Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.14G099200 Manihot esculenta HOM05D007842 ORTHO05D009661 1.2e-67 259.6 122 100.0
Manes.06G070800 Manihot esculenta HOM05D007842 ORTHO05D009661 1.7e-29 132.9 124 59.7
QL01p044511 Quercus lobata HOM05D007842 ORTHO05D009661 8.1e-24 114.0 125 49.6
CiPaw.04G057000 Carya illinoinensis HOM05D007842 ORTHO05D009661 2.0e-22 109.4 126 50.0
COL.COLO4_07888 Corchorus olitorius HOM05D007842 ORTHO05D009661 2.0e-22 109.4 125 48.0
Thecc.02G358800 Theobroma cacao HOM05D007842 ORTHO05D009661 4.4e-22 108.2 95 53.7
Potri.010G127900 Populus trichocarpa HOM05D007842 ORTHO05D009661 9.9e-22 107.1 122 50.8
TPR.G26298 Trifolium pratense HOM05D007842 ORTHO05D009661 9.9e-22 107.1 115 48.7
Sabra10G0097200 Salix brachista HOM05D007842 ORTHO05D009661 1.1e-20 103.6 127 50.4
Glyma.10G276000 Glycine max HOM05D007842 ORTHO05D009661 4.2e-20 101.7 109 50.5
TWI31G1443 Tripterygium wilfordii HOM05D007842 ORTHO05D009661 3.5e-19 98.6 119 47.9
Cfa007650 Carpinus fangiana HOM05D007842 ORTHO05D009661 1.3e-18 96.7 126 43.7
CiPaw.03G089900 Carya illinoinensis HOM05D007842 ORTHO05D009661 1.3e-18 96.7 106 43.4
Hma1.2p1_0030F.1_g018270 Hydrangea macrophylla HOM05D007842 ORTHO05D009661 1.3e-18 96.7 126 46.8
Glyma.20G113700 Glycine max HOM05D007842 ORTHO05D009661 3.0e-18 95.5 123 43.1
Lj5g0000394 Lotus japonicus HOM05D007842 ORTHO05D009661 6.6e-18 94.4 125 48.0
Potri.009G097500 Populus trichocarpa HOM05D007842 ORTHO05D009661 6.6e-18 94.4 124 44.4
Actinidia14866 Actinidia chinensis HOM05D007842 ORTHO05D009661 1.1e-17 93.6 127 46.5
Dinv21114 Davidia involucrata HOM05D007842 ORTHO05D009661 5.6e-17 91.3 126 46.0
VMungo0720G1629 Vigna mungo HOM05D007842 ORTHO05D009661 9.6e-17 90.5 109 45.9
Rhsim09G0110600 Rhododendron simsii HOM05D007842 ORTHO05D009661 1.6e-16 89.7 107 48.6
TAR629G0634 Trochodendron aralioides HOM05D000414 ORTHO05D000276 1.6e-16 89.7 124 47.6
Medtr1g111300 Medicago truncatula HOM05D007842 ORTHO05D009661 1.1e-15 87.0 124 41.9
Actinidia16632 Actinidia chinensis HOM05D007842 ORTHO05D009661 1.4e-15 86.7 110 46.4
Phvul.007G025600 Phaseolus vulgaris HOM05D007842 ORTHO05D009661 1.8e-15 86.3 109 45.9
Gohir.A12G169100 Gossypium hirsutum HOM05D007842 ORTHO05D009661 4.5e-14 81.6 122 41.8
Lj2g0000320 Lotus japonicus HOM05D007842 ORTHO05D009661 4.5e-14 81.6 114 43.9
Gohir.D12G172400 Gossypium hirsutum HOM05D007842 ORTHO05D009661 1.7e-13 79.7 120 43.3
Actinidia04615 Actinidia chinensis HOM05D007842 ORTHO05D009661 4.9e-13 78.2 136 42.6
Manes.14G099300 Manihot esculenta HOM05D007842 ORTHO05D009661 4.9e-13 78.2 128 41.4
Actinidia38383 Actinidia chinensis HOM05D007842 ORTHO05D009661 6.4e-13 77.8 128 43.0
Gorai.008G184900 Gossypium raimondii HOM05D007842 ORTHO05D009661 1.1e-12 77.0 121 42.1
SalBow8G0003 Salvia bowleyana HOM05D007842 ORTHO05D009661 5.4e-12 74.7 112 42.0
SalBow8G3786 Salvia bowleyana HOM05D007842 ORTHO05D009661 5.4e-12 74.7 120 38.3
Oeu004600.1 Olea europaea HOM05D007842 ORTHO05D009661 9.3e-12 73.9 117 41.9
Atru.chr11.1326 Acer truncatum HOM05D007842 ORTHO05D009661 1.2e-11 73.6 64 59.4
MSTRG.13511 Avicennia marina HOM05D007842 ORTHO05D009661 1.2e-11 73.6 115 38.3
