Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.14G129700 Manihot esculenta HOM05D007077 ORTHO05D008853 3.3e-52 208.0 97 100.0
Manes.06G053400 Manihot esculenta HOM05D007077 ORTHO05D008853 1.5e-33 146.0 91 72.5
Sabra03G0099300 Salix brachista HOM05D007077 ORTHO05D008853 1.9e-31 139.0 91 67.0
Potri.003G137900 Populus trichocarpa HOM05D007077 ORTHO05D008853 4.6e-30 134.4 91 65.9
TWI63G0911 Tripterygium wilfordii HOM05D007077 ORTHO05D008853 7.4e-28 127.1 92 60.9
Atru.chr7.1226 Acer truncatum HOM05D007077 ORTHO05D008853 1.6e-27 125.9 91 60.4
A07p29070 Brassica napus HOM05D007077 ORTHO05D008853 1.6e-27 125.9 89 60.7
BcaB02g06994 Brassica carinata HOM05D007077 ORTHO05D008853 2.1e-27 125.6 89 59.6
C06p32830 Brassica napus HOM05D007077 ORTHO05D008853 2.1e-27 125.6 89 59.6
Gohir.D05G019400 Gossypium hirsutum HOM05D007077 ORTHO05D008853 2.1e-27 125.6 89 61.8
Gorai.009G019800 Gossypium raimondii HOM05D007077 ORTHO05D008853 2.1e-27 125.6 89 61.8
Gohir.A05G018500 Gossypium hirsutum HOM05D007077 ORTHO05D008853 6.2e-27 124.0 89 60.7
BolC6t38404H Brassica oleracea HOM05D007077 ORTHO05D008853 1.1e-26 123.2 89 58.4
RcHm_v2.0_Chr2g0089201 Rosa chinensis HOM05D007077 ORTHO05D008853 1.1e-26 123.2 92 55.4
CiPaw.03G240800 Carya illinoinensis HOM05D007077 ORTHO05D008853 1.4e-26 122.9 91 59.3
Duzib150G1251 Durio zibethinus HOM05D007077 ORTHO05D008853 1.8e-26 122.5 92 55.4
FAN23G2971 Fragaria x ananassa HOM05D007077 ORTHO05D008853 1.8e-26 122.5 91 58.2
FAN26G2340 Fragaria x ananassa HOM05D007077 ORTHO05D008853 1.8e-26 122.5 91 58.2
Cpa.g.sc75.76 Carica papaya HOM05D007077 ORTHO05D008853 2.4e-26 122.1 91 56.0
FvH4_1g03790 Fragaria vesca HOM05D007077 ORTHO05D008853 4.0e-26 121.3 91 57.1
FAN19G1922 Fragaria x ananassa HOM05D007077 ORTHO05D008853 4.0e-26 121.3 91 57.1
Thecc.09G122000 Theobroma cacao HOM05D007077 ORTHO05D008853 4.0e-26 121.3 92 54.3
Eucgr.C04175 Eucalyptus grandis HOM05D007077 ORTHO05D008853 5.3e-26 120.9 92 55.4
MD02G1036500 Malus domestica HOM05D007077 ORTHO05D008853 5.3e-26 120.9 91 58.2
Prupe.7G238900 Prunus persica HOM05D007077 ORTHO05D008853 6.9e-26 120.6 89 59.6
Duzib168G0686 Durio zibethinus HOM05D007077 ORTHO05D008853 1.2e-25 119.8 92 54.3
BraA07t30546Z Brassica rapa HOM05D007077 ORTHO05D008853 2.0e-25 119.0 89 56.2
COL.COLO4_35188 Corchorus olitorius HOM05D007077 ORTHO05D008853 4.5e-25 117.9 89 57.3
GSVIVG01035379001 Vitis vinifera HOM05D007077 ORTHO05D008853 4.5e-25 117.9 88 55.7
QL02p087620 Quercus lobata HOM05D007077 ORTHO05D008853 5.8e-25 117.5 88 55.7
arahy.Tifrunner.gnm1.ann1.7ZPA8Y Arachis hypogaea HOM05D007077 ORTHO05D008853 9.9e-25 116.7 91 54.9
arahy.Tifrunner.gnm1.ann1.BTXG8Q Arachis hypogaea HOM05D007077 ORTHO05D008853 9.9e-25 116.7 91 54.9
COL.COLO4_05999 Corchorus olitorius HOM05D007077 ORTHO05D008853 9.9e-25 116.7 91 56.0
Carub.0002s2191 Capsella rubella HOM05D007077 ORTHO05D008853 1.3e-24 116.3 91 54.9
Actinidia07437 Actinidia chinensis HOM05D007077 ORTHO05D008853 1.7e-24 115.9 91 53.8
Sp5g30250 Schrenkiella parvula HOM05D007077 ORTHO05D008853 1.7e-24 115.9 91 53.8
