Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.14G120121 Manihot esculenta HOM05D000311 ORTHO05D000183 2.0e-152 542.7 339 100.0
Manes.14G136884 Manihot esculenta HOM05D000311 ORTHO05D000183 1.8e-28 131.0 341 47.2
Manes.14G121912 Manihot esculenta HOM05D000311 ORTHO05D000183 2.3e-23 114.0 179 51.4
Manes.14G136500 Manihot esculenta HOM05D000311 ORTHO05D000183 2.5e-22 110.5 374 41.7
Nitab4.5_0003058g0030 Nicotiana tabacum HOM05D000311 ORTHO05D000183 8.3e-18 95.5 230 36.5
QL04p004403 Quercus lobata HOM05D000311 ORTHO05D000183 2.4e-17 94.0 184 43.5
QL93p0073_0079 Quercus lobata HOM05D000311 ORTHO05D000183 1.3e-15 88.2 149 51.0
GSVIVG01012806001 Vitis vinifera HOM05D000191 ORTHO05D000122 1.3e-15 88.2 144 41.0
Gorai.004G051800 Gossypium raimondii HOM05D000311 ORTHO05D000183 1.1e-14 85.1 322 31.7
CSS0006016 Camellia sinensis var. sinensis HOM05D000311 ORTHO05D000183 2.8e-13 80.5 147 44.2
Gohir.D02G026566 Gossypium hirsutum HOM05D000311 ORTHO05D000183 3.6e-13 80.1 171 40.9
Manes.07G133124 Manihot esculenta HOM05D000311 ORTHO05D000183 3.6e-13 80.1 245 36.7
QL04p003704 Quercus lobata HOM05D000311 ORTHO05D000183 4.7e-13 79.7 362 29.3
Oeu029750.1 Olea europaea HOM05D000311 ORTHO05D000183 2.3e-12 77.4 152 35.5
Potri.003G041600 Populus trichocarpa HOM05D000311 ORTHO05D000183 3.1e-12 77.0 208 38.9
QL04p004418 Quercus lobata HOM05D000311 ORTHO05D000183 6.8e-12 75.9 157 46.5
QL04p004370 Quercus lobata HOM05D000311 ORTHO05D000183 8.9e-12 75.5 157 46.5
Potri.001G065300 Populus trichocarpa HOM05D000311 ORTHO05D000183 1.2e-11 75.1 174 42.5
Gorai.013G237000 Gossypium raimondii HOM05D000311 ORTHO05D000183 1.5e-11 74.7 330 29.7
Hma1.2p1_0949F.1_g240700 Hydrangea macrophylla HOM05D000311 ORTHO05D000183 1.5e-11 74.7 124 38.7
Manes.06G044000 Manihot esculenta HOM05D000311 ORTHO05D000183 3.4e-11 73.6 245 40.4
Gohir.A10G217200 Gossypium hirsutum HOM05D000311 ORTHO05D000183 5.8e-11 72.8 146 43.8
QL04p042807 Quercus lobata HOM05D000311 ORTHO05D000183 7.5e-11 72.4 170 43.5
QL05p013956 Quercus lobata HOM05D000311 ORTHO05D000183 1.3e-10 71.6 345 30.4
QL04p004305 Quercus lobata HOM05D000311 ORTHO05D000183 1.7e-10 71.2 137 43.8
Actinidia04232 Actinidia chinensis HOM05D000311 ORTHO05D000183 2.2e-10 70.9 107 53.3
Gorai.011G257100 Gossypium raimondii HOM05D000311 ORTHO05D000183 2.2e-10 70.9 157 43.3
QL04p003897 Quercus lobata HOM05D000311 ORTHO05D000183 2.9e-10 70.5 172 41.9
CiPaw.02G049300 Carya illinoinensis HOM05D000311 ORTHO05D000183 3.7e-10 70.1 159 36.5
Eucgr.C04317 Eucalyptus grandis HOM05D000311 ORTHO05D000183 3.7e-10 70.1 156 34.0
QL04p003552 Quercus lobata HOM05D000311 ORTHO05D000183 3.7e-10 70.1 163 45.4
COL.COLO4_34812 Corchorus olitorius HOM05D000311 ORTHO05D000183 8.3e-10 68.9 275 33.8
Gorai.009G010400 Gossypium raimondii HOM05D000311 ORTHO05D000183 8.3e-10 68.9 163 42.9
