Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.14G094400 Manihot esculenta HOM05D004568 ORTHO05D005343 2.0e-182 642.5 364 100.0
Manes.06G076600 Manihot esculenta HOM05D004568 ORTHO05D005343 9.8e-158 560.5 366 82.5
Potri.010G133600 Populus trichocarpa HOM05D004568 ORTHO05D005343 3.5e-131 472.2 400 71.0
Potri.008G109600 Populus trichocarpa HOM05D004568 ORTHO05D005343 4.9e-125 451.8 390 71.3
Potri.T062072 Populus trichocarpa HOM05D004568 ORTHO05D005343 1.4e-124 450.3 390 71.3
Sabra10G0102200 Salix brachista HOM05D004568 ORTHO05D005343 3.2e-124 449.1 407 67.8
Thecc.09G210800 Theobroma cacao HOM05D004568 ORTHO05D005343 1.3e-106 390.6 407 59.0
Sabra08G0083400 Salix brachista HOM05D004568 ORTHO05D005343 1.3e-104 384.0 389 59.9
Cfa008803 Carpinus fangiana HOM05D004568 ORTHO05D005343 2.4e-103 379.8 407 54.3
QL03p044380 Quercus lobata HOM05D004568 ORTHO05D005343 1.7e-101 373.6 408 55.4
Duzib168G1705 Durio zibethinus HOM05D004568 ORTHO05D005343 1.1e-100 370.9 411 53.8
Cpa.g.sc1.257 Carica papaya HOM05D004568 ORTHO05D005343 1.0e-98 364.4 412 58.5
CiPaw.05G118300 Carya illinoinensis HOM05D004568 ORTHO05D005343 2.3e-98 363.2 403 55.1
Atru.chr11.1442 Acer truncatum HOM05D004568 ORTHO05D005343 9.6e-97 357.8 418 54.3
Atru.chr11.1472 Acer truncatum HOM05D004568 ORTHO05D005343 9.6e-97 357.8 418 54.3
Prupe.1G299900 Prunus persica HOM05D004568 ORTHO05D005343 8.1e-96 354.8 429 51.3
TWI75G0122 Tripterygium wilfordii HOM05D004568 ORTHO05D005343 2.4e-95 353.2 397 57.7
TWI79G0507 Tripterygium wilfordii HOM05D004568 ORTHO05D005343 1.0e-93 347.8 398 56.3
ClCG05G023290 Citrullus lanatus HOM05D004568 ORTHO05D005343 2.9e-93 346.3 399 55.4
MELO3C012188.2 Cucumis melo HOM05D004568 ORTHO05D005343 2.9e-93 346.3 393 59.5
Duzib251G0342 Durio zibethinus HOM05D004568 ORTHO05D005343 3.8e-93 345.9 403 55.3
Thecc.02G315200 Theobroma cacao HOM05D004568 ORTHO05D005343 4.2e-92 342.4 390 54.1
CiPaw.06G097400 Carya illinoinensis HOM05D004568 ORTHO05D005343 1.2e-91 340.9 399 55.6
CsaV3_5G033720 Cucumis sativus L. HOM05D004568 ORTHO05D005343 2.7e-91 339.7 401 57.9
Ciclev10033580m.g Citrus clementina HOM05D004568 ORTHO05D005343 6.0e-91 338.6 425 54.4
VMungo1215G2036 Vigna mungo HOM05D004568 ORTHO05D005343 2.5e-89 333.2 408 51.5
COL.COLO4_34999 Corchorus olitorius HOM05D004568 ORTHO05D005343 1.6e-88 330.5 417 50.1
CANSAT64G0418 Cannabis sativa HOM05D004568 ORTHO05D005343 1.2e-86 324.3 431 49.9
Gohir.A03G108200 Gossypium hirsutum HOM05D004568 ORTHO05D005343 3.2e-84 316.2 404 50.7
Gorai.005G149300 Gossypium raimondii HOM05D004568 ORTHO05D005343 9.3e-84 314.7 404 50.5
Duzib268G1242 Durio zibethinus HOM05D004568 ORTHO05D005343 1.6e-83 313.9 388 53.4
