Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.14G099300 Manihot esculenta HOM05D007842 ORTHO05D009661 7.5e-92 340.5 171 100.0
Manes.06G070700 Manihot esculenta HOM05D007842 ORTHO05D009661 2.3e-32 142.9 176 56.8
QL01p044511 Quercus lobata HOM05D007842 ORTHO05D009661 1.7e-19 100.1 139 48.9
COL.COLO4_07888 Corchorus olitorius HOM05D007842 ORTHO05D009661 2.1e-17 93.2 120 50.0
Cfa007650 Carpinus fangiana HOM05D007842 ORTHO05D009661 1.0e-16 90.9 135 47.4
Hma1.2p1_0030F.1_g018270 Hydrangea macrophylla HOM05D007842 ORTHO05D009661 1.9e-15 86.7 132 43.9
CiPaw.03G089900 Carya illinoinensis HOM05D007842 ORTHO05D009661 1.3e-14 84.0 120 44.2
Thecc.02G358800 Theobroma cacao HOM05D007842 ORTHO05D009661 6.2e-14 81.6 138 44.2
Potri.010G127900 Populus trichocarpa HOM05D007842 ORTHO05D009661 1.1e-13 80.9 125 40.8
Dinv21114 Davidia involucrata HOM05D007842 ORTHO05D009661 1.8e-13 80.1 135 43.7
Sabra10G0097200 Salix brachista HOM05D007842 ORTHO05D009661 4.1e-13 79.0 130 40.8
CiPaw.04G057000 Carya illinoinensis HOM05D007842 ORTHO05D009661 5.3e-13 78.6 122 42.6
Potri.009G097500 Populus trichocarpa HOM05D007842 ORTHO05D009661 2.6e-12 76.3 131 39.7
Migut.L01087 Erythranthe guttata HOM05D007842 ORTHO05D009661 7.6e-12 74.7 134 40.3
Actinidia14866 Actinidia chinensis HOM05D007842 ORTHO05D009661 3.8e-11 72.4 120 40.0
Manes.14G099200 Manihot esculenta HOM05D007842 ORTHO05D009661 5.0e-11 72.0 128 41.4
Lj5g0000394 Lotus japonicus HOM05D007842 ORTHO05D009661 6.5e-11 71.6 125 36.0
Rhsim09G0110600 Rhododendron simsii HOM05D007842 ORTHO05D009661 8.4e-11 71.2 103 43.7
Actinidia38383 Actinidia chinensis HOM05D007842 ORTHO05D009661 2.5e-10 69.7 142 38.7
Gohir.A12G169100 Gossypium hirsutum HOM05D007842 ORTHO05D009661 4.2e-10 68.9 126 41.3
TWI31G1443 Tripterygium wilfordii HOM05D007842 ORTHO05D009661 4.2e-10 68.9 119 41.2
Actinidia04615 Actinidia chinensis HOM05D007842 ORTHO05D009661 7.1e-10 68.2 146 37.0
SalBow8G3786 Salvia bowleyana HOM05D007842 ORTHO05D009661 7.1e-10 68.2 137 38.0
SalBow8G5078 Salvia bowleyana HOM05D007842 ORTHO05D009661 7.1e-10 68.2 137 38.0
Gohir.D12G172400 Gossypium hirsutum HOM05D007842 ORTHO05D009661 1.2e-09 67.4 126 41.3
Oeu041893.1 Olea europaea HOM05D007842 ORTHO05D009661 1.2e-09 67.4 146 36.3
Glyma.10G276000 Glycine max HOM05D007842 ORTHO05D009661 1.6e-09 67.0 120 40.8
VMungo0720G1629 Vigna mungo HOM05D007842 ORTHO05D009661 3.5e-09 65.9 137 35.8
Oeu004600.1 Olea europaea HOM05D007842 ORTHO05D009661 6.1e-09 65.1 133 39.1
Actinidia16632 Actinidia chinensis HOM05D007842 ORTHO05D009661 7.9e-09 64.7 121 38.0
Medtr1g111300 Medicago truncatula HOM05D007842 ORTHO05D009661 1.3e-08 63.9 137 32.1
SGA_v2.0_scaffold124G33571 Striga asiatica HOM05D007842 ORTHO05D009661 1.8e-08 63.5 113 41.6
TPR.G26298 Trifolium pratense HOM05D007842 ORTHO05D009661 2.3e-08 63.2 126 34.9
SalBow8G0003 Salvia bowleyana HOM05D007842 ORTHO05D009661 3.9e-08 62.4 129 38.8
Gorai.008G184900 Gossypium raimondii HOM05D007842 ORTHO05D009661 1.9e-07 60.1 126 39.7
Eucgr.B03033 Eucalyptus grandis HOM05D007842 ORTHO05D009661 3.3e-07 59.3 128 35.9
DCAR_007231 Daucus carota HOM05D007842 ORTHO05D009661 4.3e-07 58.9 125 36.8
Lj2g0000320 Lotus japonicus HOM05D007842 ORTHO05D009661 4.3e-07 58.9 125 34.4
Glyma.02G097800 Glycine max HOM05D007842 ORTHO05D009661 7.4e-07 58.2 120 40.0
TAR629G0634 Trochodendron aralioides HOM05D000414 ORTHO05D000276 7.4e-07 58.2 153 33.3
Glyma.20G113700 Glycine max HOM05D007842 ORTHO05D009661 9.7e-07 57.8 120 32.5
Phvul.007G025600 Phaseolus vulgaris HOM05D007842 ORTHO05D009661 9.7e-07 57.8 137 37.2
RcHm_v2.0_Chr4g0435601 Rosa chinensis HOM05D022909 ORTHO05D009661 9.7e-07 57.8 108 38.0
Manes.06G070800 Manihot esculenta HOM05D007842 ORTHO05D009661 1.3e-06 57.4 127 33.9
Haze_14444 Corylus avellana HOM05D007842 ORTHO05D009661 1.6e-06 57.0 89 44.9
Peaxi162Scf00380g00818 Petunia axillaris HOM05D007842 ORTHO05D009661 2.8e-06 56.2 130 36.9
arahy.Tifrunner.gnm1.ann1.3ZRF2C Arachis hypogaea HOM05D007842 ORTHO05D009661 4.8e-06 55.5 143 38.5
Prupe.1G307400 Prunus persica HOM05D007842 ORTHO05D009661 4.8e-06 55.5 131 39.7
MSTRG.13511 Avicennia marina HOM05D007842 ORTHO05D009661 6.3e-06 55.1 130 33.8
Lsat_1_v5_gn_4_18800 Lactuca sativa HOM05D007842 ORTHO05D009661 6.3e-06 55.1 137 32.1
MSTRG.7679 Avicennia marina HOM05D007842 ORTHO05D009661 8.2e-06 54.7 132 36.4


User provided reference genes

Program Settings