Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.14G113600 Manihot esculenta HOM05D006256 ORTHO05D007833 3.1e-73 278.5 152 100.0
Potri.018G102700 Populus trichocarpa HOM05D006256 ORTHO05D007833 3.0e-52 208.8 152 78.9
Sabra18G0088200 Salix brachista HOM05D006256 ORTHO05D007833 4.1e-49 198.4 152 77.6
Thecc.09G154100 Theobroma cacao HOM05D006256 ORTHO05D007833 5.0e-47 191.4 153 73.2
COL.COLO4_05401 Corchorus olitorius HOM05D006256 ORTHO05D007833 1.9e-46 189.5 153 72.5
Duzib187G1001 Durio zibethinus HOM05D006256 ORTHO05D007833 3.9e-44 181.8 153 71.2
Cpa.g.sc199.16 Carica papaya HOM05D006256 ORTHO05D007833 8.8e-44 180.6 152 71.7
Atru.chr7.353 Acer truncatum HOM05D006256 ORTHO05D007833 2.2e-42 176.0 152 71.1
Nn2g12458 Nelumbo nucifera HOM05D006256 ORTHO05D007833 4.8e-42 174.9 152 71.7
MELO3C010199.2 Cucumis melo HOM05D006256 ORTHO05D007833 1.1e-41 173.7 152 70.4
CiPaw.15G164300 Carya illinoinensis HOM05D006256 ORTHO05D007833 1.4e-41 173.3 153 69.9
Eucgr.C02515 Eucalyptus grandis HOM05D006256 ORTHO05D007833 1.4e-41 173.3 151 67.5
Sed0025015 Sechium edule HOM05D006256 ORTHO05D007833 2.4e-41 172.6 150 70.7
ClCG06G012650 Citrullus lanatus HOM05D006256 ORTHO05D007833 3.1e-41 172.2 151 68.9
CsaV3_1G029200 Cucumis sativus L. HOM05D006256 ORTHO05D007833 5.3e-41 171.4 151 68.2
PGR102G0560 Punica granatum HOM05D006256 ORTHO05D007833 7.0e-41 171.0 157 66.9
CANSAT11G0095 Cannabis sativa HOM05D006256 ORTHO05D007833 9.1e-41 170.6 151 66.9
Aa31LG7G12680 Aethionema arabicum HOM05D006256 ORTHO05D007833 3.5e-40 168.7 153 66.0
Haze_19139 Corylus avellana HOM05D006256 ORTHO05D007833 3.5e-40 168.7 154 69.5
Eucgr.L01548 Eucalyptus grandis HOM05D006256 ORTHO05D007833 1.0e-39 167.2 151 66.2
CiPaw.16G106600 Carya illinoinensis HOM05D006256 ORTHO05D007833 1.3e-39 166.8 132 74.2
Cfa020783 Carpinus fangiana HOM05D006256 ORTHO05D007833 1.7e-39 166.4 154 68.2
Gohir.D08G098900 Gossypium hirsutum HOM05D006256 ORTHO05D007833 1.7e-39 166.4 130 73.1
Gohir.A08G087800 Gossypium hirsutum HOM05D006256 ORTHO05D007833 2.9e-39 165.6 130 73.1
THA.LOC104803911 Tarenaya hassleriana HOM05D006256 ORTHO05D007833 3.8e-39 165.2 159 64.8
Ciclev10009792m.g Citrus clementina HOM05D006256 ORTHO05D007833 6.5e-39 164.5 150 68.7
Gorai.004G106500 Gossypium raimondii HOM05D006256 ORTHO05D007833 1.1e-38 163.7 128 73.4
TWI32G1056 Tripterygium wilfordii HOM05D006256 ORTHO05D007833 1.9e-38 162.9 152 65.1
TAR626G0939 Trochodendron aralioides HOM05D006256 ORTHO05D007833 2.5e-38 162.5 150 66.0
C08p39560 Brassica napus HOM05D006256 ORTHO05D007833 5.5e-38 161.4 152 65.8
BolC8t51529H Brassica oleracea HOM05D006256 ORTHO05D007833 5.5e-38 161.4 152 65.8
FAN17G2907 Fragaria x ananassa HOM05D006256 ORTHO05D007833 7.2e-38 161.0 153 66.7
