Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.14G096100 Manihot esculenta HOM05D008579 ORTHO05D010245 3.1e-44 181.4 91 100.0
Manes.06G074200 Manihot esculenta HOM05D008579 ORTHO05D010245 7.6e-27 123.6 93 68.8
Potri.010G131500 Populus trichocarpa HOM05D008579 ORTHO05D010245 2.5e-14 82.0 88 55.7
Potri.008G114600 Populus trichocarpa HOM05D008579 ORTHO05D010245 3.3e-14 81.6 89 52.8
Thecc.02G363200 Theobroma cacao HOM05D008579 ORTHO05D010245 6.3e-13 77.4 91 51.6
Gohir.A12G172600 Gossypium hirsutum HOM05D008579 ORTHO05D010245 8.2e-13 77.0 95 47.4
Gohir.D12G175100 Gossypium hirsutum HOM05D008579 ORTHO05D010245 8.2e-13 77.0 95 47.4
Ciclev10033191m.g Citrus clementina HOM05D008579 ORTHO05D010245 1.1e-12 76.6 86 51.2
Gorai.008G187700 Gossypium raimondii HOM05D008579 ORTHO05D010245 3.1e-12 75.1 98 45.9
Prupe.1G303500 Prunus persica HOM05D008579 ORTHO05D010245 1.7e-10 69.3 94 41.5
Haze_17414 Corylus avellana HOM05D008579 ORTHO05D010245 3.8e-10 68.2 92 44.6
COL.COLO4_07854 Corchorus olitorius HOM05D008579 ORTHO05D010245 5.5e-09 64.3 35 80.0
Nn4g23678 Nelumbo nucifera HOM05D008579 ORTHO05D010245 7.2e-09 63.9 86 45.3
Lsat_1_v5_gn_4_17220 Lactuca sativa HOM05D008579 ORTHO05D010245 1.6e-08 62.8 86 46.5
Hma1.2p1_0605F.1_g187880 Hydrangea macrophylla HOM05D008579 ORTHO05D010245 3.6e-08 61.6 78 38.5
Glyma.20G185000 Glycine max HOM05D008579 ORTHO05D010245 1.0e-07 60.1 89 41.6
RcHm_v2.0_Chr4g0436131 Rosa chinensis HOM05D008579 ORTHO05D010245 1.0e-07 60.1 68 41.2
Nn3g17676 Nelumbo nucifera HOM05D008579 ORTHO05D010245 1.4e-07 59.7 61 49.2
Phvul.007G101400 Phaseolus vulgaris HOM05D008579 ORTHO05D010245 1.8e-07 59.3 89 40.4
ClCG05G023140 Citrullus lanatus HOM05D008579 ORTHO05D010245 2.3e-07 58.9 70 45.7
CsaV3_5G033860 Cucumis sativus L. HOM05D008579 ORTHO05D010245 3.0e-07 58.5 45 57.8
Sabra08G0086800 Salix brachista HOM05D008579 ORTHO05D010245 6.7e-07 57.4 81 44.4
QL01p000876 Quercus lobata HOM05D008579 ORTHO05D010245 1.1e-06 56.6 91 37.4
Sed0026635 Sechium edule HOM05D008579 ORTHO05D010245 1.5e-06 56.2 91 40.7
Glyma.10G205400 Glycine max HOM05D008579 ORTHO05D010245 2.0e-06 55.8 89 40.4
Sed0027044 Sechium edule HOM05D008579 ORTHO05D010245 2.6e-06 55.5 32 71.9
Glyma.01G090400 Glycine max HOM05D008579 ORTHO05D010245 4.4e-06 54.7 84 38.1
CSS0039536 Camellia sinensis var. sinensis HOM05D008579 ORTHO05D010245 5.7e-06 54.3 45 57.8
MELO3C012204.2 Cucumis melo HOM05D008579 ORTHO05D010245 7.4e-06 53.9 30 76.7
Peaxi162Scf00188g00055 Petunia axillaris HOM05D013623 ORTHO05D014564 7.4e-06 53.9 88 43.2
Glyma.02G131300 Glycine max HOM05D008579 ORTHO05D010245 9.7e-06 53.5 87 39.1


User provided reference genes

Program Settings