Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.14G094300 Manihot esculenta HOM05D006650 ORTHO05D008401 6.5e-160 567.4 297 100.0
Ciclev10032286m.g Citrus clementina HOM05D006650 ORTHO05D008401 8.7e-104 380.9 301 71.4
Atru.chr11.1444 Acer truncatum HOM05D006650 ORTHO05D008401 4.3e-103 378.6 297 70.7
Potri.T046554 Populus trichocarpa HOM05D006650 ORTHO05D008401 6.9e-101 371.3 306 68.0
Potri.008G109700 Populus trichocarpa HOM05D006650 ORTHO05D008401 9.9e-100 367.5 308 67.2
Sabra08G0083500 Salix brachista HOM05D006650 ORTHO05D008401 2.4e-98 362.8 306 66.7
TWI75G1831 Tripterygium wilfordii HOM05D006650 ORTHO05D008401 1.2e-97 360.5 300 67.7
Cfa008806 Carpinus fangiana HOM05D006650 ORTHO05D008401 1.6e-94 350.1 297 66.7
Prupe.1G299800 Prunus persica HOM05D006650 ORTHO05D008401 1.8e-93 346.7 303 65.7
Duzib248G0229 Durio zibethinus HOM05D006650 ORTHO05D008401 7.1e-90 334.7 298 65.1
QL03p046578 Quercus lobata HOM05D006650 ORTHO05D008401 7.1e-90 334.7 286 64.7
MD13G1052300 Malus domestica HOM05D006650 ORTHO05D008401 9.3e-90 334.3 298 63.1
Ca_04377_v3 Cicer arietinum L. HOM05D006650 ORTHO05D008401 2.7e-89 332.8 306 63.4
COL.COLO4_27715 Corchorus olitorius HOM05D006650 ORTHO05D008401 2.7e-89 332.8 307 62.2
Psat1g085040 Pisum sativum HOM05D006650 ORTHO05D008401 4.6e-89 332.0 305 62.0
Phvul.003G034600 Phaseolus vulgaris HOM05D006650 ORTHO05D008401 7.9e-89 331.3 276 67.4
RcHm_v2.0_Chr4g0436681 Rosa chinensis HOM05D006650 ORTHO05D008401 7.9e-89 331.3 285 64.2
Aqoxy3G03817 Aquilegia oxysepala HOM05D006650 ORTHO05D008401 1.0e-88 330.9 309 60.2
THA.LOC104821976 Tarenaya hassleriana HOM05D006650 ORTHO05D008401 1.0e-88 330.9 301 62.1
CiPaw.05G118400 Carya illinoinensis HOM05D006650 ORTHO05D008401 1.3e-88 330.5 297 63.3
Dinv27412 Davidia involucrata HOM05D006650 ORTHO05D008401 1.8e-88 330.1 238 73.1
Thhalv10008392m.g Eutrema salsugineum HOM05D006650 ORTHO05D008401 1.8e-88 330.1 298 62.8
FAN17G3038 Fragaria x ananassa HOM05D006650 ORTHO05D008401 3.0e-88 329.3 297 61.3
FAN07G0603 Fragaria x ananassa HOM05D006650 ORTHO05D008401 5.1e-88 328.6 298 62.1
ClCG08G004790 Citrullus lanatus HOM05D006650 ORTHO05D008401 8.7e-88 327.8 294 62.2
Hma1.2p1_1424F.1_g282740 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 2.5e-87 326.2 214 79.0
Lj2g0026821 Lotus japonicus HOM05D006650 ORTHO05D008401 4.3e-87 325.5 310 60.6
CARHR025730 Cardamine hirsuta HOM05D006650 ORTHO05D008401 5.6e-87 325.1 300 62.3
CANSAT64G2403 Cannabis sativa HOM05D006650 ORTHO05D008401 1.3e-86 323.9 233 72.1
Glyma.02G128500 Glycine max HOM05D006650 ORTHO05D008401 1.6e-86 323.6 297 61.3
