Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.14G122800 Manihot esculenta HOM05D007012 ORTHO05D008882 3.5e-62 241.5 126 100.0
Hma1.2p1_0333F.1_g128270 Hydrangea macrophylla HOM05D007012 ORTHO05D008882 4.3e-52 208.0 123 87.8
QL05p061226 Quercus lobata HOM05D007012 ORTHO05D008882 7.3e-52 207.2 123 85.4
Atru.chr10.869 Acer truncatum HOM05D007012 ORTHO05D008882 1.2e-51 206.5 119 88.2
TWI73G0699 Tripterygium wilfordii HOM05D007012 ORTHO05D008882 4.0e-50 201.4 123 84.6
Ciclev10017190m.g Citrus clementina HOM05D007012 ORTHO05D008882 5.2e-50 201.1 123 84.6
CiPaw.09G115600 Carya illinoinensis HOM05D007012 ORTHO05D008882 6.8e-50 200.7 123 86.2
Dinv35474 Davidia involucrata HOM05D007012 ORTHO05D008882 6.8e-50 200.7 123 82.1
vmacro03442 Vaccinium macrocarpon HOM05D007012 ORTHO05D008882 6.8e-50 200.7 123 83.7
Cc09_g08050 Coffea canephora HOM05D007012 ORTHO05D008882 8.9e-50 200.3 123 81.3
CSS0014344 Camellia sinensis var. sinensis HOM05D007012 ORTHO05D008882 1.2e-49 199.9 123 83.7
CiPaw.10G085800 Carya illinoinensis HOM05D007012 ORTHO05D008882 1.2e-49 199.9 123 85.4
Thecc.06G001300 Theobroma cacao HOM05D007012 ORTHO05D008882 7.5e-49 197.2 123 81.3
TWI09G0010 Tripterygium wilfordii HOM05D007012 ORTHO05D008882 9.8e-49 196.8 123 82.9
GSVIVG01021626001 Vitis vinifera HOM05D007012 ORTHO05D008882 1.7e-48 196.1 122 81.1
RcHm_v2.0_Chr5g0015911 Rosa chinensis HOM05D007012 ORTHO05D008882 2.2e-48 195.7 122 82.8
Prupe.4G090000 Prunus persica HOM05D007012 ORTHO05D008882 3.7e-48 194.9 123 79.7
Rhsim05G0222100 Rhododendron simsii HOM05D007012 ORTHO05D008882 3.7e-48 194.9 122 82.0
MD10G1253600 Malus domestica HOM05D007012 ORTHO05D008882 4.9e-48 194.5 122 82.0
TAR629G2694 Trochodendron aralioides HOM05D007012 ORTHO05D008882 4.9e-48 194.5 123 82.1
Eucgr.K01942 Eucalyptus grandis HOM05D007012 ORTHO05D008882 1.1e-47 193.4 123 80.5
Peaxi162Scf00100g01517 Petunia axillaris HOM05D007012 ORTHO05D008882 1.1e-47 193.4 123 78.0
FvH4_3g10060 Fragaria vesca HOM05D007012 ORTHO05D008882 1.9e-47 192.6 121 81.8
FAN25G0029 Fragaria x ananassa HOM05D007012 ORTHO05D008882 3.2e-47 191.8 121 81.8
Nitab4.5_0001225g0050 Nicotiana tabacum HOM05D007012 ORTHO05D008882 3.2e-47 191.8 123 78.0
Sed0027179 Sechium edule HOM05D007012 ORTHO05D008882 3.2e-47 191.8 122 79.5
PGR031G1292 Punica granatum HOM05D007012 ORTHO05D008882 4.1e-47 191.4 122 79.5
ClCG02G000770 Citrullus lanatus HOM05D007012 ORTHO05D008882 5.4e-47 191.0 122 79.5
Solyc02g069820.3 Solanum lycopersicum HOM05D007012 ORTHO05D008882 5.4e-47 191.0 123 78.0
Gohir.D06G213600 Gossypium hirsutum HOM05D007012 ORTHO05D008882 7.0e-47 190.7 125 79.2
Gorai.010G252500 Gossypium raimondii HOM05D007012 ORTHO05D008882 7.0e-47 190.7 125 79.2
QL05p061674 Quercus lobata HOM05D007012 ORTHO05D008882 7.0e-47 190.7 155 67.7
MELO3C023274.2 Cucumis melo HOM05D007012 ORTHO05D008882 9.2e-47 190.3 122 78.7
Nitab4.5_0004615g0020 Nicotiana tabacum HOM05D007012 ORTHO05D008882 9.2e-47 190.3 123 78.0
Potri.011G098200 Populus trichocarpa HOM05D007012 ORTHO05D008882 9.2e-47 190.3 118 83.9
PGSC0003DMG400021126 Solanum tuberosum HOM05D007012 ORTHO05D008882 2.0e-46 189.1 123 77.2
FAN21G1693 Fragaria x ananassa HOM05D007012 ORTHO05D008882 2.7e-46 188.7 121 80.2