arahy.Tifrunner.gnm1.ann1.LKDD8T Arachis hypogaea HOM05D000311 ORTHO05D000183 1.1e-09 68.6 245 36.3
Gohir.D10G225865 Gossypium hirsutum HOM05D000311 ORTHO05D000183 1.1e-09 68.6 255 35.3
QL04p003852 Quercus lobata HOM05D000311 ORTHO05D000183 1.4e-09 68.2 157 43.9
QL04p004575 Quercus lobata HOM05D000311 ORTHO05D000183 1.4e-09 68.2 157 42.7
QL04p004701 Quercus lobata HOM05D000311 ORTHO05D000183 1.4e-09 68.2 157 42.7
Potri.018G120700 Populus trichocarpa HOM05D000311 ORTHO05D000183 1.9e-09 67.8 157 42.7
Eucgr.C04320 Eucalyptus grandis HOM05D000311 ORTHO05D000183 2.4e-09 67.4 106 40.6
Gohir.A10G216900 Gossypium hirsutum HOM05D000311 ORTHO05D000183 3.2e-09 67.0 157 42.0
HanXRQChr04g0097591 Helianthus annuus HOM05D000311 ORTHO05D000183 3.2e-09 67.0 135 36.3
QL04p004735 Quercus lobata HOM05D000311 ORTHO05D000183 3.2e-09 67.0 148 47.3
Solyc11g011180.3 Solanum lycopersicum HOM05D000311 ORTHO05D000183 3.2e-09 67.0 356 35.4
Oeu029749.1 Olea europaea HOM05D000311 ORTHO05D000183 5.4e-09 66.2 325 26.2
Gohir.D06G194500 Gossypium hirsutum HOM05D000311 ORTHO05D000183 7.0e-09 65.9 147 29.9
Gohir.D13G208033 Gossypium hirsutum HOM05D000311 ORTHO05D000183 7.0e-09 65.9 97 37.1
Potri.018G144300 Populus trichocarpa HOM05D000311 ORTHO05D000183 7.0e-09 65.9 176 40.3
TPR.G35160 Trifolium pratense HOM05D000311 ORTHO05D000183 7.0e-09 65.9 233 35.2
Duzib019G0001 Durio zibethinus HOM05D000311 ORTHO05D000183 9.2e-09 65.5 253 32.8
Duzib150G1414 Durio zibethinus HOM05D000311 ORTHO05D000183 9.2e-09 65.5 170 37.6
Manes.14G137200 Manihot esculenta HOM05D000311 ORTHO05D000183 9.2e-09 65.5 187 38.5
Phvul.008G108400 Phaseolus vulgaris HOM05D000311 ORTHO05D000183 9.2e-09 65.5 401 32.9
Nn2g15980 Nelumbo nucifera HOM05D000311 ORTHO05D000183 1.2e-08 65.1 136 45.6
Potri.018G145516 Populus trichocarpa HOM05D000311 ORTHO05D000183 1.2e-08 65.1 176 39.8
Dinv11725 Davidia involucrata HOM05D000311 ORTHO05D000183 2.0e-08 64.3 160 43.1
Gohir.D05G010100 Gossypium hirsutum HOM05D000311 ORTHO05D000183 2.0e-08 64.3 152 46.7
CSS0044420 Camellia sinensis var. sinensis HOM05D000311 ORTHO05D000183 2.7e-08 63.9 164 41.5
Gohir.A05G009400 Gossypium hirsutum HOM05D000311 ORTHO05D000183 2.7e-08 63.9 163 41.7
Manes.14G121884 Manihot esculenta HOM05D000311 ORTHO05D000183 2.7e-08 63.9 169 42.0
Potri.018G117900 Populus trichocarpa HOM05D000311 ORTHO05D000183 2.7e-08 63.9 189 39.2
Thecc.06G032600 Theobroma cacao HOM05D000311 ORTHO05D000183 2.7e-08 63.9 348 28.7
COL.COLO4_20160 Corchorus olitorius HOM05D000311 ORTHO05D000183 3.5e-08 63.5 208 38.0
Gohir.D06G050950 Gossypium hirsutum HOM05D000311 ORTHO05D000183 3.5e-08 63.5 184 41.3
Gohir.D06G196132 Gossypium hirsutum HOM05D000311 ORTHO05D000183 3.5e-08 63.5 147 29.9
Nn2g15942 Nelumbo nucifera HOM05D000311 ORTHO05D000183 3.5e-08 63.5 252 42.1