MSTRG.7679 Avicennia marina HOM05D007842 ORTHO05D009661 1.6e-11 73.2 114 37.7
SalBow8G5078 Salvia bowleyana HOM05D007842 ORTHO05D009661 1.6e-11 73.2 120 37.5
TAR371G0248 Trochodendron aralioides HOM05D007842 ORTHO05D009661 1.6e-11 73.2 119 42.0
Migut.L01087 Erythranthe guttata HOM05D007842 ORTHO05D009661 2.7e-11 72.4 122 37.7
Hma1.2p1_0030F.1_g018290 Hydrangea macrophylla HOM05D007842 ORTHO05D009661 3.5e-11 72.0 116 37.9
SGA_v2.0_scaffold124G33571 Striga asiatica HOM05D007842 ORTHO05D009661 6.0e-11 71.2 105 42.9
arahy.Tifrunner.gnm1.ann1.3ZRF2C Arachis hypogaea HOM05D007842 ORTHO05D009661 1.0e-10 70.5 122 38.5
Eucgr.B03033 Eucalyptus grandis HOM05D007842 ORTHO05D009661 3.9e-10 68.6 114 41.2
Peaxi162Scf00380g00818 Petunia axillaris HOM05D007842 ORTHO05D009661 3.9e-10 68.6 117 40.2
Solyc05g009650.4 Solanum lycopersicum HOM05D007842 ORTHO05D009661 1.9e-09 66.2 125 37.6
Actinidia13668 Actinidia chinensis HOM05D007842 ORTHO05D009661 2.5e-09 65.9 141 36.9
DCAR_007231 Daucus carota HOM05D007842 ORTHO05D009661 2.5e-09 65.9 123 39.0
Lalb_Chr17g0342001 Lupinus albus HOM05D007842 ORTHO05D009661 4.3e-09 65.1 92 39.1
RcHm_v2.0_Chr4g0435601 Rosa chinensis HOM05D022909 ORTHO05D009661 4.3e-09 65.1 112 39.3
ECA246G3435 Erigeron canadensis HOM05D007842 ORTHO05D009661 5.6e-09 64.7 111 37.8
Oeu044385.1 Olea europaea HOM05D007842 ORTHO05D009661 7.4e-09 64.3 82 47.6
Oeu041893.1 Olea europaea HOM05D007842 ORTHO05D009661 9.6e-09 63.9 110 38.2
Sopen05g005460 Solanum pennellii HOM05D007842 ORTHO05D009661 9.6e-09 63.9 125 39.2
Sed0016132 Sechium edule HOM05D030371 ORTHO05D009661 1.3e-08 63.5 114 36.8
Prupe.1G307400 Prunus persica HOM05D007842 ORTHO05D009661 2.1e-08 62.8 126 36.5
Glyma.02G097800 Glycine max HOM05D007842 ORTHO05D009661 3.7e-08 62.0 116 41.4
Lsat_1_v5_gn_4_18820 Lactuca sativa HOM05D007842 ORTHO05D009661 3.7e-08 62.0 122 36.1
Lsat_1_v5_gn_4_18840 Lactuca sativa HOM05D007842 ORTHO05D009661 4.8e-08 61.6 121 37.2
Gohir.D13G070950 Gossypium hirsutum HOM05D007842 ORTHO05D009661 1.1e-07 60.5 109 39.4
Gohir.A13G053568 Gossypium hirsutum HOM05D007842 ORTHO05D009661 1.4e-07 60.1 109 39.4
Gorai.013G081200 Gossypium raimondii HOM05D007842 ORTHO05D009661 1.4e-07 60.1 109 39.4
Manes.06G070700 Manihot esculenta HOM05D007842 ORTHO05D009661 1.8e-07 59.7 132 36.4
CsaV3_5G034090 Cucumis sativus L. HOM05D030371 ORTHO05D009661 2.4e-07 59.3 111 36.9
Nitab4.5_0003642g0020 Nicotiana tabacum HOM05D007842 ORTHO05D009661 2.4e-07 59.3 101 37.6
Haze_14444 Corylus avellana HOM05D007842 ORTHO05D009661 5.3e-07 58.2 91 35.2
arahy.Tifrunner.gnm1.ann1.S09ETB Arachis hypogaea HOM05D007842 ORTHO05D009661 6.9e-07 57.8 136 33.8
Lsat_1_v5_gn_3_59860 Lactuca sativa HOM05D007842 ORTHO05D009661 9.0e-07 57.4 115 33.9
Lsat_1_v5_gn_3_59880 Lactuca sativa HOM05D007842 ORTHO05D009661 1.5e-06 56.6 121 35.5
HanXRQChr17g0568001 Helianthus annuus HOM05D007842 ORTHO05D009661 2.0e-06 56.2 114 37.7
Lsat_1_v5_gn_4_18860 Lactuca sativa HOM05D007842 ORTHO05D009661 3.4e-06 55.5 122 35.2
FAN07G2083 Fragaria x ananassa HOM05D022909 ORTHO05D009661 1.0e-05 53.9 118 31.4


User provided reference genes

Program Settings