Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.14G098500 Manihot esculenta HOM05D004993 ORTHO05D008532 2.7e-194 681.8 337 100.0
Cfa018620 Carpinus fangiana HOM05D004993 ORTHO05D008532 2.4e-150 535.8 332 80.4
TAR371G0197 Trochodendron aralioides HOM05D004993 ORTHO05D008532 1.9e-147 526.2 338 76.9
GSVIVG01011941001 Vitis vinifera HOM05D004993 ORTHO05D008532 1.2e-146 523.5 336 76.2
TWI31G0395 Tripterygium wilfordii HOM05D004993 ORTHO05D008532 2.1e-146 522.7 338 77.5
Gohir.A12G170200 Gossypium hirsutum HOM05D004993 ORTHO05D008532 7.9e-146 520.8 339 75.5
Potri.008G117600 Populus trichocarpa HOM05D004993 ORTHO05D008532 1.8e-145 519.6 337 79.2
Thecc.02G359900 Theobroma cacao HOM05D004993 ORTHO05D008532 2.3e-145 519.2 340 75.3
Gohir.D12G173500 Gossypium hirsutum HOM05D004993 ORTHO05D008532 3.9e-145 518.5 339 75.2
Gorai.008G186000 Gossypium raimondii HOM05D004993 ORTHO05D008532 3.3e-144 515.4 339 74.6
Haze_17449 Corylus avellana HOM05D004993 ORTHO05D008532 9.7e-144 513.8 387 69.3
CiPaw.16G003600 Carya illinoinensis HOM05D004993 ORTHO05D008532 1.3e-143 513.5 325 76.3
Gorai.008G185400 Gossypium raimondii HOM05D004993 ORTHO05D008532 4.8e-143 511.5 338 75.7
Nn3g17764 Nelumbo nucifera HOM05D004993 ORTHO05D008532 2.4e-142 509.2 339 73.7
COL.COLO4_07879 Corchorus olitorius HOM05D004993 ORTHO05D008532 3.1e-142 508.8 341 74.8
Gohir.D12G172900 Gossypium hirsutum HOM05D004993 ORTHO05D008532 4.1e-142 508.4 338 75.1
CSS0044433 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 9.1e-142 507.3 340 73.8
MSTRG.7682 Avicennia marina HOM05D004993 ORTHO05D008532 5.9e-141 504.6 336 72.3
Gohir.A12G169600 Gossypium hirsutum HOM05D004993 ORTHO05D008532 7.7e-141 504.2 334 74.9
Hma1.2p1_0862F.1_g229950 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 5.0e-140 501.5 342 74.3
Cc11_g10510 Coffea canephora HOM05D004993 ORTHO05D008532 8.5e-140 500.7 328 75.0
Prupe.1G306400 Prunus persica HOM05D004993 ORTHO05D008532 1.1e-139 500.4 332 75.3
Dinv16501 Davidia involucrata HOM05D004993 ORTHO05D008532 1.5e-139 500.0 313 77.6
Ciclev10031998m.g Citrus clementina HOM05D004993 ORTHO05D008532 2.1e-138 496.1 342 72.2
Duzib251G0893 Durio zibethinus HOM05D004993 ORTHO05D008532 2.7e-138 495.7 347 72.6
MD16G1046900 Malus domestica HOM05D004993 ORTHO05D008532 2.7e-138 495.7 325 76.3
Phvul.003G028100 Phaseolus vulgaris HOM05D004993 ORTHO05D008532 4.7e-138 495.0 335 74.0
CANSAT64G2606 Cannabis sativa HOM05D004993 ORTHO05D008532 9.7e-136 487.3 334 72.8
VMungo1215G2957 Vigna mungo HOM05D004993 ORTHO05D008532 8.2e-135 484.2 334 72.8
Sabra08G0089200 Salix brachista HOM05D004993 ORTHO05D008532 1.2e-133 480.3 415 63.4
Glyma.02G098700 Glycine max HOM05D004993 ORTHO05D008532 1.6e-133 479.9 338 72.2
Nitab4.5_0000582g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 1.6e-133 479.9 336 71.1
Lalb_Chr17g0341941 Lupinus albus HOM05D004993 ORTHO05D008532 5.9e-133 478.0 309 74.1
CsaV3_5G034030 Cucumis sativus L. HOM05D004993 ORTHO05D008532 2.9e-132 475.7 339 70.5
PGR102G1294 Punica granatum HOM05D004993 ORTHO05D008532 5.0e-132 474.9 339 71.4
Sc04g0006640 Simmondsia chinensis HOM05D004993 ORTHO05D008532 1.5e-131 473.4 344 71.2
Lj3A1018T65 Lonicera japonica HOM05D004993 ORTHO05D008532 2.5e-131 472.6 287 79.1
Atru.chr11.1340 Acer truncatum HOM05D004993 ORTHO05D008532 4.2e-131 471.9 311 75.2
Lj2g0001269 Lotus japonicus HOM05D004993 ORTHO05D008532 1.6e-130 469.9 280 78.9
