Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.14G101800 Manihot esculenta HOM05D008456 ORTHO05D010229 1.8e-44 182.2 89 100.0
Haze_17475 Corylus avellana HOM05D008456 ORTHO05D010229 2.0e-19 99.0 90 64.4
CiPaw.16G064600 Carya illinoinensis HOM05D008456 ORTHO05D010229 3.4e-19 98.2 89 62.9
Gohir.A12G167400 Gossypium hirsutum HOM05D008456 ORTHO05D010229 2.2e-18 95.5 97 58.8
Gohir.D12G170800 Gossypium hirsutum HOM05D008456 ORTHO05D010229 1.1e-17 93.2 97 58.8
Gorai.008G183400 Gossypium raimondii HOM05D008456 ORTHO05D010229 1.1e-17 93.2 97 58.8
CiPaw.15G084200 Carya illinoinensis HOM05D008456 ORTHO05D010229 1.8e-17 92.4 89 57.3
GSVIVG01011903001 Vitis vinifera HOM05D008456 ORTHO05D010229 1.8e-17 92.4 92 63.0
CSS0032252 Camellia sinensis var. sinensis HOM05D008456 ORTHO05D010229 3.1e-17 91.7 89 60.7
Potri.010G125700 Populus trichocarpa HOM05D008456 ORTHO05D010229 3.1e-17 91.7 97 56.7
Gorai.013G076200 Gossypium raimondii HOM05D008456 ORTHO05D010229 4.1e-17 91.3 89 59.6
Actinidia16647 Actinidia chinensis HOM05D008456 ORTHO05D010229 9.1e-17 90.1 89 60.7
Lj3C1016G2 Lonicera japonica HOM05D008456 ORTHO05D010229 1.2e-16 89.7 89 61.8
Gohir.D13G066900 Gossypium hirsutum HOM05D008456 ORTHO05D010229 2.0e-16 89.0 89 58.4
Gohir.A13G055200 Gossypium hirsutum HOM05D008456 ORTHO05D010229 3.5e-16 88.2 89 58.4
Thecc.02G355800 Theobroma cacao HOM05D008456 ORTHO05D010229 4.5e-16 87.8 95 57.9
FAN22G1960 Fragaria x ananassa HOM05D008456 ORTHO05D010229 1.0e-15 86.7 94 51.1
Prupe.1G310000 Prunus persica HOM05D008456 ORTHO05D010229 2.3e-15 85.5 89 55.1
CsaV3_6G003500 Cucumis sativus L. HOM05D008456 ORTHO05D010229 2.9e-15 85.1 90 57.8
FvH4_4g27490 Fragaria vesca HOM05D008456 ORTHO05D010229 2.9e-15 85.1 94 50.0
FAN12G3215 Fragaria x ananassa HOM05D008456 ORTHO05D010229 6.6e-15 84.0 94 48.9
CSS0026237 Camellia sinensis var. sinensis HOM05D008456 ORTHO05D010229 1.9e-14 82.4 89 56.2
EL10Ac6g14422 Beta vulgaris HOM05D008456 ORTHO05D010229 4.2e-14 81.3 89 57.3
CSS0028970 Camellia sinensis var. sinensis HOM05D008456 ORTHO05D010229 9.5e-14 80.1 89 56.2
ECA233G2223 Erigeron canadensis HOM05D008456 ORTHO05D010229 2.1e-13 79.0 85 57.6
Manes.06G069000 Manihot esculenta HOM05D008456 ORTHO05D010229 2.1e-13 79.0 94 56.4
arahy.Tifrunner.gnm1.ann1.J0DG7J Arachis hypogaea HOM05D008456 ORTHO05D010229 3.6e-13 78.2 84 54.8
MD16G1043600 Malus domestica HOM05D008456 ORTHO05D010229 4.7e-13 77.8 89 49.4
SalBow8G1526 Salvia bowleyana HOM05D008456 ORTHO05D010229 4.7e-13 77.8 93 58.1