Gohir.D02G133400 Gossypium hirsutum HOM05D004568 ORTHO05D005343 7.9e-83 311.6 405 50.1
Lalb_Chr10g0099511 Lupinus albus HOM05D004568 ORTHO05D005343 4.3e-81 305.8 398 49.7
Lj2g0022626 Lotus japonicus HOM05D004568 ORTHO05D005343 4.8e-80 302.4 407 47.7
COL.COLO4_27716 Corchorus olitorius HOM05D004568 ORTHO05D005343 6.3e-80 302.0 406 52.7
Sed0022479 Sechium edule HOM05D004568 ORTHO05D005343 3.1e-79 299.7 400 50.5
MD13G1052200 Malus domestica HOM05D004568 ORTHO05D005343 4.5e-78 295.8 414 47.3
RcHm_v2.0_Chr4g0436671 Rosa chinensis HOM05D004568 ORTHO05D005343 5.0e-77 292.4 425 46.8
FAN17G1809 Fragaria x ananassa HOM05D004568 ORTHO05D005343 1.6e-75 287.3 425 50.1
FAN07G0048 Fragaria x ananassa HOM05D004568 ORTHO05D005343 3.6e-75 286.2 419 48.7
FAN12G0798 Fragaria x ananassa HOM05D004568 ORTHO05D005343 2.3e-74 283.5 426 46.2
FvH4_4g28580 Fragaria vesca HOM05D004568 ORTHO05D005343 3.0e-74 283.1 427 47.8
FAN22G1274 Fragaria x ananassa HOM05D004568 ORTHO05D005343 6.7e-74 282.0 427 47.5
Glyma.02G128700 Glycine max HOM05D004568 ORTHO05D005343 3.3e-73 279.6 428 45.3
Phvul.003G034500 Phaseolus vulgaris HOM05D004568 ORTHO05D005343 9.7e-73 278.1 341 48.4
Hma1.2p1_1424F.1_g282720 Hydrangea macrophylla HOM05D004568 ORTHO05D005343 2.4e-71 273.5 377 45.1
Glyma.04G152800 Glycine max HOM05D004568 ORTHO05D005343 2.9e-69 266.5 433 44.3
TWI31G1373 Tripterygium wilfordii HOM05D004568 ORTHO05D005343 3.8e-69 266.2 380 46.3
MD16G1057700 Malus domestica HOM05D004568 ORTHO05D005343 5.0e-69 265.8 421 42.5
Dinv16554 Davidia involucrata HOM05D004568 ORTHO05D005343 3.6e-67 259.6 379 48.0
PGR119G0824 Punica granatum HOM05D004568 ORTHO05D005343 6.7e-66 255.4 444 47.1
Ca_05120_v3 Cicer arietinum L. HOM05D004568 ORTHO05D005343 2.2e-64 250.4 411 44.3
Eucgr.G02393 Eucalyptus grandis HOM05D004568 ORTHO05D005343 3.1e-63 246.5 454 44.1
TPR.G2653 Trifolium pratense HOM05D004568 ORTHO05D005343 3.1e-63 246.5 409 47.9
Gohir.D13G217400 Gossypium hirsutum HOM05D004568 ORTHO05D005343 5.3e-63 245.7 406 49.3
Gorai.013G247900 Gossypium raimondii HOM05D004568 ORTHO05D005343 5.3e-63 245.7 406 49.3
Gohir.A12G157850 Gossypium hirsutum HOM05D004568 ORTHO05D005343 2.6e-62 243.4 373 45.3
Gohir.A12G157951 Gossypium hirsutum HOM05D004568 ORTHO05D005343 2.6e-62 243.4 373 45.3
Gorai.008G173800 Gossypium raimondii HOM05D004568 ORTHO05D005343 4.5e-62 242.7 373 49.3
Gohir.D12G160800 Gossypium hirsutum HOM05D004568 ORTHO05D005343 5.9e-62 242.3 376 45.2
Hma1.2p1_1459F.1_g284900 Hydrangea macrophylla HOM05D004568 ORTHO05D005343 7.7e-62 241.9 395 41.0
CSS0002717 Camellia sinensis var. sinensis HOM05D004568 ORTHO05D005343 7.2e-60 235.3 377 45.4