CSS0000641 Camellia sinensis var. sinensis HOM05D000311 ORTHO05D000183 4.6e-08 63.2 158 42.4
CSS0030458 Camellia sinensis var. sinensis HOM05D000311 ORTHO05D000183 4.6e-08 63.2 165 40.6
CiPaw.15G113300 Carya illinoinensis HOM05D000311 ORTHO05D000183 4.6e-08 63.2 155 43.9
Gohir.A06G188366 Gossypium hirsutum HOM05D000311 ORTHO05D000183 4.6e-08 63.2 153 29.4
QL93p0073_0107 Quercus lobata HOM05D000311 ORTHO05D000183 6.0e-08 62.8 136 47.8
TWI32G0156 Tripterygium wilfordii HOM05D000311 ORTHO05D000183 6.0e-08 62.8 180 41.1
COL.COLO4_33363 Corchorus olitorius HOM05D000311 ORTHO05D000183 7.8e-08 62.4 169 40.8
Manes.11G060199 Manihot esculenta HOM05D000311 ORTHO05D000183 7.8e-08 62.4 216 36.6
Manes.14G120100 Manihot esculenta HOM05D000311 ORTHO05D000183 7.8e-08 62.4 148 45.3
Manes.14G120156 Manihot esculenta HOM05D000311 ORTHO05D000183 7.8e-08 62.4 148 45.3
Manes.14G120240 Manihot esculenta HOM05D000311 ORTHO05D000183 7.8e-08 62.4 148 45.3
Manes.14G137228 Manihot esculenta HOM05D000311 ORTHO05D000183 7.8e-08 62.4 149 45.0
Nn2g15974 Nelumbo nucifera HOM05D000311 ORTHO05D000183 7.8e-08 62.4 56 60.7
Oeu009453.1 Olea europaea HOM05D000311 ORTHO05D000183 7.8e-08 62.4 178 32.0
Glyma.18G195200 Glycine max HOM05D000311 ORTHO05D000183 1.0e-07 62.0 419 28.4
CAN.G222.20 Capsicum annuum HOM05D000311 ORTHO05D000183 1.3e-07 61.6 212 27.4
Gorai.013G236800 Gossypium raimondii HOM05D000311 ORTHO05D000183 1.3e-07 61.6 152 43.4
CAN.G222.21 Capsicum annuum HOM05D000311 ORTHO05D000183 1.7e-07 61.2 251 31.5
CiPaw.15G116400 Carya illinoinensis HOM05D000311 ORTHO05D000183 1.7e-07 61.2 153 43.8
Duzib212G0107 Durio zibethinus HOM05D000311 ORTHO05D000183 2.3e-07 60.8 210 34.3
Gohir.D13G207900 Gossypium hirsutum HOM05D000311 ORTHO05D000183 2.3e-07 60.8 152 42.8
Gorai.010G228600 Gossypium raimondii HOM05D000311 ORTHO05D000183 2.3e-07 60.8 147 29.9
Manes.14G119728 Manihot esculenta HOM05D000311 ORTHO05D000183 2.3e-07 60.8 148 44.6
Peaxi162Scf00305g00618 Petunia axillaris HOM05D000311 ORTHO05D000183 2.3e-07 60.8 156 42.3
Potri.001G064900 Populus trichocarpa HOM05D000311 ORTHO05D000183 2.3e-07 60.8 155 42.6
Duzib187G0962 Durio zibethinus HOM05D000311 ORTHO05D000183 3.0e-07 60.5 131 34.4
Gorai.005G031700 Gossypium raimondii HOM05D000311 ORTHO05D000183 3.0e-07 60.5 157 42.7
Manes.14G136800 Manihot esculenta HOM05D000311 ORTHO05D000183 3.0e-07 60.5 187 39.0
Gohir.D02G072850 Gossypium hirsutum HOM05D000311 ORTHO05D000183 3.9e-07 60.1 280 24.3
Gohir.D05G010050 Gossypium hirsutum HOM05D000311 ORTHO05D000183 3.9e-07 60.1 144 45.1
Thecc.10G149900 Theobroma cacao HOM05D000311 ORTHO05D000183 3.9e-07 60.1 156 41.7
CAN.G222.18 Capsicum annuum HOM05D000311 ORTHO05D000183 5.0e-07 59.7 254 31.1
Dinv35862 Davidia involucrata HOM05D008203 ORTHO05D010058 5.0e-07 59.7 52 59.6
