Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.14G123400 Manihot esculenta HOM05D005932 ORTHO05D006213 2.4e-72 275.4 142 100.0
Manes.06G068200 Manihot esculenta HOM05D005932 ORTHO05D006213 2.2e-41 172.6 141 64.5
Manes.05G115000 Manihot esculenta HOM05D005932 ORTHO05D006213 3.5e-34 148.7 142 58.5
Atru.chr10.845 Acer truncatum HOM05D005932 ORTHO05D006213 6.1e-31 137.9 128 60.9
Thecc.06G002100 Theobroma cacao HOM05D005932 ORTHO05D006213 4.8e-28 128.3 126 55.6
Gohir.A10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 4.1e-27 125.2 149 49.0
Duzib235G1239 Durio zibethinus HOM05D005932 ORTHO05D006213 5.3e-27 124.8 139 54.7
COL.COLO4_26835 Corchorus olitorius HOM05D005932 ORTHO05D006213 9.1e-27 124.0 138 51.4
Gohir.D10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 1.6e-26 123.2 149 50.3
Gorai.011G004600 Gossypium raimondii HOM05D005932 ORTHO05D006213 2.7e-26 122.5 149 49.7
Sabra11G0088800 Salix brachista HOM05D005932 ORTHO05D006213 6.5e-25 117.9 140 49.3
Potri.011G095000 Populus trichocarpa HOM05D005932 ORTHO05D006213 4.7e-23 111.7 142 45.8
CiPaw.09G141700 Carya illinoinensis HOM05D005932 ORTHO05D006213 6.1e-23 111.3 149 47.7
MD10G1253000 Malus domestica HOM05D005932 ORTHO05D006213 2.3e-22 109.4 127 47.2
CANSAT35G0096 Cannabis sativa HOM05D005932 ORTHO05D006213 2.6e-21 105.9 150 44.0
ClCG03G006250 Citrullus lanatus HOM05D005932 ORTHO05D006213 1.3e-20 103.6 141 46.8
Ca_17852_v3 Cicer arietinum L. HOM05D005932 ORTHO05D006213 2.2e-20 102.8 135 43.0
Prupe.4G090500 Prunus persica HOM05D005932 ORTHO05D006213 2.8e-20 102.4 131 46.6
MD05G1272900 Malus domestica HOM05D005932 ORTHO05D006213 6.3e-20 101.3 116 49.1
Gohir.D02G103800 Gossypium hirsutum HOM05D005932 ORTHO05D006213 8.3e-20 100.9 134 43.3
CiPaw.10G109100 Carya illinoinensis HOM05D005932 ORTHO05D006213 1.1e-19 100.5 147 43.5
TWI38G2281 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 1.1e-19 100.5 122 50.8
Glyma.05G166000 Glycine max HOM05D005932 ORTHO05D006213 2.4e-19 99.4 124 47.6
TPR.G6729 Trifolium pratense HOM05D005932 ORTHO05D006213 3.1e-19 99.0 130 45.4
Potri.001G371800 Populus trichocarpa HOM05D005932 ORTHO05D006213 4.1e-19 98.6 111 50.5
FvH4_3g10110 Fragaria vesca HOM05D005932 ORTHO05D006213 5.4e-19 98.2 140 44.3
VMungo0251G2717 Vigna mungo HOM05D005932 ORTHO05D006213 5.4e-19 98.2 125 48.0
FAN11G2171 Fragaria x ananassa HOM05D005932 ORTHO05D006213 7.0e-19 97.8 139 44.6
Sed0018131 Sechium edule HOM05D005932 ORTHO05D006213 7.0e-19 97.8 128 43.8
ClCG01G025150 Citrullus lanatus HOM05D005932 ORTHO05D006213 9.1e-19 97.4 127 44.9
Glyma.08G124100 Glycine max HOM05D005932 ORTHO05D006213 9.1e-19 97.4 126 45.2
TWI15G0856 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 9.1e-19 97.4 124 50.0