Medtr6g472100 Medicago truncatula HOM05D004568 ORTHO05D005343 6.1e-59 232.3 399 47.9
Dinv27412 Davidia involucrata HOM05D006650 ORTHO05D008401 2.3e-58 230.3 276 49.3
Haze_11818 Corylus avellana HOM05D004568 ORTHO05D005343 3.0e-58 229.9 246 52.0
Gohir.A13G213600 Gossypium hirsutum HOM05D004568 ORTHO05D005343 3.7e-56 223.0 401 48.4
TAR374G1393 Trochodendron aralioides HOM05D004568 ORTHO05D005343 1.8e-55 220.7 393 39.9
Sc04g0007050 Simmondsia chinensis HOM05D004568 ORTHO05D005343 1.2e-54 218.0 388 37.4
Oeu033529.1 Olea europaea HOM05D004568 ORTHO05D005343 1.6e-54 217.6 389 39.1
Nitab4.5_0004681g0010 Nicotiana tabacum HOM05D004568 ORTHO05D005343 2.6e-54 216.9 410 38.8
Peaxi162Scf00208g00131 Petunia axillaris HOM05D004568 ORTHO05D005343 7.7e-54 215.3 401 38.9
CSS0045744 Camellia sinensis var. sinensis HOM05D004568 ORTHO05D005343 5.0e-53 212.6 363 44.9
GSVIVG01012027001 Vitis vinifera HOM05D004568 ORTHO05D005343 5.0e-53 212.6 233 53.2
Nitab4.5_0001554g0060 Nicotiana tabacum HOM05D004568 ORTHO05D005343 1.1e-52 211.5 409 37.2
Nn3g17622 Nelumbo nucifera HOM05D004568 ORTHO05D005343 2.1e-51 207.2 374 39.0
Psat2g096280 Pisum sativum HOM05D004568 ORTHO05D005343 2.7e-51 206.8 401 45.4
DCAR_026699 Daucus carota HOM05D004568 ORTHO05D005343 1.5e-49 201.1 395 39.2
SalBow8G3235 Salvia bowleyana HOM05D004568 ORTHO05D005343 1.4e-47 194.5 366 38.0
SalBow8G5572 Salvia bowleyana HOM05D004568 ORTHO05D005343 1.4e-47 194.5 366 38.0
Rhsim09G0116100 Rhododendron simsii HOM05D004568 ORTHO05D005343 5.4e-47 192.6 375 41.6
Migut.L01125 Erythranthe guttata HOM05D004568 ORTHO05D005343 1.3e-45 188.0 397 36.0
Rhsim09G0116400 Rhododendron simsii HOM05D004568 ORTHO05D005343 1.3e-45 188.0 376 41.5
arahy.Tifrunner.gnm1.ann1.35X7C5 Arachis hypogaea HOM05D004568 ORTHO05D005343 6.5e-45 185.7 428 36.7
THA.LOC104824044 Tarenaya hassleriana HOM05D004568 ORTHO05D005343 2.5e-44 183.7 485 37.9
PGSC0003DMG400002843 Solanum tuberosum HOM05D004568 ORTHO05D005343 9.4e-44 181.8 363 41.6
PSO063G5818 Papaver somniferum HOM05D004568 ORTHO05D005343 2.1e-43 180.6 392 39.8
PSO782G5402 Papaver somniferum HOM05D004568 ORTHO05D005343 2.1e-43 180.6 389 38.8
THA.LOC104805234 Tarenaya hassleriana HOM05D004568 ORTHO05D005343 2.1e-43 180.6 482 38.4
Solyc04g005920.1 Solanum lycopersicum HOM05D004568 ORTHO05D005343 2.7e-43 180.3 369 39.6
Sopen04g001970 Solanum pennellii HOM05D004568 ORTHO05D005343 6.1e-43 179.1 369 39.3
Actinidia37881 Actinidia chinensis HOM05D004568 ORTHO05D005343 4.9e-40 169.5 271 41.7
Lsat_1_v5_gn_3_58841 Lactuca sativa HOM05D004568 ORTHO05D005343 1.4e-39 167.9 394 38.8
Aa31LG2G6720 Aethionema arabicum HOM05D004568 ORTHO05D005343 4.5e-38 162.9 482 36.3