FAN17G2911 Fragaria x ananassa HOM05D006256 ORTHO05D007833 7.2e-38 161.0 153 66.7
arahy.Tifrunner.gnm1.ann1.6DRS7R Arachis hypogaea HOM05D006256 ORTHO05D007833 9.4e-38 160.6 153 65.4
Sp4g02990 Schrenkiella parvula HOM05D006256 ORTHO05D007833 2.1e-37 159.5 153 66.0
A09p56610 Brassica napus HOM05D006256 ORTHO05D007833 2.7e-37 159.1 153 65.4
BraA09t41052Z Brassica rapa HOM05D006256 ORTHO05D007833 2.7e-37 159.1 153 65.4
FAN07G0991 Fragaria x ananassa HOM05D006256 ORTHO05D007833 2.7e-37 159.1 153 66.0
Lj4g0007171 Lotus japonicus HOM05D006256 ORTHO05D007833 2.7e-37 159.1 130 72.3
arahy.Tifrunner.gnm1.ann1.RJ4A7B Arachis hypogaea HOM05D006256 ORTHO05D007833 3.6e-37 158.7 153 65.4
Thhalv10000362m.g Eutrema salsugineum HOM05D006256 ORTHO05D007833 3.6e-37 158.7 153 64.7
BcaC07g40961 Brassica carinata HOM05D006256 ORTHO05D007833 4.7e-37 158.3 153 65.4
Dinv43283 Davidia involucrata HOM05D006256 ORTHO05D007833 4.7e-37 158.3 150 64.0
A04p18400 Brassica napus HOM05D006256 ORTHO05D007833 1.0e-36 157.1 153 65.4
BraA04t17452Z Brassica rapa HOM05D006256 ORTHO05D007833 1.0e-36 157.1 153 65.4
FAN22G0392 Fragaria x ananassa HOM05D006256 ORTHO05D007833 1.0e-36 157.1 153 66.0
VMungo1215G1943 Vigna mungo HOM05D006256 ORTHO05D007833 1.0e-36 157.1 149 65.1
Hma1.2p1_1084F.1_g255300 Hydrangea macrophylla HOM05D006256 ORTHO05D007833 1.4e-36 156.8 152 64.5
Prupe.1G102100 Prunus persica HOM05D006256 ORTHO05D007833 1.4e-36 156.8 129 70.5
CDE02G1547 Ceratophyllum demersum HOM05D006256 ORTHO05D007833 2.3e-36 156.0 156 62.8
CDE05G2121 Ceratophyllum demersum HOM05D006256 ORTHO05D007833 3.0e-36 155.6 110 78.2
RcHm_v2.0_Chr4g0405501 Rosa chinensis HOM05D006256 ORTHO05D007833 3.0e-36 155.6 153 64.7
Phvul.003G153700 Phaseolus vulgaris HOM05D006256 ORTHO05D007833 5.2e-36 154.8 145 67.6
TAR383G0166 Trochodendron aralioides HOM05D006256 ORTHO05D007833 2.0e-35 152.9 150 62.0
AT2G24090 Arabidopsis thaliana HOM05D006256 ORTHO05D007833 4.4e-35 151.8 153 62.7
FvH4_4g09690 Fragaria vesca HOM05D006256 ORTHO05D007833 4.4e-35 151.8 149 64.4
Glyma.02G206700 Glycine max HOM05D006256 ORTHO05D007833 4.4e-35 151.8 131 70.2
C04p53670 Brassica napus HOM05D006256 ORTHO05D007833 7.5e-35 151.0 153 63.4
BolC4t26923H Brassica oleracea HOM05D006256 ORTHO05D007833 9.7e-35 150.6 153 63.4
CARHR118260 Cardamine hirsuta HOM05D006256 ORTHO05D007833 9.7e-35 150.6 153 61.4
AL4G14180 Arabidopsis lyrata HOM05D006256 ORTHO05D007833 1.3e-34 150.2 153 60.8
Glyma.17G071200 Glycine max HOM05D006256 ORTHO05D007833 2.8e-34 149.1 123 71.5
MSTRG.10713 Avicennia marina HOM05D006256 ORTHO05D007833 1.1e-33 147.1 147 61.9
Carub.0004s0326 Capsella rubella HOM05D006256 ORTHO05D007833 1.8e-33 146.4 153 60.1
