Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.14G127800 Manihot esculenta HOM05D008081 ORTHO05D010223 3.8e-232 807.7 395 100.0
Hma1.2p1_0018F.1_g012950 Hydrangea macrophylla HOM05D008081 ORTHO05D010223 1.4e-138 496.9 391 60.9
Potri.018G071900 Populus trichocarpa HOM05D008081 ORTHO05D010223 9.3e-138 494.2 396 62.1
Sabra18G0062600 Salix brachista HOM05D008081 ORTHO05D010223 3.7e-134 482.3 394 59.4
DCAR_009223 Daucus carota HOM05D008081 ORTHO05D010223 4.8e-134 481.9 399 57.9
QL02p086958 Quercus lobata HOM05D008081 ORTHO05D010223 6.3e-134 481.5 399 59.9
Cc06_g09100 Coffea canephora HOM05D008081 ORTHO05D010223 1.2e-132 477.2 405 57.8
Ciclev10008639m.g Citrus clementina HOM05D008081 ORTHO05D010223 1.0e-131 474.2 397 59.2
COL.COLO4_34977 Corchorus olitorius HOM05D008081 ORTHO05D010223 1.0e-131 474.2 396 59.6
CANSAT56G1336 Cannabis sativa HOM05D008081 ORTHO05D010223 3.2e-130 469.2 389 57.8
Atru.chr7.1264 Acer truncatum HOM05D008081 ORTHO05D010223 3.6e-129 465.7 407 57.7
Duzib168G0460 Durio zibethinus HOM05D008081 ORTHO05D010223 6.1e-129 464.9 390 58.5
Thecc.09G118700 Theobroma cacao HOM05D008081 ORTHO05D010223 3.9e-128 462.2 396 57.3
Lsat_1_v5_gn_5_98420 Lactuca sativa HOM05D008081 ORTHO05D010223 1.9e-127 459.9 400 56.8
Medtr2g055250 Medicago truncatula HOM05D008081 ORTHO05D010223 9.7e-127 457.6 402 57.7
Lj1g0011101 Lotus japonicus HOM05D008081 ORTHO05D010223 1.3e-126 457.2 412 57.8
Psat1g025520 Pisum sativum HOM05D008081 ORTHO05D010223 1.3e-126 457.2 393 59.0
PGR142G1327 Punica granatum HOM05D008081 ORTHO05D010223 4.8e-126 455.3 389 56.6
Ca_02616_v3 Cicer arietinum L. HOM05D008081 ORTHO05D010223 8.2e-126 454.5 401 58.1
Nitab4.5_0000282g0020 Nicotiana tabacum HOM05D008081 ORTHO05D010223 7.7e-124 448.0 398 53.8
ECA234G2703 Erigeron canadensis HOM05D008081 ORTHO05D010223 1.0e-123 447.6 402 54.2
Glyma.06G213000 Glycine max HOM05D008081 ORTHO05D010223 3.8e-123 445.7 409 56.0
HanXRQChr10g0316871 Helianthus annuus HOM05D008081 ORTHO05D010223 3.8e-123 445.7 401 55.9
VMungo1309G1591 Vigna mungo HOM05D008081 ORTHO05D010223 1.1e-122 444.1 405 57.0
Phvul.009G199400 Phaseolus vulgaris HOM05D008081 ORTHO05D010223 1.9e-122 443.4 395 57.7
Glyma.04G150400 Glycine max HOM05D008081 ORTHO05D010223 7.2e-122 441.4 402 57.2
Eucgr.L02382 Eucalyptus grandis HOM05D008081 ORTHO05D010223 6.1e-121 438.3 397 55.7
Gorai.010G066900 Gossypium raimondii HOM05D008081 ORTHO05D010223 2.0e-119 433.3 390 58.2
Nn2g11886 Nelumbo nucifera HOM05D008081 ORTHO05D010223 3.3e-119 432.6 398 56.0
MBI04_g33811_MAGBIO Magnolia biondii HOM05D008081 ORTHO05D010223 1.3e-118 430.6 390 56.2
Gohir.A06G059000 Gossypium hirsutum HOM05D008081 ORTHO05D010223 1.7e-118 430.3 390 58.2
Gohir.D06G057200 Gossypium hirsutum HOM05D008081 ORTHO05D010223 8.2e-118 427.9 390 57.7
Lalb_Chr01g0020971 Lupinus albus HOM05D008081 ORTHO05D010223 1.8e-117 426.8 394 55.6
GSVIVG01015465001 Vitis vinifera HOM05D008081 ORTHO05D010223 1.3e-115 420.6 388 54.4
Aqoxy7G01970 Aquilegia oxysepala HOM05D008081 ORTHO05D010223 2.2e-115 419.9 398 54.3
CSS0008637 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 3.2e-114 416.0 320 62.2