Aqoxy3G03818 Aquilegia oxysepala HOM05D004568 ORTHO05D005343 6.6e-37 159.1 418 37.8
BolC2t11302H Brassica oleracea HOM05D004568 ORTHO05D005343 3.3e-36 156.8 426 38.0
arahy.Tifrunner.gnm1.ann1.Y3DNXR Arachis hypogaea HOM05D004568 ORTHO05D005343 4.2e-36 156.4 425 33.4
Cc11_g11080 Coffea canephora HOM05D004568 ORTHO05D005343 1.2e-35 154.8 391 32.2
ECA246G3306 Erigeron canadensis HOM05D004568 ORTHO05D005343 4.7e-35 152.9 396 39.1
DCAR_030135 Daucus carota HOM05D004568 ORTHO05D005343 8.0e-35 152.1 365 34.2
BcaC03g17273 Brassica carinata HOM05D004568 ORTHO05D005343 1.4e-34 151.4 406 38.2
A09p24900 Brassica napus HOM05D004568 ORTHO05D005343 2.3e-34 150.6 401 34.7
HanXRQChr12g0365221 Helianthus annuus HOM05D004568 ORTHO05D005343 8.9e-34 148.7 390 32.3
TAR622G0675 Trochodendron aralioides HOM05D004568 ORTHO05D005343 8.9e-34 148.7 392 32.9
HanXRQChr17g0551111 Helianthus annuus HOM05D004568 ORTHO05D005343 2.0e-33 147.5 396 36.4
HanXRQChr17g0551511 Helianthus annuus HOM05D004568 ORTHO05D005343 2.0e-33 147.5 396 36.4
BolC9t56047H Brassica oleracea HOM05D004568 ORTHO05D005343 3.7e-32 143.3 426 36.4
AUR62007782 Chenopodium quinoa HOM05D004568 ORTHO05D005343 8.3e-32 142.1 402 32.8
AUR62039200 Chenopodium quinoa HOM05D004568 ORTHO05D005343 8.3e-32 142.1 420 32.1
A06p42720 Brassica napus HOM05D004568 ORTHO05D005343 1.4e-31 141.4 430 34.4
BraA02t08408Z Brassica rapa HOM05D004568 ORTHO05D005343 1.4e-31 141.4 426 39.0
C09p31920 Brassica napus HOM05D004568 ORTHO05D005343 1.8e-31 141.0 426 36.2
EL10Ac6g14584 Beta vulgaris HOM05D004568 ORTHO05D005343 2.4e-31 140.6 382 35.1
BolC7t43969H Brassica oleracea HOM05D004568 ORTHO05D005343 2.4e-31 140.6 435 35.6
C07p34410 Brassica napus HOM05D004568 ORTHO05D005343 1.2e-30 138.3 435 35.6
BraA06t27185Z Brassica rapa HOM05D004568 ORTHO05D005343 1.2e-30 138.3 430 33.5
Thhalv10004268m.g Eutrema salsugineum HOM05D004568 ORTHO05D005343 1.2e-30 138.3 469 32.6
BcaC06g33977 Brassica carinata HOM05D004568 ORTHO05D005343 1.6e-30 137.9 435 35.4
SGA_v2.0_scaffold16G07859 Striga asiatica HOM05D004568 ORTHO05D005343 2.0e-30 137.5 378 33.9
vmacro10495 Vaccinium macrocarpon HOM05D004568 ORTHO05D005343 2.0e-30 137.5 350 39.7
AT3G25590 Arabidopsis thaliana HOM05D004568 ORTHO05D005343 2.7e-30 137.1 471 32.9
BcaB07g30266 Brassica carinata HOM05D004568 ORTHO05D005343 7.8e-30 135.6 430 33.5
SGA_v2.0_scaffold36G14507 Striga asiatica HOM05D004568 ORTHO05D005343 2.3e-29 134.0 172 43.6
HanXRQChr08g0214641 Helianthus annuus HOM05D004568 ORTHO05D005343 5.0e-29 132.9 399 33.8
HanXRQChr08g0214671 Helianthus annuus HOM05D004568 ORTHO05D005343 5.0e-29 132.9 399 33.8
