 57.2
Sed0002363 Sechium edule HOM05D006513 ORTHO05D008150 6.8e-70 267.7 189 70.4
ECA240G2511 Erigeron canadensis HOM05D006513 ORTHO05D008150 8.8e-70 267.3 189 68.8
HanXRQChr09g0242331 Helianthus annuus HOM05D006513 ORTHO05D008150 2.6e-69 265.8 190 67.9
THA.LOC104811035 Tarenaya hassleriana HOM05D006513 ORTHO05D008150 3.4e-69 265.4 188 68.1
Lsat_1_v5_gn_7_45681 Lactuca sativa HOM05D006513 ORTHO05D008150 4.4e-69 265.0 183 69.9
CSS0037158 Camellia sinensis var. sinensis HOM05D006513 ORTHO05D008150 7.5e-69 264.2 191 66.5
CANSAT11G2038 Cannabis sativa HOM05D006513 ORTHO05D008150 1.7e-68 263.1 188 68.6
Glyma.17G115800 Glycine max HOM05D006513 ORTHO05D008150 2.2e-68 262.7 195 67.7
Psat4g039440 Pisum sativum HOM05D006513 ORTHO05D008150 2.2e-68 262.7 195 65.1
Glyma.13G168100 Glycine max HOM05D006513 ORTHO05D008150 3.7e-68 261.9 195 67.7
Nn2g12003 Nelumbo nucifera HOM05D006513 ORTHO05D008150 4.8e-68 261.5 188 69.7
PSO455G0031 Papaver somniferum HOM05D006513 ORTHO05D008150 4.8e-68 261.5 190 70.0
Phvul.003G163500 Phaseolus vulgaris HOM05D006513 ORTHO05D008150 6.3e-68 261.2 195 67.2
RcHm_v2.0_Chr2g0089051 Rosa chinensis HOM05D006513 ORTHO05D008150 1.4e-67 260.0 187 71.7
Ah.09g225970 Amaranthus hybridus HOM05D006513 ORTHO05D008150 4.1e-67 258.5 185 67.0
Medtr4g114105 Medicago truncatula HOM05D006513 ORTHO05D008150 1.6e-66 256.5 183 67.2
PSO170G2269 Papaver somniferum HOM05D006513 ORTHO05D008150 1.6e-66 256.5 190 68.4
FvH4_1g03550 Fragaria vesca HOM05D006513 ORTHO05D008150 2.0e-66 256.1 187 69.0
FAN19G1517 Fragaria x ananassa HOM05D006513 ORTHO05D008150 2.0e-66 256.1 187 69.0
FAN28G2022 Fragaria x ananassa HOM05D006513 ORTHO05D008150 5.9e-66 254.6 187 68.4
FAN26G1752 Fragaria x ananassa HOM05D006513 ORTHO05D008150 7.7e-66 254.2 187 68.4
Hma1.2p1_3730F.1_g337400 Hydrangea macrophylla HOM05D006513 ORTHO05D008150 7.7e-66 254.2 191 67.0
Nitab4.5_0007523g0020 Nicotiana tabacum HOM05D006513 ORTHO05D008150 1.0e-65 253.8 191 67.5
Peaxi162Scf00984g00021 Petunia axillaris HOM05D006513 ORTHO05D008150 1.3e-65 253.4 189 66.1
Sc08g0006720 Simmondsia chinensis HOM05D006513 ORTHO05D008150 2.3e-65 252.7 189 64.6
Nitab4.5_0002556g0080 Nicotiana tabacum HOM05D006513 ORTHO05D008150 3.8e-65 251.9 191 66.5
EL10Ac8g18628 Beta vulgaris HOM05D006513 ORTHO05D008150 5.0e-65 251.5 185 65.4
Aqoxy7G02130 Aquilegia oxysepala HOM05D006513 ORTHO05D008150 6.5e-65 251.1 190 68.4
AUR62033489 Chenopodium quinoa HOM05D006513 ORTHO05D008150 6.5e-65 251.1 190 65.3
MD15G1175500 Malus domestica HOM05D006513 ORTHO05D008150 6.5e-65 251.1 187 70.6
Rhsim03G0247400 Rhododendron simsii HOM05D006513 ORTHO05D008150 1.1e-64 250.4 191 65.4
vmacro06122 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 1.1e-64 250.4 189 65.6
vmacro06182 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 1.1e-64 250.4 189 65.6
Actinidia07430 Actinidia chinensis HOM05D006513 ORTHO05D008150 1.9e-64 249.6 190 65.3
Solyc12g006660.2 Solanum lycopersicum HOM05D006513 ORTHO05D008150 1.9e-64 249.6 189 65.6
Sopen12g002610 Solanum pennellii HOM05D006513 ORTHO05D008150 2.5e-64 249.2 189 65.1
Lalb_Chr13g0301941 Lupinus albus HOM05D006513 ORTHO05D008150 9.5e-64 247.3 200 66.0
PGSC0003DMG401020668 Solanum tuberosum HOM05D006513 ORTHO05D008150 8.0e-63 244.2 189 64.6
CAN.G377.11 Capsicum annuum HOM05D006513 ORTHO05D008150 4.0e-62 241.9 189 62.4