Glyma.18G273000 Glycine max HOM05D000311 ORTHO05D000183 5.0e-07 59.7 253 34.4
Phvul.008G109100 Phaseolus vulgaris HOM05D000311 ORTHO05D000183 5.0e-07 59.7 211 37.0
BolC6t37292H Brassica oleracea HOM05D000311 ORTHO05D000183 6.6e-07 59.3 156 30.8
Ciclev10019556m.g Citrus clementina HOM05D000311 ORTHO05D000183 6.6e-07 59.3 159 41.5
COL.COLO4_23952 Corchorus olitorius HOM05D000311 ORTHO05D000183 6.6e-07 59.3 175 38.3
Dinv08773 Davidia involucrata HOM05D000311 ORTHO05D000183 6.6e-07 59.3 75 44.0
FAN01G1144 Fragaria x ananassa HOM05D000071 ORTHO05D000029 6.6e-07 59.3 254 27.6
Gorai.005G031900 Gossypium raimondii HOM05D000311 ORTHO05D000183 6.6e-07 59.3 211 36.0
Potri.001G064600 Populus trichocarpa HOM05D000311 ORTHO05D000183 6.6e-07 59.3 146 43.2
Potri.001G065309 Populus trichocarpa HOM05D000311 ORTHO05D000183 6.6e-07 59.3 148 44.6
CiPaw.15G114400 Carya illinoinensis HOM05D000311 ORTHO05D000183 8.6e-07 58.9 153 41.8
Oeu010082.1 Olea europaea HOM05D000311 ORTHO05D000183 8.6e-07 58.9 143 43.4
Peaxi162Scf00305g00106 Petunia axillaris HOM05D000311 ORTHO05D000183 8.6e-07 58.9 150 43.3
Prupe.4G122000 Prunus persica HOM05D000071 ORTHO05D000029 8.6e-07 58.9 202 35.1
QL05p023770 Quercus lobata HOM05D000071 ORTHO05D000029 8.6e-07 58.9 212 26.9
Gorai.005G031500 Gossypium raimondii HOM05D000311 ORTHO05D000183 1.1e-06 58.5 110 39.1
Medtr7g066590 Medicago truncatula HOM05D000311 ORTHO05D000183 1.1e-06 58.5 244 34.4
Potri.018G148000 Populus trichocarpa HOM05D000311 ORTHO05D000183 1.1e-06 58.5 146 45.2
TWI34G0710 Tripterygium wilfordii HOM05D000311 ORTHO05D000183 1.1e-06 58.5 136 33.1
Ciclev10000397m.g Citrus clementina HOM05D000311 ORTHO05D000183 1.5e-06 58.2 285 32.3
Ciclev10030334m.g Citrus clementina HOM05D000053 ORTHO05D000035 1.5e-06 58.2 175 29.1
Dinv19809 Davidia involucrata HOM05D000311 ORTHO05D000183 1.5e-06 58.2 140 47.1
Dinv35864 Davidia involucrata HOM05D000311 ORTHO05D000183 1.5e-06 58.2 140 47.1
Duzib184G0004 Durio zibethinus HOM05D000311 ORTHO05D000183 1.5e-06 58.2 156 41.7
Duzib214G0002 Durio zibethinus HOM05D000311 ORTHO05D000183 1.5e-06 58.2 156 41.7
Glyma.07G144100 Glycine max HOM05D000311 ORTHO05D000183 1.5e-06 58.2 147 44.9
Nn2g15943 Nelumbo nucifera HOM05D000311 ORTHO05D000183 1.5e-06 58.2 52 59.6
arahy.Tifrunner.gnm1.ann1.978HCZ Arachis hypogaea HOM05D000311 ORTHO05D000183 1.9e-06 57.8 371 27.5
Gohir.D02G027500 Gossypium hirsutum HOM05D000311 ORTHO05D000183 1.9e-06 57.8 159 42.1
VMungo1127G2119 Vigna mungo HOM05D000311 ORTHO05D000183 1.9e-06 57.8 157 43.3
Dinv01684 Davidia involucrata HOM05D000311 ORTHO05D000183 2.5e-06 57.4 156 41.0
Dinv19812 Davidia involucrata HOM05D000311 ORTHO05D000183 2.5e-06 57.4 157 40.8
Manes.06G042100 Manihot esculenta HOM05D000311 ORTHO05D000183 2.5e-06 57.4 182 37.9
Actinidia23543 Actinidia chinensis HOM05D000311 ORTHO05D000183 3.3e-06 57.0 207 34.8