Medtr6g021510 Medicago truncatula HOM05D006650 ORTHO05D008401 1.6e-86 323.6 300 61.0
AL1G39570 Arabidopsis lyrata HOM05D006650 ORTHO05D008401 8.1e-86 321.2 301 61.8
CsaV3_6G003950 Cucumis sativus L. HOM05D006650 ORTHO05D008401 1.1e-85 320.9 249 67.5
Carub.0001s2478 Capsella rubella HOM05D006650 ORTHO05D008401 1.4e-85 320.5 298 61.7
Rhsim09G0116700 Rhododendron simsii HOM05D006650 ORTHO05D008401 1.4e-85 320.5 306 60.5
Rhsim09G0116200 Rhododendron simsii HOM05D006650 ORTHO05D008401 3.1e-85 319.3 306 61.8
Sp1g22480 Schrenkiella parvula HOM05D006650 ORTHO05D008401 5.3e-85 318.5 306 59.8
Thecc.02G315100 Theobroma cacao HOM05D006650 ORTHO05D008401 9.0e-85 317.8 299 63.9
arahy.Tifrunner.gnm1.ann1.1PS8SX Arachis hypogaea HOM05D006650 ORTHO05D008401 1.5e-84 317.0 271 63.8
Gohir.A04G144800 Gossypium hirsutum HOM05D006650 ORTHO05D008401 1.5e-84 317.0 301 61.5
Gorai.012G184600 Gossypium raimondii HOM05D006650 ORTHO05D008401 9.9e-84 314.3 301 61.5
Sed0026335 Sechium edule HOM05D006650 ORTHO05D008401 9.9e-84 314.3 264 64.4
arahy.Tifrunner.gnm1.ann1.P12GZY Arachis hypogaea HOM05D006650 ORTHO05D008401 1.7e-83 313.5 273 63.7
MELO3C011665.2 Cucumis melo HOM05D006650 ORTHO05D008401 1.7e-83 313.5 254 66.1
TPR.G21643 Trifolium pratense HOM05D006650 ORTHO05D008401 1.7e-83 313.5 304 58.9
PGR119G1187 Punica granatum HOM05D006650 ORTHO05D008401 2.9e-83 312.8 285 61.8
ATR0691G055 Amborella trichopoda HOM05D006650 ORTHO05D008401 4.9e-83 312.0 215 74.4
BolC3t19565H Brassica oleracea HOM05D006650 ORTHO05D008401 4.9e-83 312.0 298 60.4
Lalb_Chr10g0099501 Lupinus albus HOM05D006650 ORTHO05D008401 8.4e-83 311.2 289 61.2
Nitab4.5_0000259g0270 Nicotiana tabacum HOM05D006650 ORTHO05D008401 5.5e-82 308.5 301 58.5
Gohir.D04G189300 Gossypium hirsutum HOM05D006650 ORTHO05D008401 2.1e-81 306.6 301 60.8
Actinidia32425 Actinidia chinensis HOM05D006650 ORTHO05D008401 2.7e-81 306.2 258 66.3
FAN12G1321 Fragaria x ananassa HOM05D006650 ORTHO05D008401 2.7e-81 306.2 304 59.5
Nitab4.5_0008828g0010 Nicotiana tabacum HOM05D006650 ORTHO05D008401 4.6e-81 305.4 301 57.8
PSO063G6309 Papaver somniferum HOM05D006650 ORTHO05D008401 1.3e-80 303.9 255 67.5
Cc11_g11090 Coffea canephora HOM05D006650 ORTHO05D008401 5.1e-80 302.0 303 56.8
GSVIVG01012028001 Vitis vinifera HOM05D006650 ORTHO05D008401 8.7e-80 301.2 193 79.8
C03p72670 Brassica napus HOM05D006650 ORTHO05D008401 7.4e-79 298.1 322 55.9
CAN.G184.36 Capsicum annuum HOM05D006650 ORTHO05D008401 2.1e-78 296.6 300 56.3
PSO782G4155 Papaver somniferum HOM05D006650 ORTHO05D008401 2.1e-78 296.6 307 59.3
Sopen05g006230 Solanum pennellii HOM05D006650 ORTHO05D008401 2.1e-78 296.6 300 57.0