Gohir.A03G081000 Gossypium hirsutum HOM05D005932 ORTHO05D006213 1.2e-18 97.1 124 46.8
Gorai.005G117900 Gossypium raimondii HOM05D005932 ORTHO05D006213 2.0e-18 96.3 124 44.4
Lj4g0014090 Lotus japonicus HOM05D005932 ORTHO05D006213 2.0e-18 96.3 122 49.2
RcHm_v2.0_Chr5g0016051 Rosa chinensis HOM05D005932 ORTHO05D006213 2.7e-18 95.9 137 43.8
CSS0012768 Camellia sinensis var. sinensis HOM05D005932 ORTHO05D006213 3.5e-18 95.5 123 40.7
Cfa000817 Carpinus fangiana HOM05D005932 ORTHO05D006213 4.5e-18 95.1 125 47.2
Duzib192G0542 Durio zibethinus HOM05D005932 ORTHO05D006213 5.9e-18 94.7 106 47.2
FAN21G2441 Fragaria x ananassa HOM05D005932 ORTHO05D006213 5.9e-18 94.7 133 44.4
Sed0024512 Sechium edule HOM05D005932 ORTHO05D006213 5.9e-18 94.7 126 47.6
Medtr8g088330 Medicago truncatula HOM05D005932 ORTHO05D006213 7.7e-18 94.4 140 43.6
Hma1.2p1_0067F.1_g037010 Hydrangea macrophylla HOM05D005932 ORTHO05D006213 1.3e-17 93.6 133 43.6
Dinv10792 Davidia involucrata HOM05D005932 ORTHO05D006213 2.3e-17 92.8 121 52.1
Haze_05823 Corylus avellana HOM05D005932 ORTHO05D006213 5.0e-17 91.7 129 46.5
MELO3C007074.2 Cucumis melo HOM05D005932 ORTHO05D006213 5.0e-17 91.7 144 41.0
Eucgr.D00155 Eucalyptus grandis HOM05D005932 ORTHO05D006213 5.0e-17 91.7 139 41.7
Sed0022461 Sechium edule HOM05D005932 ORTHO05D006213 6.5e-17 91.3 140 43.6
Phvul.002G246500 Phaseolus vulgaris HOM05D005932 ORTHO05D006213 1.1e-16 90.5 133 45.1
CsaV3_1G037320 Cucumis sativus L. HOM05D005932 ORTHO05D006213 1.5e-16 90.1 126 46.0
TAR626G0301 Trochodendron aralioides HOM05D005932 ORTHO05D006213 9.5e-16 87.4 132 43.9
Psat7g064920 Pisum sativum HOM05D005932 ORTHO05D006213 1.2e-15 87.0 127 43.3
TWI63G1224 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 2.8e-15 85.9 101 51.5
Actinidia32363 Actinidia chinensis HOM05D005932 ORTHO05D006213 3.6e-15 85.5 114 42.1
MSTRG.16291 Avicennia marina HOM05D005932 ORTHO05D006213 4.7e-15 85.1 135 43.0
Lj1P1161T30 Lonicera japonica HOM05D005932 ORTHO05D006213 6.1e-15 84.7 114 46.5
MSTRG.13271 Avicennia marina HOM05D005932 ORTHO05D006213 8.0e-15 84.3 143 40.6
CsaV3_6G052360 Cucumis sativus L. HOM05D005932 ORTHO05D006213 1.4e-14 83.6 117 41.9
VMungo0540G1966 Vigna mungo HOM05D005932 ORTHO05D006213 5.2e-14 81.6 122 42.6
Sp7g19900 Schrenkiella parvula HOM05D005932 ORTHO05D006213 1.2e-13 80.5 120 42.5
Eucgr.D00169 Eucalyptus grandis HOM05D005932 ORTHO05D006213 4.4e-13 78.6 130 37.7
Lalb_Chr18g0057981 Lupinus albus HOM05D005932 ORTHO05D006213 5.7e-13 78.2 129 38.0
Actinidia31387 Actinidia chinensis HOM05D005932 ORTHO05D006213 9.8e-13 77.4 128 39.8
DCAR_003852 Daucus carota HOM05D005932 ORTHO05D006213 1.3e-12 77.0 134 39.6
Thhalv10009012m.g Eutrema salsugineum HOM05D012212 ORTHO05D006213 1.7e-12 76.6 138 41.3