THA.LOC104826537 Tarenaya hassleriana HOM05D007077 ORTHO05D008853 2.9e-24 115.2 89 57.3
BcaB05g24885 Brassica carinata HOM05D007077 ORTHO05D008853 4.9e-24 114.4 88 53.4
AT1G75125 Arabidopsis thaliana HOM05D007077 ORTHO05D008853 6.4e-24 114.0 89 53.9
Lj4g0023379 Lotus japonicus HOM05D007077 ORTHO05D008853 6.4e-24 114.0 91 54.9
TAR636G1135 Trochodendron aralioides HOM05D007077 ORTHO05D008853 8.4e-24 113.6 88 55.7
MBI04_g10421_MAGBIO Magnolia biondii HOM05D007077 ORTHO05D008853 1.1e-23 113.2 88 55.7
Medtr4g113750 Medicago truncatula HOM05D007077 ORTHO05D008853 1.1e-23 113.2 89 52.8
Dinv36561 Davidia involucrata HOM05D007077 ORTHO05D008853 1.4e-23 112.8 88 55.7
TPR.G10683 Trifolium pratense HOM05D007077 ORTHO05D008853 1.9e-23 112.5 91 52.7
Thhalv10019349m.g Eutrema salsugineum HOM05D007077 ORTHO05D008853 2.4e-23 112.1 91 51.6
Glyma.17G117400 Glycine max HOM05D007077 ORTHO05D008853 4.2e-23 111.3 91 52.7
Phvul.003G162000 Phaseolus vulgaris HOM05D007077 ORTHO05D008853 4.2e-23 111.3 91 52.7
vmacro06174 Vaccinium macrocarpon HOM05D007077 ORTHO05D008853 4.2e-23 111.3 91 52.7
CSS0033721 Camellia sinensis var. sinensis HOM05D007077 ORTHO05D008853 5.5e-23 110.9 91 53.8
CSS0046716 Camellia sinensis var. sinensis HOM05D007077 ORTHO05D008853 5.5e-23 110.9 91 52.7
CDE06G0710 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 5.5e-23 110.9 91 51.6
AL2G35020 Arabidopsis lyrata HOM05D007077 ORTHO05D008853 7.1e-23 110.5 89 52.8
Glyma.05G009400 Glycine max HOM05D007077 ORTHO05D008853 7.1e-23 110.5 91 51.6
Phvul.003G161700 Phaseolus vulgaris HOM05D007077 ORTHO05D008853 7.1e-23 110.5 91 51.6
Sed0015086 Sechium edule HOM05D007077 ORTHO05D008853 7.1e-23 110.5 91 53.8
CARHR068440 Cardamine hirsuta HOM05D007077 ORTHO05D008853 9.3e-23 110.2 91 51.6
BcaB02g07008 Brassica carinata HOM05D007077 ORTHO05D008853 1.6e-22 109.4 90 52.2
Lalb_Chr07g0178761 Lupinus albus HOM05D007077 ORTHO05D008853 1.6e-22 109.4 91 52.7
Psat4g041880 Pisum sativum HOM05D007077 ORTHO05D008853 1.6e-22 109.4 89 52.8
Aa31LG4G5320 Aethionema arabicum HOM05D007077 ORTHO05D008853 2.1e-22 109.0 90 53.3
CsaV3_2G002680 Cucumis sativus L. HOM05D007077 ORTHO05D008853 3.5e-22 108.2 91 53.8
VMungo1215G0506 Vigna mungo HOM05D007077 ORTHO05D008853 3.5e-22 108.2 91 50.5
Os01g0612800 Oryza sativa ssp. japonica HOM05D007077 ORTHO05D008853 1.3e-21 106.3 88 54.5
A02p19700 Brassica napus HOM05D007077 ORTHO05D008853 1.8e-21 105.9 93 46.2
BraA02t07006Z Brassica rapa HOM05D007077 ORTHO05D008853 1.8e-21 105.9 93 46.2
CARHR068450 Cardamine hirsuta HOM05D007077 ORTHO05D008853 1.1e-20 103.2 91 50.5
CDE07G1647 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 1.1e-20 103.2 86 48.8
Mapoly0015s0040 Marchantia polymorpha HOM05D007077 ORTHO05D008853 1.5e-20 102.8 88 51.1
PGR102G1835 Punica granatum HOM05D007077 ORTHO05D008853 2.5e-20 102.1 69 59.4
AagrBONN_evm.TU.Sc2ySwM_368.923 Anthoceros agrestis HOM05D007077 ORTHO05D008853 4.3e-20 101.3 91 44.0
Actinidia26405 Actinidia chinensis HOM05D007077 ORTHO05D008853 5.6e-20 100.9 86 50.0
