Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.14G090400 Manihot esculenta HOM05D008548 ORTHO05D010565 4.5e-74 281.2 142 100.0
Manes.06G079400 Manihot esculenta HOM05D008548 ORTHO05D010565 1.4e-48 196.4 138 75.4
Thecc.02G322600 Theobroma cacao HOM05D008548 ORTHO05D010565 1.0e-25 120.6 138 52.2
Potri.010G138001 Populus trichocarpa HOM05D008548 ORTHO05D010565 3.8e-25 118.6 144 48.6
Gohir.A13G088200 Gossypium hirsutum HOM05D008548 ORTHO05D010565 3.7e-20 102.1 137 46.7
Gohir.A03G106700 Gossypium hirsutum HOM05D008548 ORTHO05D010565 3.1e-19 99.0 121 47.1
Gohir.D13G085600 Gossypium hirsutum HOM05D008548 ORTHO05D010565 3.1e-19 99.0 138 44.9
Duzib251G0541 Durio zibethinus HOM05D008548 ORTHO05D010565 9.1e-19 97.4 140 45.0
Duzib248G0997 Durio zibethinus HOM05D008548 ORTHO05D010565 3.5e-18 95.5 137 44.5
VMungo1215G2679 Vigna mungo HOM05D008548 ORTHO05D010565 4.5e-18 95.1 148 41.9
Lj2g0005577 Lotus japonicus HOM05D008548 ORTHO05D010565 5.9e-18 94.7 149 40.9
Glyma.02G122800 Glycine max HOM05D008548 ORTHO05D010565 1.3e-17 93.6 143 40.6
Gorai.013G097500 Gossypium raimondii HOM05D008548 ORTHO05D010565 2.3e-17 92.8 138 44.2
CiPaw.06G095100 Carya illinoinensis HOM05D008548 ORTHO05D010565 2.9e-17 92.4 138 42.8
Gorai.005G147800 Gossypium raimondii HOM05D008548 ORTHO05D010565 2.9e-17 92.4 121 47.9
Phvul.003G038200 Phaseolus vulgaris HOM05D008548 ORTHO05D010565 1.5e-16 90.1 147 40.1
Sabra08G0084500 Salix brachista HOM05D008548 ORTHO05D010565 4.2e-16 88.6 125 42.4
Prupe.1G293600 Prunus persica HOM05D008548 ORTHO05D010565 7.2e-16 87.8 144 43.1
QL03p073326 Quercus lobata HOM05D008548 ORTHO05D010565 9.5e-16 87.4 139 45.3
Glyma.01G065000 Glycine max HOM05D008548 ORTHO05D010565 2.1e-15 86.3 147 41.5
Haze_11858 Corylus avellana HOM05D003025 ORTHO05D003305 4.7e-15 85.1 105 48.6
Ciclev10033730m.g Citrus clementina HOM05D008548 ORTHO05D010565 2.3e-14 82.8 138 41.3
Nn3g17542 Nelumbo nucifera HOM05D008548 ORTHO05D010565 8.9e-14 80.9 131 37.4
Rhsim09G0122000 Rhododendron simsii HOM05D008548 ORTHO05D010565 2.0e-13 79.7 142 37.3
CiPaw.05G121500 Carya illinoinensis HOM05D008548 ORTHO05D010565 3.4e-13 79.0 144 38.9
arahy.Tifrunner.gnm1.ann1.R5LUMW Arachis hypogaea HOM05D008548 ORTHO05D010565 4.4e-13 78.6 145 38.6
Lalb_Chr10g0099171 Lupinus albus HOM05D008548 ORTHO05D010565 1.7e-12 76.6 146 34.9
TWI79G1579 Tripterygium wilfordii HOM05D008548 ORTHO05D010565 2.2e-12 76.3 138 41.3