Hund25068 Selenicereus undatus HOM05D008456 ORTHO05D010229 4.7e-13 77.8 90 57.8
Lj5g0022784 Lotus japonicus HOM05D008456 ORTHO05D010229 1.0e-12 76.6 65 64.6
vmacro10553 Vaccinium macrocarpon HOM05D008456 ORTHO05D010229 2.3e-12 75.5 79 58.2
Glyma.10G274651 Glycine max HOM05D008456 ORTHO05D010229 3.0e-12 75.1 92 53.3
Sabra10G0095500 Salix brachista HOM05D008456 ORTHO05D010229 3.0e-12 75.1 88 51.1
Sabra08G0091200 Salix brachista HOM05D008456 ORTHO05D010229 5.2e-12 74.3 91 53.8
Cc11_g10220 Coffea canephora HOM05D008456 ORTHO05D010229 1.5e-11 72.8 95 53.7
CiPaw.03G230800 Carya illinoinensis HOM05D008456 ORTHO05D010229 7.5e-11 70.5 116 43.1
Oeu014305.1 Olea europaea HOM05D000497 ORTHO05D002300 9.8e-11 70.1 87 52.9
FAN12G0383 Fragaria x ananassa HOM05D008456 ORTHO05D010229 2.2e-10 68.9 89 47.2
TAR374G1021 Trochodendron aralioides HOM05D008456 ORTHO05D010229 2.2e-10 68.9 89 51.7
Solyc05g009460.3 Solanum lycopersicum HOM05D008456 ORTHO05D010229 4.9e-10 67.8 91 52.7
Phvul.007G026950 Phaseolus vulgaris HOM05D008456 ORTHO05D010229 8.3e-10 67.0 103 43.7
Medtr8g023670 Medicago truncatula HOM05D008456 ORTHO05D010229 1.1e-09 66.6 93 53.8
TAR622G0689 Trochodendron aralioides HOM05D008456 ORTHO05D010229 1.1e-09 66.6 89 50.6
Nitab4.5_0003330g0080 Nicotiana tabacum HOM05D008456 ORTHO05D010229 1.4e-09 66.2 53 64.2
Sc04g0006490 Simmondsia chinensis HOM05D008456 ORTHO05D010229 2.4e-09 65.5 89 51.7
Migut.E00334 Erythranthe guttata HOM05D008456 ORTHO05D010229 1.6e-08 62.8 92 50.0
Lj6C759T21 Lonicera japonica HOM05D000497 ORTHO05D002300 2.9e-07 58.5 70 55.7
Potri.008G120050 Populus trichocarpa HOM05D008456 ORTHO05D010229 2.9e-07 58.5 91 49.5
THA.LOC104821939 Tarenaya hassleriana HOM05D011059 ORTHO05D010229 2.9e-07 58.5 87 47.1
Glyma.20G115200 Glycine max HOM05D008456 ORTHO05D010229 1.1e-06 56.6 117 40.2
Aa31LG7G9030 Aethionema arabicum HOM05D011059 ORTHO05D010229 1.9e-06 55.8 83 48.2
A02p15160 Brassica napus HOM05D011059 ORTHO05D010229 5.6e-06 54.3 86 50.0
BraA02t06581Z Brassica rapa HOM05D011059 ORTHO05D010229 5.6e-06 54.3 86 50.0
Migut.L01069 Erythranthe guttata HOM05D008456 ORTHO05D010229 5.6e-06 54.3 66 53.0
Carub.0002s1507 Capsella rubella HOM05D011059 ORTHO05D010229 7.3e-06 53.9 89 47.2
C02p24890 Brassica napus HOM05D011059 ORTHO05D010229 9.5e-06 53.5 84 50.0
BolC2t08582H Brassica oleracea HOM05D011059 ORTHO05D010229 9.5e-06 53.5 84 50.0
BolC6t38857H Brassica oleracea HOM05D011059 ORTHO05D010229 9.5e-06 53.5 90 46.7


User provided reference genes

Program Settings