TWI34G1060 Tripterygium wilfordii HOM05D008081 ORTHO05D010223 2.1e-113 413.3 400 52.2
PSO765G0202 Papaver somniferum HOM05D008081 ORTHO05D010223 2.7e-113 412.9 401 53.1
Cpa.g.sc75.87 Carica papaya HOM05D008081 ORTHO05D010223 6.1e-113 411.8 368 56.2
CSS0001106 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 1.4e-112 410.6 320 61.2
PSO349G0241 Papaver somniferum HOM05D008081 ORTHO05D010223 1.7e-110 403.7 404 51.7
TAR383G0366 Trochodendron aralioides HOM05D008081 ORTHO05D010223 1.7e-107 393.7 391 52.4
Nitab4.5_0003085g0020 Nicotiana tabacum HOM05D008081 ORTHO05D010223 6.5e-107 391.7 363 52.1
Actinidia09389 Actinidia chinensis HOM05D008081 ORTHO05D010223 8.5e-107 391.3 389 51.9
CSS0031360 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 5.5e-106 388.7 320 59.4
PGSC0003DMG400015624 Solanum tuberosum HOM05D008081 ORTHO05D010223 5.5e-106 388.7 396 47.0
Sopen08g011800 Solanum pennellii HOM05D008081 ORTHO05D010223 9.4e-106 387.9 400 46.8
Oeu032197.1 Olea europaea HOM05D008081 ORTHO05D010223 2.1e-105 386.7 401 50.1
Solyc08g041700.1 Solanum lycopersicum HOM05D008081 ORTHO05D010223 2.7e-105 386.3 400 46.5
Eucgr.C01103 Eucalyptus grandis HOM05D008081 ORTHO05D010223 3.4e-95 352.8 325 54.2
Dinv36582 Davidia involucrata HOM05D008081 ORTHO05D010223 1.4e-93 347.4 307 58.0
Carub.0006s1834 Capsella rubella HOM05D008081 ORTHO05D010223 9.1e-93 344.7 393 46.1
Thhalv10013658m.g Eutrema salsugineum HOM05D008081 ORTHO05D010223 3.5e-92 342.8 393 46.8
AT5G19970 Arabidopsis thaliana HOM05D008081 ORTHO05D010223 1.0e-91 341.3 392 45.9
BolC2t06998H Brassica oleracea HOM05D008081 ORTHO05D010223 5.0e-91 339.0 392 46.4
BNapus_Darmor_BZH_scaffold_38p01920 Brassica napus HOM05D008081 ORTHO05D010223 1.9e-90 337.0 392 46.2
Sp6g24410 Schrenkiella parvula HOM05D008081 ORTHO05D010223 1.9e-90 337.0 394 44.9
A02p05940 Brassica napus HOM05D008081 ORTHO05D010223 7.2e-90 335.1 392 44.4
BraA02t05546Z Brassica rapa HOM05D008081 ORTHO05D010223 7.2e-90 335.1 392 44.4
Zm00001eb158500 Zea mays HOM05D008081 ORTHO05D010223 2.0e-87 327.0 397 44.1
Os01g0647000 Oryza sativa ssp. japonica HOM05D008081 ORTHO05D010223 1.7e-86 323.9 390 44.9
Peaxi162Scf00292g00051 Petunia axillaris HOM05D008081 ORTHO05D010223 1.8e-85 320.5 301 51.5
CARHR192880 Cardamine hirsuta HOM05D008081 ORTHO05D010223 4.5e-84 315.8 367 45.8
CSS0020794 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 3.8e-83 312.8 380 44.7
AL6G31500 Arabidopsis lyrata HOM05D008081 ORTHO05D010223 5.0e-83 312.4 367 45.0
Thhalv10013905m.g Eutrema salsugineum HOM05D008081 ORTHO05D010223 1.8e-80 303.9 367 44.4
Aa31LG4G11630 Aethionema arabicum HOM05D008081 ORTHO05D010223 1.1e-77 294.7 354 43.8
THA.LOC104815107 Tarenaya hassleriana HOM05D008081 ORTHO05D010223 7.0e-77 292.0 399 42.1
ATR0083G076 Amborella trichopoda HOM05D008081 ORTHO05D010223 4.4e-71 272.7 387 39.0
TPR.G30892 Trifolium pratense HOM05D008081 ORTHO05D010223 6.2e-57 225.7 208 53.4
BcaB05g22890 Brassica carinata HOM05D008081 ORTHO05D010223 8.7e-43 178.7 242 39.3
BcaC03g13723 Brassica carinata HOM05D008081 ORTHO05D010223 6.2e-25 119.4 139 41.0


User provided reference genes

Program Settings