Nn3g20198 Nelumbo nucifera HOM05D005932 ORTHO05D006213 1.7e-12 76.6 128 37.5
Dinv04757 Davidia involucrata HOM05D005932 ORTHO05D006213 2.2e-12 76.3 107 44.9
FAN16G0402 Fragaria x ananassa HOM05D005932 ORTHO05D006213 2.8e-12 75.9 133 40.6
Phvul.006G128300 Phaseolus vulgaris HOM05D005932 ORTHO05D006213 3.7e-12 75.5 121 38.8
Nitab4.5_0004734g0050 Nicotiana tabacum HOM05D005932 ORTHO05D006213 4.9e-12 75.1 128 40.6
Rhsim02G0161400 Rhododendron simsii HOM05D005932 ORTHO05D006213 4.9e-12 75.1 138 34.8
Sp1g26360 Schrenkiella parvula HOM05D012212 ORTHO05D006213 4.9e-12 75.1 136 40.4
THA.LOC104798624 Tarenaya hassleriana HOM05D012212 ORTHO05D006213 4.9e-12 75.1 132 38.6
BcaC06g30675 Brassica carinata HOM05D005932 ORTHO05D006213 1.1e-11 73.9 130 38.5
BcaNung00838 Brassica carinata HOM05D005932 ORTHO05D006213 1.1e-11 73.9 129 38.0
BcaNung00840 Brassica carinata HOM05D005932 ORTHO05D006213 1.1e-11 73.9 129 38.0
BolC7t45634H Brassica oleracea HOM05D005932 ORTHO05D006213 1.1e-11 73.9 129 38.0
Lj6g0008899 Lotus japonicus HOM05D005932 ORTHO05D006213 1.1e-11 73.9 116 40.5
C07p51350 Brassica napus HOM05D005932 ORTHO05D006213 1.4e-11 73.6 125 36.0
Lalb_Chr07g0185951 Lupinus albus HOM05D005932 ORTHO05D006213 1.8e-11 73.2 126 38.9
AL7G32200 Arabidopsis lyrata HOM05D005932 ORTHO05D006213 2.4e-11 72.8 135 38.5
A03p52900 Brassica napus HOM05D005932 ORTHO05D006213 2.4e-11 72.8 127 36.2
Cpa.g.sc166.34 Carica papaya HOM05D005932 ORTHO05D006213 2.4e-11 72.8 121 44.6
BraA03t14366Z Brassica rapa HOM05D005932 ORTHO05D006213 3.1e-11 72.4 128 36.7
THA.LOC104806292 Tarenaya hassleriana HOM05D001059 ORTHO05D000873 3.1e-11 72.4 139 38.8
CARHR228470 Cardamine hirsuta HOM05D005932 ORTHO05D006213 4.1e-11 72.0 126 36.5
PGR083G0615 Punica granatum HOM05D005932 ORTHO05D006213 5.4e-11 71.6 123 34.1
SalBow8G0055 Salvia bowleyana HOM05D005932 ORTHO05D006213 5.4e-11 71.6 131 39.7
SGA_v2.0_scaffold1G00270 Striga asiatica HOM05D005932 ORTHO05D006213 7.0e-11 71.2 154 36.4
SGA_v2.0_scaffold223G42865 Striga asiatica HOM05D005932 ORTHO05D006213 7.0e-11 71.2 133 38.3
AT4G21740 Arabidopsis thaliana HOM05D005932 ORTHO05D006213 1.2e-10 70.5 138 37.7
Solyc02g024010.1 Solanum lycopersicum HOM05D005932 ORTHO05D006213 1.6e-10 70.1 140 36.4
Psat1g167520 Pisum sativum HOM05D005932 ORTHO05D006213 2.0e-10 69.7 135 37.8
MBI18_g11291_MAGBIO Magnolia biondii HOM05D005932 ORTHO05D006213 2.7e-10 69.3 125 40.8
FAN25G3656 Fragaria x ananassa HOM05D005932 ORTHO05D006213 3.5e-10 68.9 106 45.3
Lj2P330T27 Lonicera japonica HOM05D005932 ORTHO05D006213 3.5e-10 68.9 140 37.9
BcaB07g32663 Brassica carinata HOM05D012212 ORTHO05D006213 5.9e-10 68.2 138 39.1
A09p35930 Brassica napus HOM05D012212 ORTHO05D006213 5.9e-10 68.2 127 41.7