Gohir.A06G207700 Gossypium hirsutum HOM05D007012 ORTHO05D008882 2.7e-46 188.7 125 78.4
Sopen02g018980 Solanum pennellii HOM05D007012 ORTHO05D008882 2.7e-46 188.7 123 77.2
Actinidia03306 Actinidia chinensis HOM05D007012 ORTHO05D008882 7.8e-46 187.2 123 77.2
Sabra11G0090900 Salix brachista HOM05D007012 ORTHO05D008882 7.8e-46 187.2 118 83.9
Sabra11G0084700 Salix brachista HOM05D007012 ORTHO05D008882 2.3e-45 185.7 118 83.1
CANSAT11G0200 Cannabis sativa HOM05D007012 ORTHO05D008882 3.0e-45 185.3 122 76.2
Lsat_1_v5_gn_1_117760 Lactuca sativa HOM05D007012 ORTHO05D008882 3.9e-45 184.9 123 77.2
CAN.G1520.3 Capsicum annuum HOM05D007012 ORTHO05D008882 8.6e-45 183.7 119 78.2
HanXRQChr15g0468791 Helianthus annuus HOM05D007012 ORTHO05D008882 4.3e-44 181.4 119 78.2
MD05G1273800 Malus domestica HOM05D007012 ORTHO05D008882 7.3e-44 180.6 122 77.0
BcaC06g30880 Brassica carinata HOM05D007012 ORTHO05D008882 1.6e-43 179.5 118 74.6
Glyma.05G166500 Glycine max HOM05D007012 ORTHO05D008882 3.6e-43 178.3 121 71.1
Lalb_Chr12g0204651 Lupinus albus HOM05D007012 ORTHO05D008882 3.6e-43 178.3 122 73.8
THA.LOC104805486 Tarenaya hassleriana HOM05D007012 ORTHO05D008882 8.1e-43 177.2 122 73.0
CARHR152280 Cardamine hirsuta HOM05D007012 ORTHO05D008882 1.4e-42 176.4 118 72.9
Thhalv10005148m.g Eutrema salsugineum HOM05D007012 ORTHO05D008882 1.4e-42 176.4 118 72.9
HPP92_000966 Vanilla planifolia HOM05D007012 ORTHO05D008882 1.4e-42 176.4 124 71.0
BcaC06g33671 Brassica carinata HOM05D007012 ORTHO05D008882 1.8e-42 176.0 118 72.9
C07p38010 Brassica napus HOM05D007012 ORTHO05D008882 1.8e-42 176.0 118 72.9
BolC7t44322H Brassica oleracea HOM05D007012 ORTHO05D008882 1.8e-42 176.0 118 72.9
arahy.Tifrunner.gnm1.ann1.HAVC5G Arachis hypogaea HOM05D007012 ORTHO05D008882 2.3e-42 175.6 121 71.9
PSO675G5463 Papaver somniferum HOM05D007012 ORTHO05D008882 4.0e-42 174.9 122 73.8
AL5G19030 Arabidopsis lyrata HOM05D007012 ORTHO05D008882 5.2e-42 174.5 118 72.0
arahy.Tifrunner.gnm1.ann1.80D497 Arachis hypogaea HOM05D007012 ORTHO05D008882 5.2e-42 174.5 122 70.5
Sc24g0001360 Simmondsia chinensis HOM05D007012 ORTHO05D008882 5.2e-42 174.5 122 74.6
Carub.0005s0786 Capsella rubella HOM05D007012 ORTHO05D008882 8.9e-42 173.7 118 70.3
PSO541G1654 Papaver somniferum HOM05D007012 ORTHO05D008882 8.9e-42 173.7 122 72.1
Sp2g17760 Schrenkiella parvula HOM05D007012 ORTHO05D008882 8.9e-42 173.7 118 71.2
TPR.G6804 Trifolium pratense HOM05D007012 ORTHO05D008882 2.6e-41 172.2 122 68.0
A06p40130 Brassica napus HOM05D007012 ORTHO05D008882 3.4e-41 171.8 118 71.2
AUR62005835 Chenopodium quinoa HOM05D007012 ORTHO05D008882 3.4e-41 171.8 122 72.1
AUR62032828 Chenopodium quinoa HOM05D007012 ORTHO05D008882 3.4e-41 171.8 122 72.1
Aa31LG2G4090 Aethionema arabicum HOM05D007012 ORTHO05D008882 4.4e-41 171.4 118 70.3
ECA248G1541 Erigeron canadensis HOM05D007012 ORTHO05D008882 4.4e-41 171.4 121 74.4
MSTRG.7536 Avicennia marina HOM05D007012 ORTHO05D008882 5.8e-41 171.0 123 69.9
Migut.M00621 Erythranthe guttata HOM05D007012 ORTHO05D008882 5.8e-41 171.0 121 71.9
Migut.M01889 Erythranthe guttata HOM05D007012 ORTHO05D008882 9.8e-41 170.2 121 71.9
Ah.02g129420 Amaranthus hybridus HOM05D007012 ORTHO05D008882 1.3e-40 169.9 122 72.1
Migut.M01890 Erythranthe guttata HOM05D007012 ORTHO05D008882 1.3e-40 169.9 121 71.1