Actinidia38660 Actinidia chinensis HOM05D006256 ORTHO05D007833 2.4e-33 146.0 150 59.3
MD04G1052200 Malus domestica HOM05D006256 ORTHO05D007833 2.4e-33 146.0 147 67.3
CSS0035436 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 9.1e-33 144.1 154 63.0
MBI15_g35737_MAGBIO Magnolia biondii HOM05D006256 ORTHO05D007833 9.1e-33 144.1 152 59.9
EL10Ac8g18906 Beta vulgaris HOM05D006256 ORTHO05D007833 1.6e-32 143.3 137 64.2
Oeu010284.1 Olea europaea HOM05D006256 ORTHO05D007833 2.7e-32 142.5 148 57.4
PSO170G3639 Papaver somniferum HOM05D006256 ORTHO05D007833 3.5e-32 142.1 155 59.4
PSO063G2398 Papaver somniferum HOM05D006256 ORTHO05D007833 4.5e-32 141.7 159 58.5
Lalb_Chr13g0300681 Lupinus albus HOM05D006256 ORTHO05D007833 1.7e-31 139.8 151 60.9
Medtr4g130300 Medicago truncatula HOM05D006256 ORTHO05D007833 1.7e-31 139.8 152 58.6
Psat7g006560 Pisum sativum HOM05D006256 ORTHO05D007833 6.5e-31 137.9 151 60.3
SEGI_40166 Sequoiadendron giganteum HOM05D006256 ORTHO05D007833 1.5e-30 136.7 136 64.0
SGA_v2.0_scaffold222G42778 Striga asiatica HOM05D006256 ORTHO05D007833 1.5e-30 136.7 147 59.2
Cc06_g14490 Coffea canephora HOM05D006256 ORTHO05D007833 3.2e-30 135.6 127 65.4
Migut.J01392 Erythranthe guttata HOM05D006256 ORTHO05D007833 4.2e-30 135.2 147 58.5
ECA234G3762 Erigeron canadensis HOM05D006256 ORTHO05D007833 7.2e-30 134.4 128 63.3
Gohir.A04G058552 Gossypium hirsutum HOM05D006256 ORTHO05D007833 9.4e-30 134.0 144 59.7
HanXRQChr10g0307761 Helianthus annuus HOM05D006256 ORTHO05D007833 2.1e-29 132.9 150 58.7
Lsat_1_v5_gn_5_88481 Lactuca sativa HOM05D006256 ORTHO05D007833 2.1e-29 132.9 150 58.7
SalBow1G2070 Salvia bowleyana HOM05D006256 ORTHO05D007833 2.1e-29 132.9 151 58.3
Aqoxy7G03320 Aquilegia oxysepala HOM05D006256 ORTHO05D007833 3.6e-29 132.1 153 59.5
AUR62025373 Chenopodium quinoa HOM05D006256 ORTHO05D007833 6.1e-29 131.3 156 57.7
HanXRQChr12g0357751 Helianthus annuus HOM05D006256 ORTHO05D007833 8.0e-29 131.0 151 57.6
HPP92_010352 Vanilla planifolia HOM05D006256 ORTHO05D007833 8.0e-29 131.0 155 56.1
AUR62028378 Chenopodium quinoa HOM05D006256 ORTHO05D007833 5.2e-28 128.3 151 58.3
GSVIVG01012574001 Vitis vinifera HOM05D006256 ORTHO05D007833 8.8e-28 127.5 68 94.1
vmacro06052 Vaccinium macrocarpon HOM05D006256 ORTHO05D007833 1.5e-27 126.7 151 53.6
Zm00001eb386680 Zea mays HOM05D006256 ORTHO05D007833 1.5e-27 126.7 99 75.8
Migut.K00301 Erythranthe guttata HOM05D006256 ORTHO05D007833 3.4e-27 125.6 149 54.4
GSVIVG01012561001 Vitis vinifera HOM05D006256 ORTHO05D007833 3.4e-27 125.6 67 94.0
Solyc07g006000.3 Solanum lycopersicum HOM05D006256 ORTHO05D007833 5.7e-27 124.8 152 56.6
Sopen07g002140 Solanum pennellii HOM05D006256 ORTHO05D007833 5.7e-27 124.8 152 56.6