Cpa.g.sc1.170 Carica papaya HOM05D008548 ORTHO05D010565 2.8e-12 75.9 90 50.0
Aqoxy3G00550 Aquilegia oxysepala HOM05D008548 ORTHO05D010565 1.4e-11 73.6 90 47.8
TPR.G38502 Trifolium pratense HOM05D008548 ORTHO05D010565 1.4e-11 73.6 140 38.6
Medtr5g048090 Medicago truncatula HOM05D008548 ORTHO05D010565 2.4e-11 72.8 48 66.7
CANSAT64G1261 Cannabis sativa HOM05D008548 ORTHO05D010565 7.0e-11 71.2 147 38.1
PSO017G3531 Papaver somniferum HOM05D049557 ORTHO05D010565 7.0e-11 71.2 116 37.9
Rhsim12G0071200 Rhododendron simsii HOM05D008548 ORTHO05D010565 1.2e-10 70.5 149 42.3
Solyc05g011825.2 Solanum lycopersicum HOM05D008548 ORTHO05D010565 3.5e-10 68.9 95 43.2
PGR119G2115 Punica granatum HOM05D008548 ORTHO05D010565 5.9e-10 68.2 131 35.9
Cfa008850 Carpinus fangiana HOM05D004085 ORTHO05D005189 1.0e-09 67.4 93 46.2
vmacro01297 Vaccinium macrocarpon HOM05D008548 ORTHO05D010565 1.3e-09 67.0 59 57.6
arahy.Tifrunner.gnm1.ann1.BD088N Arachis hypogaea HOM05D008548 ORTHO05D010565 6.6e-09 64.7 65 46.2
arahy.Tifrunner.gnm1.ann1.Y4YZ09 Arachis hypogaea HOM05D008548 ORTHO05D010565 6.6e-09 64.7 65 46.2
PGSC0003DMG400019660 Solanum tuberosum HOM05D008548 ORTHO05D010565 1.5e-08 63.5 43 62.8
MD16G1055300 Malus domestica HOM05D008548 ORTHO05D010565 1.9e-08 63.2 132 38.6
FvH4_4g29280 Fragaria vesca HOM05D023608 ORTHO05D010565 2.5e-08 62.8 152 37.5
FAN12G2598 Fragaria x ananassa HOM05D023608 ORTHO05D010565 2.5e-08 62.8 152 37.5
ClCG05G023540 Citrullus lanatus HOM05D024428 ORTHO05D025076 4.3e-08 62.0 130 33.8
Sopen05g006580 Solanum pennellii HOM05D001549 ORTHO05D003098 4.3e-08 62.0 88 40.9
DCAR_026688 Daucus carota HOM05D008548 ORTHO05D010565 5.6e-08 61.6 50 62.0
Peaxi162Scf00188g01031 Petunia axillaris HOM05D008548 ORTHO05D010565 7.3e-08 61.2 32 81.2
FAN17G1069 Fragaria x ananassa HOM05D023608 ORTHO05D010565 9.5e-08 60.8 149 36.9
Psat2g090800 Pisum sativum HOM05D008548 ORTHO05D010565 9.5e-08 60.8 132 31.8
Sed0002945 Sechium edule HOM05D024428 ORTHO05D025076 2.1e-07 59.7 130 34.6
MD13G1056400 Malus domestica HOM05D008548 ORTHO05D010565 2.8e-07 59.3 149 35.6
SGA_v2.0_scaffold287G47189 Striga asiatica HOM05D003025 ORTHO05D003305 2.8e-07 59.3 133 30.8
Lsat_1_v5_gn_3_104501 Lactuca sativa HOM05D008548 ORTHO05D010565 4.7e-07 58.5 63 49.2
FAN22G1173 Fragaria x ananassa HOM05D023608 ORTHO05D010565 4.0e-06 55.5 152 35.5
SalBow2G1954 Salvia bowleyana HOM05D008548 ORTHO05D010565 5.2e-06 55.1 136 28.7


User provided reference genes

Program Settings