MELO3C012219.2 Cucumis melo HOM05D004993 ORTHO05D008532 3.6e-130 468.8 337 70.0
RcHm_v2.0_Chr4g0435691 Rosa chinensis HOM05D004993 ORTHO05D008532 8.0e-130 467.6 345 70.1
FvH4_4g27971 Fragaria vesca HOM05D004993 ORTHO05D008532 1.4e-129 466.8 345 70.1
arahy.Tifrunner.gnm1.ann1.VJ59XU Arachis hypogaea HOM05D004993 ORTHO05D008532 3.0e-129 465.7 343 68.5
SalBow8G3546 Salvia bowleyana HOM05D004993 ORTHO05D008532 3.0e-129 465.7 335 69.3
FAN07G2608 Fragaria x ananassa HOM05D004993 ORTHO05D008532 4.0e-129 465.3 345 69.9
QL01p044817 Quercus lobata HOM05D004993 ORTHO05D008532 8.8e-129 464.2 309 75.1
arahy.Tifrunner.gnm1.ann1.5ZE4QE Arachis hypogaea HOM05D004993 ORTHO05D008532 3.4e-128 462.2 337 68.2
FAN17G0685 Fragaria x ananassa HOM05D004993 ORTHO05D008532 2.8e-127 459.1 285 79.6
THA.LOC104808209 Tarenaya hassleriana HOM05D004993 ORTHO05D008532 2.8e-127 459.1 293 74.4
Lsat_1_v5_gn_4_20101 Lactuca sativa HOM05D004993 ORTHO05D008532 3.7e-127 458.8 339 67.8
MBI16_g25106_MAGBIO Magnolia biondii HOM05D004993 ORTHO05D008532 6.3e-127 458.0 289 77.2
CSS0008970 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 1.1e-126 457.2 345 67.8
TPR.G38312 Trifolium pratense HOM05D004993 ORTHO05D008532 1.1e-126 457.2 336 68.2
vmacro01368 Vaccinium macrocarpon HOM05D004993 ORTHO05D008532 1.8e-126 456.4 383 62.1
Aqoxy3G03926 Aquilegia oxysepala HOM05D004993 ORTHO05D008532 1.2e-125 453.8 322 70.8
RhsimUnG0136600 Rhododendron simsii HOM05D004993 ORTHO05D008532 1.2e-125 453.8 340 66.2
CAN.G630.88 Capsicum annuum HOM05D004993 ORTHO05D008532 2.7e-125 452.6 340 68.5
HanXRQChr17g0567931 Helianthus annuus HOM05D004993 ORTHO05D008532 2.2e-124 449.5 322 68.3
PSO063G3032 Papaver somniferum HOM05D004993 ORTHO05D008532 3.8e-124 448.7 338 67.8
Aa31LG6G5980 Aethionema arabicum HOM05D004993 ORTHO05D008532 8.5e-124 447.6 337 66.5
EL10Ac6g14467 Beta vulgaris HOM05D004993 ORTHO05D008532 3.6e-122 442.2 352 65.6
Migut.O00833 Erythranthe guttata HOM05D004993 ORTHO05D008532 3.6e-122 442.2 287 72.8
Sed0024124 Sechium edule HOM05D004993 ORTHO05D008532 4.7e-122 441.8 338 67.8
AL1G43530 Arabidopsis lyrata HOM05D004993 ORTHO05D008532 1.0e-121 440.7 341 66.6
Sp1g25580 Schrenkiella parvula HOM05D004993 ORTHO05D008532 1.0e-121 440.7 342 67.3
C03p76040 Brassica napus HOM05D004993 ORTHO05D008532 4.0e-121 438.7 342 65.5
BcaC01g00125 Brassica carinata HOM05D004993 ORTHO05D008532 5.2e-121 438.3 342 65.5
A08p24930 Brassica napus HOM05D004993 ORTHO05D008532 5.2e-121 438.3 342 65.2
SGA_v2.0_scaffold209G42027 Striga asiatica HOM05D004993 ORTHO05D008532 5.2e-121 438.3 364 62.4
BolC3t19860H Brassica oleracea HOM05D004993 ORTHO05D008532 6.8e-121 438.0 342 65.5
AUR62002913 Chenopodium quinoa HOM05D004993 ORTHO05D008532 6.8e-121 438.0 346 63.3
BraA08t34448Z Brassica rapa HOM05D004993 ORTHO05D008532 1.2e-120 437.2 342 65.8
AT1G29700 Arabidopsis thaliana HOM05D004993 ORTHO05D008532 3.4e-120 435.6 341 65.7
Carub.0001s2791 Capsella rubella HOM05D004993 ORTHO05D008532 5.7e-120 434.9 283 73.5
BcaB03g12171 Brassica carinata HOM05D004993 ORTHO05D008532 9.8e-120 434.1 340 65.0
PGSC0003DMG402001731 Solanum tuberosum HOM05D004993 ORTHO05D008532 1.3e-119 433.7 339 65.5
unitig_8.g3446 Utricularia gibba HOM05D004993 ORTHO05D008532 1.3e-119 433.7 336 64.3
CARHR029050 Cardamine hirsuta HOM05D004993 ORTHO05D008532 2.2e-119 433.0 283 73.5
Sopen03g030820 Solanum pennellii HOM05D004993 ORTHO05D008532 3.7e-119 432.2 341 65.7