Medtr8g088380 Medicago truncatula HOM05D007012 ORTHO05D008882 1.7e-40 169.5 121 67.8
SGA_v2.0_scaffold1G00245 Striga asiatica HOM05D007012 ORTHO05D008882 2.2e-40 169.1 123 69.9
Phvul.002G246900 Phaseolus vulgaris HOM05D007012 ORTHO05D008882 6.4e-40 167.5 122 68.0
Lj4g0006275 Lotus japonicus HOM05D007012 ORTHO05D008882 8.3e-40 167.2 116 69.8
Psat7g066160 Pisum sativum HOM05D007012 ORTHO05D008882 1.1e-39 166.8 123 65.0
EL10Ac6g13254 Beta vulgaris HOM05D007012 ORTHO05D008882 1.4e-39 166.4 120 72.5
CDE08G0050 Ceratophyllum demersum HOM05D007012 ORTHO05D008882 1.6e-38 162.9 102 76.5
unitig_748.g7806 Utricularia gibba HOM05D007012 ORTHO05D008882 1.6e-38 162.9 119 68.9
SalBow8G4607 Salvia bowleyana HOM05D007012 ORTHO05D008882 2.7e-38 162.2 140 62.1
Sed0002894 Sechium edule HOM05D007012 ORTHO05D008882 7.8e-38 160.6 100 76.0
Cfa000822 Carpinus fangiana HOM05D007012 ORTHO05D008882 5.6e-36 154.5 90 87.8
Hund20768 Selenicereus undatus HOM05D007012 ORTHO05D008882 5.6e-36 154.5 122 66.4
Hma1.2p1_0333F.1_g128260 Hydrangea macrophylla HOM05D007012 ORTHO05D008882 3.6e-35 151.8 89 88.8
Os03g0640400 Oryza sativa ssp. japonica HOM05D007012 ORTHO05D008882 1.4e-34 149.8 122 61.5
Migut.M00618 Erythranthe guttata HOM05D007012 ORTHO05D008882 8.9e-34 147.1 103 70.9
Zm00001eb218740 Zea mays HOM05D007012 ORTHO05D008882 1.5e-33 146.4 121 57.9
SEGI_30962 Sequoiadendron giganteum HOM05D007012 ORTHO05D008882 5.8e-33 144.4 109 64.2
BraA06t26928Z Brassica rapa HOM05D007012 ORTHO05D008882 7.6e-33 144.1 173 48.0
Haze_05817 Corylus avellana HOM05D007012 ORTHO05D008882 3.7e-32 141.7 93 80.6
FAN11G2674 Fragaria x ananassa HOM05D007012 ORTHO05D008882 1.4e-31 139.8 89 82.0
FAN16G3160 Fragaria x ananassa HOM05D007012 ORTHO05D008882 3.2e-31 138.7 89 82.0
AT3G29130 Arabidopsis thaliana HOM05D007012 ORTHO05D008882 1.6e-30 136.3 86 73.3
CsaV3_2G017990 Cucumis sativus L. HOM05D007012 ORTHO05D008882 2.1e-30 136.0 89 78.7
CDE08G0396 Ceratophyllum demersum HOM05D007012 ORTHO05D008882 2.7e-30 135.6 100 68.0
Oeu034103.1 Olea europaea HOM05D007012 ORTHO05D008882 1.3e-29 133.3 90 76.7
Aqoxy1G01570 Aquilegia oxysepala HOM05D007012 ORTHO05D008882 9.6e-28 127.1 96 69.8
VMungo0251G0322 Vigna mungo HOM05D007012 ORTHO05D008882 3.6e-27 125.2 89 67.4
AagrBONN_evm.TU.Sc2ySwM_368.2441 Anthoceros agrestis HOM05D007012 ORTHO05D008882 2.0e-25 119.4 120 52.5
SEGI_05812 Sequoiadendron giganteum HOM05D007012 ORTHO05D008882 3.4e-25 118.6 102 57.8
Pp3c17_18250 Physcomitrium patens HOM05D007012 ORTHO05D008882 2.2e-24 115.9 123 51.2
Mapoly0001s0437 Marchantia polymorpha HOM05D007012 ORTHO05D008882 4.9e-24 114.8 119 47.1
ATR0165G051 Amborella trichopoda HOM05D007012 ORTHO05D008882 7.1e-23 110.9 97 60.8
CBR_g52649 Chara braunii HOM05D007012 ORTHO05D008882 3.5e-22 108.6 123 44.7
AagrBONN_evm.TU.Sc2ySwM_117.2140 Anthoceros agrestis HOM05D007012 ORTHO05D008882 3.9e-21 105.1 84 57.1
Migut.M00617 Erythranthe guttata HOM05D007012 ORTHO05D008882 5.6e-20 101.3 121 48.8
Glyma.08G124500 Glycine max HOM05D007012 ORTHO05D008882 1.6e-19 99.8 54 85.2
Nn3g20226 Nelumbo nucifera HOM05D007012 ORTHO05D008882 3.3e-12 75.5 123 43.1


User provided reference genes

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