Nitab4.5_0005178g0030 Nicotiana tabacum HOM05D005932 ORTHO05D006213 5.9e-10 68.2 146 32.9
PGSC0003DMG400011812 Solanum tuberosum HOM05D005932 ORTHO05D006213 5.9e-10 68.2 140 37.1
BcaB07g32687 Brassica carinata HOM05D012212 ORTHO05D006213 1.0e-09 67.4 124 39.5
C05p29520 Brassica napus HOM05D012212 ORTHO05D006213 1.0e-09 67.4 124 39.5
BolC5t31682H Brassica oleracea HOM05D012212 ORTHO05D006213 1.0e-09 67.4 124 39.5
Migut.M01897 Erythranthe guttata HOM05D005932 ORTHO05D006213 1.7e-09 66.6 121 41.3
Medtr2g030220 Medicago truncatula HOM05D005932 ORTHO05D006213 1.7e-09 66.6 137 37.2
AT1G30515 Arabidopsis thaliana HOM05D012212 ORTHO05D006213 2.3e-09 66.2 140 37.1
BraA09t39118Z Brassica rapa HOM05D012212 ORTHO05D006213 2.3e-09 66.2 131 40.5
Glyma.15G130200 Glycine max HOM05D005932 ORTHO05D006213 2.9e-09 65.9 122 36.9
Aa31LG6G11760 Aethionema arabicum HOM05D012212 ORTHO05D006213 3.8e-09 65.5 134 38.1
Sopen02g006750 Solanum pennellii HOM05D005932 ORTHO05D006213 6.6e-09 64.7 137 35.0
TPR.G26337 Trifolium pratense HOM05D005932 ORTHO05D006213 8.6e-09 64.3 131 36.6
unitig_92.g28172 Utricularia gibba HOM05D005932 ORTHO05D006213 1.1e-08 63.9 124 36.3
AL1G44550 Arabidopsis lyrata HOM05D012212 ORTHO05D006213 1.9e-08 63.2 139 35.3
Eucgr.E02504 Eucalyptus grandis HOM05D005932 ORTHO05D006213 4.3e-08 62.0 130 34.6
Glyma.09G024200 Glycine max HOM05D005932 ORTHO05D006213 7.3e-08 61.2 122 32.8
MELO3C002809.2 Cucumis melo HOM05D005932 ORTHO05D006213 9.5e-08 60.8 106 42.5
ECA238G1329 Erigeron canadensis HOM05D005932 ORTHO05D006213 9.5e-08 60.8 127 34.6
Lsat_1_v5_gn_2_93200 Lactuca sativa HOM05D005932 ORTHO05D006213 1.6e-07 60.1 132 34.1
Nitab4.5_0004615g0090 Nicotiana tabacum HOM05D005932 ORTHO05D006213 3.6e-07 58.9 117 35.9
unitig_37.g12073 Utricularia gibba HOM05D005932 ORTHO05D006213 3.6e-07 58.9 120 34.2
Ca_00842_v3 Cicer arietinum L. HOM05D005932 ORTHO05D006213 8.0e-07 57.8 114 35.1
arahy.Tifrunner.gnm1.ann1.JX8F6E Arachis hypogaea HOM05D005932 ORTHO05D006213 1.0e-06 57.4 133 30.8
Migut.H01328 Erythranthe guttata HOM05D005932 ORTHO05D006213 1.4e-06 57.0 129 37.2
arahy.Tifrunner.gnm1.ann1.2W5S4G Arachis hypogaea HOM05D005932 ORTHO05D006213 1.8e-06 56.6 135 30.4
Carub.0007s1967 Capsella rubella HOM05D005932 ORTHO05D006213 1.8e-06 56.6 127 33.9
Peaxi162Scf00395g00004 Petunia axillaris HOM05D005932 ORTHO05D006213 1.8e-06 56.6 142 33.1
Aa31LG6G3710 Aethionema arabicum HOM05D005932 ORTHO05D006213 2.3e-06 56.2 121 31.4
Thhalv10026499m.g Eutrema salsugineum HOM05D005932 ORTHO05D006213 2.3e-06 56.2 133 31.6
Sopen02g019050 Solanum pennellii HOM05D005932 ORTHO05D006213 6.8e-06 54.7 136 33.1
MBI02_g25782_MAGBIO Magnolia biondii HOM05D005932 ORTHO05D006213 8.9e-06 54.3 126 35.7


User provided reference genes

Program Settings