C02p52170 Brassica napus HOM05D004568 ORTHO05D005343 1.9e-28 131.0 388 37.4
BcaC04g21427 Brassica carinata HOM05D004568 ORTHO05D005343 9.5e-28 128.6 386 36.3
Ah.04g164810 Amaranthus hybridus HOM05D004568 ORTHO05D005343 1.0e-26 125.2 363 33.6
unitig_747.g21193 Utricularia gibba HOM05D004568 ORTHO05D005343 3.1e-26 123.6 373 30.0
Lsat_1_v5_gn_8_37860 Lactuca sativa HOM05D004568 ORTHO05D005343 4.0e-26 123.2 404 33.2
AUR62019434 Chenopodium quinoa HOM05D000052 ORTHO05D000046 5.2e-26 122.9 284 35.2
AL5G14100 Arabidopsis lyrata HOM05D004568 ORTHO05D005343 2.0e-25 120.9 457 34.1
PGSC0003DMG400007516 Solanum tuberosum HOM05D004568 ORTHO05D005343 2.6e-25 120.6 373 32.7
Sp2g14860 Schrenkiella parvula HOM05D004568 ORTHO05D005343 7.5e-25 119.0 426 33.3
Lj3P1023T52 Lonicera japonica HOM05D004568 ORTHO05D005343 1.3e-24 118.2 229 39.3
BcaC04g21428 Brassica carinata HOM05D004568 ORTHO05D005343 1.1e-23 115.2 291 34.7
Haze_11819 Corylus avellana HOM05D004568 ORTHO05D005343 1.1e-23 115.2 79 73.4
A02p33910 Brassica napus HOM05D004568 ORTHO05D005343 3.2e-23 113.6 407 38.3
Nitab4.5_0012448g0010 Nicotiana tabacum HOM05D004568 ORTHO05D005343 1.6e-22 111.3 252 39.7
Solyc05g010450.1 Solanum lycopersicum HOM05D004568 ORTHO05D005343 6.0e-22 109.4 301 34.6
Sopen05g006240 Solanum pennellii HOM05D004568 ORTHO05D005343 6.0e-22 109.4 301 34.6
Carub.0005s0337 Capsella rubella HOM05D004568 ORTHO05D005343 1.7e-21 107.8 452 28.5
BcaB07g30637 Brassica carinata HOM05D004568 ORTHO05D005343 9.5e-20 102.1 437 35.2
BraA09t38078Z Brassica rapa HOM05D004568 ORTHO05D005343 2.1e-19 100.9 196 40.3
BcaC06g31131 Brassica carinata HOM05D004568 ORTHO05D005343 2.6e-17 94.0 452 31.9
CDE04G2972 Ceratophyllum demersum HOM05D004568 ORTHO05D005343 4.4e-17 93.2 189 32.8
ECA233G1390 Erigeron canadensis HOM05D004568 ORTHO05D005343 6.4e-16 89.4 276 30.8
unitig_26.g10277 Utricularia gibba HOM05D004568 ORTHO05D005343 1.1e-12 78.6 169 34.9
Haze_07821 Corylus avellana HOM05D004568 ORTHO05D005343 9.5e-12 75.5 63 65.1
Haze_13037 Corylus avellana HOM05D004568 ORTHO05D005343 1.2e-11 75.1 74 52.7
Ah.06g195100 Amaranthus hybridus HOM05D004568 ORTHO05D005343 2.1e-11 74.3 409 24.4
Actinidia30170 Actinidia chinensis HOM05D004568 ORTHO05D005343 6.2e-11 72.8 52 69.2
Hma1.2p1_0337F.1_g129430 Hydrangea macrophylla HOM05D004568 ORTHO05D005343 2.2e-08 64.3 111 38.7
SEGI_17788 Sequoiadendron giganteum HOM05D004568 ORTHO05D005343 2.2e-08 64.3 77 44.2
unitig_699.g19898 Utricularia gibba HOM05D004568 ORTHO05D005343 2.4e-07 60.8 117 34.2
CDE04G2720 Ceratophyllum demersum HOM05D004568 ORTHO05D005343 6.0e-06 56.2 111 41.4


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