Lalb_Chr12g0197841 Lupinus albus HOM05D006513 ORTHO05D008150 4.0e-62 241.9 200 63.0
TAR625G1184 Trochodendron aralioides HOM05D006513 ORTHO05D008150 6.8e-62 241.1 159 74.2
CsaV3_1G029880 Cucumis sativus L. HOM05D006513 ORTHO05D008150 1.5e-61 240.0 147 74.1
Oeu021588.1 Olea europaea HOM05D006513 ORTHO05D008150 9.8e-61 237.3 159 73.0
HanXRQChr03g0062541 Helianthus annuus HOM05D006513 ORTHO05D008150 1.3e-60 236.9 189 63.0
MELO3C010361.2 Cucumis melo HOM05D006513 ORTHO05D008150 3.7e-60 235.3 141 75.9
Nn8g39411 Nelumbo nucifera HOM05D006513 ORTHO05D008150 6.3e-60 234.6 188 62.8
Duzib168G2120 Durio zibethinus HOM05D006513 ORTHO05D008150 2.0e-58 229.6 150 72.7
AUR62011112 Chenopodium quinoa HOM05D000667 ORTHO05D002614 7.8e-58 227.6 160 68.8
TAR626G1980 Trochodendron aralioides HOM05D006513 ORTHO05D008150 3.0e-54 215.7 140 74.3
arahy.Tifrunner.gnm1.ann1.PME717 Arachis hypogaea HOM05D006513 ORTHO05D008150 2.0e-53 213.0 190 58.9
Ca_21690_v3 Cicer arietinum L. HOM05D006513 ORTHO05D008150 2.0e-53 213.0 156 63.5
MBI01_g37808_MAGBIO Magnolia biondii HOM05D006513 ORTHO05D008150 3.4e-53 212.2 188 59.0
ClCG06G010970 Citrullus lanatus HOM05D006513 ORTHO05D008150 3.7e-52 208.8 160 63.1
Lj7A631T29 Lonicera japonica HOM05D006513 ORTHO05D008150 7.0e-51 204.5 144 68.8
Hund26496 Selenicereus undatus HOM05D006513 ORTHO05D008150 1.3e-44 183.7 133 63.2
HPP92_002794 Vanilla planifolia HOM05D006513 ORTHO05D008150 1.8e-38 163.3 190 47.4
Gohir.D08G259900 Gossypium hirsutum HOM05D006513 ORTHO05D008150 1.7e-36 156.8 103 73.8
VMungo1215G0117 Vigna mungo HOM05D006513 ORTHO05D008150 8.3e-36 154.5 190 47.9
COL.COLO4_05780 Corchorus olitorius HOM05D006513 ORTHO05D008150 7.1e-35 151.4 86 75.6
SEGI_29438 Sequoiadendron giganteum HOM05D006513 ORTHO05D008150 1.2e-34 150.6 191 45.0
ATR1156G011 Amborella trichopoda HOM05D006513 ORTHO05D008150 2.3e-33 146.4 180 46.7
Duzib150G1040 Durio zibethinus HOM05D006513 ORTHO05D008150 3.6e-31 139.0 98 67.3
Pp3c5_25700 Physcomitrium patens HOM05D006513 ORTHO05D008150 5.2e-30 135.2 163 44.8
Mapoly0015s0101 Marchantia polymorpha HOM05D006513 ORTHO05D008150 1.9e-27 126.7 161 40.4
Nitab4.5_0017656g0020 Nicotiana tabacum HOM05D006513 ORTHO05D008150 1.2e-26 124.0 96 63.5
Nitab4.5_0010819g0020 Nicotiana tabacum HOM05D005868 ORTHO05D006964 1.3e-25 120.6 89 69.7
CBR_g6525 Chara braunii HOM05D006513 ORTHO05D008150 4.7e-23 112.1 148 39.9
AagrBONN_evm.TU.Sc2ySwM_340.153 Anthoceros agrestis HOM05D006513 ORTHO05D008150 1.5e-21 107.1 163 35.6
TAR636G0633 Trochodendron aralioides HOM05D005966 ORTHO05D007584 1.5e-21 107.1 86 62.8
TAR090G0005 Trochodendron aralioides HOM05D006513 ORTHO05D008150 3.8e-20 102.4 65 73.8
Rhsim02G0222800 Rhododendron simsii HOM05D006513 ORTHO05D008150 7.1e-19 98.2 75 61.3
Pp3c25_13070 Physcomitrium patens HOM05D006513 ORTHO05D008150 1.3e-12 77.4 95 35.8
HPP92_027747 Vanilla planifolia HOM05D006513 ORTHO05D008150 9.3e-11 71.2 100 43.0
AUR62043674 Chenopodium quinoa HOM05D006513 ORTHO05D003876 2.3e-09 66.6 46 69.6
Cpa.g.sc75.50 Carica papaya HOM05D006513 ORTHO05D008150 2.8e-07 59.7 48 64.6
RcHm_v2.0_Chr7g0212941 Rosa chinensis HOM05D006513 ORTHO05D008150 1.8e-06 57.0 44 68.2
vmacro22116 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 2.4e-06 56.6 41 61.0


User provided reference genes

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