Pp3c10_2110 Physcomitrium patens HOM05D007077 ORTHO05D008853 5.6e-20 100.9 87 48.3
Rhsim03G0246400 Rhododendron simsii HOM05D007077 ORTHO05D008853 5.6e-20 100.9 91 48.4
SMO137G0334 Selaginella moellendorffii HOM05D007077 ORTHO05D008853 9.6e-20 100.1 89 43.8
QL02p031889 Quercus lobata HOM05D007077 ORTHO05D008853 1.6e-19 99.4 76 55.3
QL93p2004_0148 Quercus lobata HOM05D007077 ORTHO05D008853 1.6e-19 99.4 76 55.3
ClCG11G002840 Citrullus lanatus HOM05D007077 ORTHO05D008853 2.1e-19 99.0 110 46.4
Hma1.2p1_0665F.1_g199210 Hydrangea macrophylla HOM05D007077 ORTHO05D008853 2.8e-19 98.6 63 63.5
BcaC03g15541 Brassica carinata HOM05D007077 ORTHO05D008853 3.7e-19 98.2 89 47.2
BolC2t09261H Brassica oleracea HOM05D007077 ORTHO05D008853 3.7e-19 98.2 89 47.2
CDE07G0486 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 3.7e-19 98.2 75 53.3
Haze_25634 Corylus avellana HOM05D007077 ORTHO05D008853 3.7e-19 98.2 95 49.5
Ciclev10010021m.g Citrus clementina HOM05D007077 ORTHO05D008853 6.2e-19 97.4 80 51.2
QL05p072824 Quercus lobata HOM05D003311 ORTHO05D008853 1.1e-18 96.7 75 57.3
SalBow6G6978 Salvia bowleyana HOM05D007077 ORTHO05D008853 9.0e-18 93.6 89 52.8
Ah.05g167190 Amaranthus hybridus HOM05D007077 ORTHO05D008853 2.6e-17 92.0 89 51.7
SGA_v2.0_scaffold51G18726 Striga asiatica HOM05D007077 ORTHO05D008853 5.8e-17 90.9 91 49.5
Nitab4.5_0000167g0170 Nicotiana tabacum HOM05D007077 ORTHO05D008853 1.0e-16 90.1 90 47.8
Peaxi162Scf01013g00228 Petunia axillaris HOM05D007077 ORTHO05D008853 3.8e-16 88.2 90 46.7
CAN.G307.7 Capsicum annuum HOM05D007077 ORTHO05D008853 8.4e-16 87.0 90 46.7
Sed0025696 Sechium edule HOM05D007077 ORTHO05D008853 8.4e-16 87.0 80 50.0
Sopen03g004510 Solanum pennellii HOM05D007077 ORTHO05D008853 3.2e-15 85.1 90 45.6
Cc09_g03400 Coffea canephora HOM05D007077 ORTHO05D008853 4.2e-15 84.7 58 62.1
Migut.K00414 Erythranthe guttata HOM05D007077 ORTHO05D008853 4.2e-15 84.7 88 50.0
Oeu055966.1 Olea europaea HOM05D007077 ORTHO05D008853 1.2e-14 83.2 90 46.7
Solyc03g025690.4 Solanum lycopersicum HOM05D007077 ORTHO05D008853 1.6e-14 82.8 90 43.3
Hund09149 Selenicereus undatus HOM05D007077 ORTHO05D008853 3.5e-14 81.6 84 42.9
EL10Ac8g18603 Beta vulgaris HOM05D007077 ORTHO05D008853 1.3e-13 79.7 73 50.7
MSTRG.10653 Avicennia marina HOM05D007077 ORTHO05D008853 1.8e-13 79.3 87 46.0
HanXRQChr01g0017151 Helianthus annuus HOM05D007077 ORTHO05D008853 2.5e-12 75.5 95 37.9
GSVIVG01015495001 Vitis vinifera HOM05D007077 ORTHO05D008853 7.4e-12 73.9 50 56.0
HanXRQChr12g0356451 Helianthus annuus HOM05D007077 ORTHO05D008853 1.3e-11 73.2 101 35.6
MELO3C031577.2 Cucumis melo HOM05D007077 ORTHO05D008853 2.8e-11 72.0 85 41.2
Lsat_1_v5_gn_5_98981 Lactuca sativa HOM05D007077 ORTHO05D008853 4.8e-11 71.2 88 38.6
Nitab4.5_0001579g0110 Nicotiana tabacum HOM05D007077 ORTHO05D008853 2.0e-09 65.9 45 57.8
PGSC0003DMG400014298 Solanum tuberosum HOM05D007077 ORTHO05D008853 1.0e-08 63.5 78 41.0
C02p32320 Brassica napus HOM05D007077 ORTHO05D008853 8.5e-08 60.5 54 46.3


User provided reference genes

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