DCAR_023721 Daucus carota HOM05D006650 ORTHO05D008401 8.2e-78 294.7 261 62.5
MSTRG.800 Avicennia marina HOM05D006650 ORTHO05D008401 1.5e-76 290.4 301 56.5
HanXRQChr15g0475871 Helianthus annuus HOM05D006650 ORTHO05D008401 6.5e-75 285.0 303 53.5
ECA246G1261 Erigeron canadensis HOM05D006650 ORTHO05D008401 2.5e-74 283.1 248 61.7
FAN22G1912 Fragaria x ananassa HOM05D006650 ORTHO05D008401 2.5e-74 283.1 344 52.3
Os02g0326000 Oryza sativa ssp. japonica HOM05D006650 ORTHO05D008401 1.2e-73 280.8 215 67.9
Migut.L01126 Erythranthe guttata HOM05D006650 ORTHO05D008401 4.6e-73 278.9 306 53.9
Oeu054561.2 Olea europaea HOM05D006650 ORTHO05D008401 1.0e-72 277.7 307 54.1
TAR371G1079 Trochodendron aralioides HOM05D006650 ORTHO05D008401 6.7e-72 275.0 275 58.9
TAR371G0285 Trochodendron aralioides HOM05D006650 ORTHO05D008401 8.7e-72 274.6 275 58.5
FvH4_4g28590 Fragaria vesca HOM05D006650 ORTHO05D008401 2.5e-71 273.1 258 60.1
Dinv16555 Davidia involucrata HOM05D006650 ORTHO05D008401 1.6e-70 270.4 175 78.9
Zm00001eb379060 Zea mays HOM05D006650 ORTHO05D008401 8.2e-70 268.1 207 67.1
CSS0028658 Camellia sinensis var. sinensis HOM05D006650 ORTHO05D008401 4.1e-69 265.8 189 74.6
VMungo1215G2545 Vigna mungo HOM05D006650 ORTHO05D008401 9.0e-69 264.6 227 64.3
unitig_22.g6887 Utricularia gibba HOM05D006650 ORTHO05D008401 1.3e-67 260.8 273 51.3
Hma1.2p1_1424F.1_g282730 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 1.7e-67 260.4 305 54.8
Sc11g0002870 Simmondsia chinensis HOM05D006650 ORTHO05D008401 1.7e-67 260.4 264 56.1
Aa31LG7G8830 Aethionema arabicum HOM05D006650 ORTHO05D008401 5.0e-67 258.8 222 62.6
BraA08t34664Z Brassica rapa HOM05D006650 ORTHO05D008401 6.5e-67 258.5 262 56.1
Hma1.2p1_1459F.1_g284910 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 2.5e-66 256.5 305 54.1
A08p27180 Brassica napus HOM05D006650 ORTHO05D008401 3.2e-66 256.1 262 55.7
Lsat_1_v5_gn_3_61200 Lactuca sativa HOM05D006650 ORTHO05D008401 3.2e-66 256.1 324 51.5
Pp3c15_17200 Physcomitrium patens HOM05D006650 ORTHO05D008401 4.2e-66 255.8 211 60.2
vmacro10492 Vaccinium macrocarpon HOM05D006650 ORTHO05D008401 7.2e-66 255.0 323 51.4
AagrBONN_evm.TU.Sc2ySwM_228.1783 Anthoceros agrestis HOM05D006650 ORTHO05D008401 9.4e-66 254.6 240 56.7
Atru.chr11.1474 Acer truncatum HOM05D006650 ORTHO05D008401 3.6e-65 252.7 184 73.9
Mapoly0001s0402 Marchantia polymorpha HOM05D006650 ORTHO05D008401 2.3e-64 250.0 218 58.7
Lj8A100G102 Lonicera japonica HOM05D006650 ORTHO05D008401 5.7e-63 245.4 389 44.7
MD16G1057600 Malus domestica HOM05D006650 ORTHO05D008401 1.2e-60 237.7 220 60.9
SMO239G0062 Selaginella moellendorffii HOM05D006650 ORTHO05D008401 7.7e-60 235.0 202 58.4