arahy.Tifrunner.gnm1.ann1.1M4EYD Arachis hypogaea HOM05D000311 ORTHO05D000183 3.3e-06 57.0 238 26.5
Duzib212G0027 Durio zibethinus HOM05D000311 ORTHO05D000183 3.3e-06 57.0 157 42.7
Potri.018G144800 Populus trichocarpa HOM05D000311 ORTHO05D000183 3.3e-06 57.0 38 68.4
QL05p013238 Quercus lobata HOM05D000311 ORTHO05D000183 3.3e-06 57.0 152 42.1
TWI32G0028 Tripterygium wilfordii HOM05D000311 ORTHO05D000183 3.3e-06 57.0 184 39.1
vmacro21891 Vaccinium macrocarpon HOM05D000311 ORTHO05D000183 3.3e-06 57.0 159 42.8
Nn2g15981 Nelumbo nucifera HOM05D000311 ORTHO05D000183 4.3e-06 56.6 86 44.2
Potri.018G118035 Populus trichocarpa HOM05D000311 ORTHO05D000183 4.3e-06 56.6 40 65.0
Potri.018G144600 Populus trichocarpa HOM05D000311 ORTHO05D000183 4.3e-06 56.6 146 42.5
Potri.018G145512 Populus trichocarpa HOM05D000311 ORTHO05D000183 4.3e-06 56.6 156 41.0
COL.COLO4_11857 Corchorus olitorius HOM05D000311 ORTHO05D000183 5.6e-06 56.2 313 28.8
Duzib212G0447 Durio zibethinus HOM05D000311 ORTHO05D000183 5.6e-06 56.2 138 46.4
Gohir.A05G389900 Gossypium hirsutum HOM05D000311 ORTHO05D000183 5.6e-06 56.2 157 39.5
MBI18_g41218_MAGBIO Magnolia biondii HOM05D000311 ORTHO05D000183 5.6e-06 56.2 144 43.1
Manes.14G120177 Manihot esculenta HOM05D000311 ORTHO05D000183 5.6e-06 56.2 141 44.7
Nn8g39655 Nelumbo nucifera HOM05D000311 ORTHO05D000183 5.6e-06 56.2 188 36.7
Potri.018G118062 Populus trichocarpa HOM05D000311 ORTHO05D000183 5.6e-06 56.2 204 38.2
Nn8g40065 Nelumbo nucifera HOM05D000311 ORTHO05D000183 7.3e-06 55.8 148 43.9
Nitab4.5_0001621g0050 Nicotiana tabacum HOM05D000311 ORTHO05D000183 7.3e-06 55.8 151 41.7
Peaxi162Scf00152g01341 Petunia axillaris HOM05D000311 ORTHO05D000183 7.3e-06 55.8 81 40.7
Potri.001G063900 Populus trichocarpa HOM05D000311 ORTHO05D000183 7.3e-06 55.8 176 37.5
vmacro07752 Vaccinium macrocarpon HOM05D000311 ORTHO05D000183 7.3e-06 55.8 151 43.0
Atru.chr12.2416 Acer truncatum HOM05D000311 ORTHO05D000183 9.5e-06 55.5 198 36.9
Duzib212G0774 Durio zibethinus HOM05D000311 ORTHO05D000183 9.5e-06 55.5 147 44.9
Gohir.D02G027250 Gossypium hirsutum HOM05D000311 ORTHO05D000183 9.5e-06 55.5 147 42.9
Gohir.D13G208066 Gossypium hirsutum HOM05D000311 ORTHO05D000183 9.5e-06 55.5 143 42.0
Gorai.004G054100 Gossypium raimondii HOM05D000311 ORTHO05D000183 9.5e-06 55.5 149 40.9
Gorai.013G237100 Gossypium raimondii HOM05D000311 ORTHO05D000183 9.5e-06 55.5 143 42.0
Potri.001G063300 Populus trichocarpa HOM05D000311 ORTHO05D000183 9.5e-06 55.5 146 43.2
Potri.018G144700 Populus trichocarpa HOM05D000311 ORTHO05D000183 9.5e-06 55.5 146 44.5
PGR064G0010 Punica granatum HOM05D000311 ORTHO05D000183 9.5e-06 55.5 155 44.5
QL05p013580 Quercus lobata HOM05D000311 ORTHO05D000183 9.5e-06 55.5 152 42.1


User provided reference genes

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