PGSC0003DMG400011211 Solanum tuberosum HOM05D006256 ORTHO05D007833 7.5e-27 124.4 152 56.6
Nitab4.5_0001036g0150 Nicotiana tabacum HOM05D006256 ORTHO05D007833 1.3e-26 123.6 150 56.7
Peaxi162Scf00563g00414 Petunia axillaris HOM05D006256 ORTHO05D007833 1.3e-26 123.6 150 56.0
Nitab4.5_0006744g0050 Nicotiana tabacum HOM05D006256 ORTHO05D007833 1.7e-26 123.2 150 56.0
Hund08959 Selenicereus undatus HOM05D006256 ORTHO05D007833 1.7e-26 123.2 153 57.5
Os06g0647100 Oryza sativa ssp. japonica HOM05D006256 ORTHO05D007833 2.8e-26 122.5 105 66.7
CSS0023303 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 3.7e-26 122.1 143 57.3
Dinv42817 Davidia involucrata HOM05D006256 ORTHO05D007833 8.3e-26 120.9 126 61.1
unitig_748.g7194 Utricularia gibba HOM05D006256 ORTHO05D007833 4.5e-24 115.2 150 55.3
QL02p094215 Quercus lobata HOM05D006256 ORTHO05D007833 1.3e-23 113.6 128 58.6
MBI15_g42789_MAGBIO Magnolia biondii HOM05D006256 ORTHO05D007833 3.8e-23 112.1 126 55.6
BcaC02g08498 Brassica carinata HOM05D006256 ORTHO05D007833 6.5e-23 111.3 153 52.3
ATR0580G126 Amborella trichopoda HOM05D006256 ORTHO05D007833 6.1e-21 104.8 107 64.5
Actinidia33300 Actinidia chinensis HOM05D006256 ORTHO05D007833 3.0e-20 102.4 149 51.0
Ah.09g228670 Amaranthus hybridus HOM05D006256 ORTHO05D007833 2.0e-19 99.8 232 38.8
SMO164G0197 Selaginella moellendorffii HOM05D006256 ORTHO05D007833 4.4e-19 98.6 88 59.1
CBR_g46223 Chara braunii HOM05D006256 ORTHO05D007833 4.9e-18 95.1 73 69.9
Rhsim03G0259400 Rhododendron simsii HOM05D006256 ORTHO05D007833 3.1e-17 92.4 88 60.2
TPR.G24835 Trifolium pratense HOM05D006256 ORTHO05D007833 2.7e-16 89.4 125 51.2
Pp3c22_13420 Physcomitrium patens HOM05D006256 ORTHO05D007833 4.5e-16 88.6 118 49.2
CAN.G1190.22 Capsicum annuum HOM05D006256 ORTHO05D007833 5.9e-16 88.2 122 54.9
Mapoly0027s0042 Marchantia polymorpha HOM05D006256 ORTHO05D007833 7.8e-16 87.8 149 47.0
CSS0026373 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 8.9e-12 74.3 112 52.7
Pp3c21_8680 Physcomitrium patens HOM05D006256 ORTHO05D007833 2.2e-10 69.7 172 37.8
SGA_v2.0_scaffold12G06024 Striga asiatica HOM05D006256 ORTHO05D007833 2.9e-10 69.3 107 48.6
Pp3c21_8670 Physcomitrium patens HOM05D004684 ORTHO05D006904 2.0e-08 63.2 118 45.8
Zm00001eb000270 Zea mays HOM05D006256 ORTHO05D007833 1.0e-07 60.8 48 75.0
Cfa020782 Carpinus fangiana HOM05D006256 ORTHO05D007833 1.3e-07 60.5 93 52.7
PRCOL_00001020 Prasinoderma coloniale HOM05D006256 ORTHO05D007833 3.9e-07 58.9 63 47.6
MCO09G536 Micromonas commoda HOM05D006256 ORTHO05D007833 3.3e-06 55.8 92 37.0
Sed0004136 Sechium edule HOM05D006256 ORTHO05D007833 9.5e-06 54.3 88 44.3


User provided reference genes

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