Peaxi162Scf00188g00428 Petunia axillaris HOM05D006650 ORTHO05D008401 1.0e-59 234.6 316 48.7
SalBow8G0131 Salvia bowleyana HOM05D006650 ORTHO05D008401 1.7e-59 233.8 269 51.7
DCAR_026698 Daucus carota HOM05D006650 ORTHO05D008401 6.1e-57 225.3 262 51.5
SGA_v2.0_scaffold16G07854 Striga asiatica HOM05D006650 ORTHO05D008401 7.9e-57 224.9 305 48.9
Ah.02g127370 Amaranthus hybridus HOM05D006650 ORTHO05D008401 6.7e-56 221.9 230 56.1
MBI15_g22709_MAGBIO Magnolia biondii HOM05D006650 ORTHO05D008401 2.2e-51 206.8 136 77.2
CDE02G2218 Ceratophyllum demersum HOM05D002187 ORTHO05D002243 2.9e-51 206.5 143 73.4
AUR62007783 Chenopodium quinoa HOM05D006650 ORTHO05D008401 1.4e-50 204.1 214 55.6
AUR62002977 Chenopodium quinoa HOM05D006650 ORTHO05D008401 7.2e-50 201.8 221 54.8
Haze_11820 Corylus avellana HOM05D006650 ORTHO05D008401 6.3e-46 188.7 185 59.5
AT1G26180 Arabidopsis thaliana HOM05D006650 ORTHO05D008401 4.1e-45 186.0 205 52.7
PGSC0003DMG400007519 Solanum tuberosum HOM05D006650 ORTHO05D008401 1.6e-44 184.1 205 53.2
CBR_g18672 Chara braunii HOM05D006650 ORTHO05D008401 6.5e-43 178.7 214 44.4
HPP92_021645 Vanilla planifolia HOM05D006650 ORTHO05D008401 1.5e-42 177.6 213 49.8
Nn4g23629 Nelumbo nucifera HOM05D006650 ORTHO05D008401 7.2e-42 175.3 193 57.0
EL10Ac6g14586 Beta vulgaris HOM05D006650 ORTHO05D008401 5.7e-39 165.6 262 43.5
Cpa.g.sc1.261 Carica papaya HOM05D006650 ORTHO05D008401 5.7e-39 165.6 178 54.5
AagrBONN_evm.TU.Sc2ySwM_228.1786 Anthoceros agrestis HOM05D006650 ORTHO05D008401 7.5e-39 165.2 143 57.3
CBR_g25761 Chara braunii HOM05D006650 ORTHO05D008401 1.0e-35 154.8 209 41.6
CARHR153660 Cardamine hirsuta HOM05D006650 ORTHO05D008401 8.5e-35 151.8 116 65.5
SalBow8G0120 Salvia bowleyana HOM05D006650 ORTHO05D008401 4.2e-34 149.4 284 39.4
Hund05792 Selenicereus undatus HOM05D006650 ORTHO05D008401 2.5e-26 123.6 138 52.9
MCO03G393 Micromonas commoda HOM05D006650 ORTHO05D008401 2.3e-24 117.1 178 37.6
Cre07.g340150 Chlamydomonas reinhardtii HOM05D006650 ORTHO05D008401 2.6e-23 113.6 187 37.4
PRCOL_00002951 Prasinoderma coloniale HOM05D006650 ORTHO05D008401 2.7e-20 103.6 192 34.9
TAR629G1747 Trochodendron aralioides HOM05D006650 ORTHO05D000624 1.5e-18 97.8 108 52.8
Sabra10G0102400 Salix brachista HOM05D006650 ORTHO05D008401 4.7e-17 92.8 109 53.2
Peaxi162Scf00004g02825 Petunia axillaris HOM05D006650 ORTHO05D008401 9.2e-13 78.6 70 62.9
Zm00001eb068230 Zea mays HOM05D000001 ORTHO05D000003 5.6e-10 69.3 53 62.3
Eucgr.G02394 Eucalyptus grandis HOM05D006650 ORTHO05D008401 1.2e-09 68.2 41 82.9


User provided reference genes

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