Solyc03g111700.3 Solanum lycopersicum HOM05D004993 ORTHO05D008532 4.9e-119 431.8 305 70.5
AUR62035273 Chenopodium quinoa HOM05D004993 ORTHO05D008532 1.1e-118 430.6 285 71.6
Eucgr.B03043 Eucalyptus grandis HOM05D004993 ORTHO05D008532 4.1e-118 428.7 311 68.5
ECA234G2629 Erigeron canadensis HOM05D004993 ORTHO05D008532 1.2e-117 427.2 298 71.5
Medtr5g054360 Medicago truncatula HOM05D004993 ORTHO05D008532 1.2e-114 417.2 307 68.7
Hund05759 Selenicereus undatus HOM05D000924 ORTHO05D001209 1.0e-113 414.1 408 55.1
ATR0681G095 Amborella trichopoda HOM05D004993 ORTHO05D008532 1.5e-112 410.2 318 65.4
Peaxi162Scf00004g01611 Petunia axillaris HOM05D004993 ORTHO05D008532 2.6e-112 409.5 280 72.5
CDE04G2310 Ceratophyllum demersum HOM05D004993 ORTHO05D008532 1.4e-110 403.7 337 61.7
HPP92_005309 Vanilla planifolia HOM05D004993 ORTHO05D008532 8.6e-108 394.4 313 62.0
PSO782G1223 Papaver somniferum HOM05D004993 ORTHO05D008532 2.8e-106 389.4 326 62.9
Nitab4.5_0004719g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 6.2e-106 388.3 336 60.7
CiPaw.15G004200 Carya illinoinensis HOM05D004993 ORTHO05D008532 8.3e-103 377.9 316 64.6
Thhalv10009499m.g Eutrema salsugineum HOM05D004993 ORTHO05D008532 9.2e-102 374.4 339 59.6
Mapoly0053s0088 Marchantia polymorpha HOM05D004993 ORTHO05D008532 3.9e-92 342.4 286 56.3
SMO361G0287 Selaginella moellendorffii HOM05D004993 ORTHO05D008532 6.6e-92 341.7 258 61.6
MD13G1045600 Malus domestica HOM05D004993 ORTHO05D008532 8.9e-89 331.3 320 57.5
Os12g0641300 Oryza sativa ssp. japonica HOM05D004993 ORTHO05D008532 2.6e-88 329.7 275 60.4
Ah.02g127080 Amaranthus hybridus HOM05D004993 ORTHO05D008532 9.9e-88 327.8 345 54.8
Pp3c15_25860 Physcomitrium patens HOM05D004993 ORTHO05D008532 1.9e-86 323.6 280 56.4
AagrBONN_evm.TU.Sc2ySwM_344.778 Anthoceros agrestis HOM05D004993 ORTHO05D008532 2.8e-82 309.7 253 56.5
Zm00001eb133920 Zea mays HOM05D004993 ORTHO05D008532 4.0e-81 305.8 279 57.7
Migut.L01091 Erythranthe guttata HOM05D004993 ORTHO05D008532 7.6e-72 275.0 157 77.7
Psat2g091800 Pisum sativum HOM05D004993 ORTHO05D008532 1.1e-70 271.2 221 62.9
Actinidia38387 Actinidia chinensis HOM05D004993 ORTHO05D008532 2.1e-66 256.9 147 83.7
Cpa.g.c35723 Carica papaya HOM05D004993 ORTHO05D008532 6.7e-60 235.3 136 81.6
Hma1.2p1_0862F.1_g229960 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 6.7e-60 235.3 134 86.6
Ca_20419_v3 Cicer arietinum L. HOM05D004993 ORTHO05D008532 2.1e-58 230.3 135 81.5
CBR_g46806 Chara braunii HOM05D004993 ORTHO05D008532 1.3e-52 211.1 271 40.6
ECA248G2500 Erigeron canadensis HOM05D004993 ORTHO05D008532 3.3e-51 206.5 284 44.4
SEGI_28994 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 4.6e-45 186.0 134 61.9
Actinidia13671 Actinidia chinensis HOM05D004993 ORTHO05D008532 9.0e-41 171.8 112 75.9
Pp3c27_8380 Physcomitrium patens HOM05D004993 ORTHO05D008532 1.0e-31 141.7 297 34.0
Cre10.g442950 Chlamydomonas reinhardtii HOM05D004993 ORTHO05D008532 3.8e-31 139.8 324 29.6
MCO14G082 Micromonas commoda HOM05D004993 ORTHO05D008532 1.9e-30 137.5 288 33.3
SEGI_13194 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 1.4e-17 94.7 88 53.4
Actinidia38386 Actinidia chinensis HOM05D004993 ORTHO05D008532 1.6e-16 91.3 87 55.2
CARHR029040 Cardamine hirsuta HOM05D004993 ORTHO05D008532 1.3e-15 88.2 99 48.5
Migut.G01033 Erythranthe guttata HOM05D004993 ORTHO05D008532 1.7e-10 71.2 52 59.6


User provided reference genes

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