Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.14G089000 Manihot esculenta HOM05D007687 ORTHO05D009692 2.3e-159 565.5 273 100.0
QL10p020735 Quercus lobata HOM05D007687 ORTHO05D009692 5.4e-60 235.3 280 46.4
Thecc.03G108300 Theobroma cacao HOM05D007687 ORTHO05D009692 1.3e-58 230.7 278 48.9
Potri.015G048600 Populus trichocarpa HOM05D007687 ORTHO05D009692 9.5e-57 224.6 284 47.5
Manes.06G080900 Manihot esculenta HOM05D007687 ORTHO05D009692 2.8e-56 223.0 230 56.1
Duzib068G1012 Durio zibethinus HOM05D007687 ORTHO05D009692 2.6e-54 216.5 279 46.2
Duzib205G1319 Durio zibethinus HOM05D007687 ORTHO05D009692 4.6e-51 205.7 279 45.9
Duzib084G0111 Durio zibethinus HOM05D007687 ORTHO05D009692 1.7e-50 203.8 279 44.4
COL.COLO4_27494 Corchorus olitorius HOM05D000180 ORTHO05D009692 3.4e-46 189.5 306 44.1
Sed0010577 Sechium edule HOM05D007687 ORTHO05D009692 2.9e-45 186.4 290 41.4
Sabra15G0078700 Salix brachista HOM05D007687 ORTHO05D009692 6.0e-43 178.7 291 40.5
Prupe.5G209900 Prunus persica HOM05D007687 ORTHO05D009692 1.3e-42 177.6 282 39.7
Nitab4.5_0002467g0050 Nicotiana tabacum HOM05D007687 ORTHO05D009692 5.6e-41 172.2 283 38.2
CAN.G982.38 Capsicum annuum HOM05D007687 ORTHO05D009692 1.6e-40 170.6 286 36.7
MD14G1216500 Malus domestica HOM05D007687 ORTHO05D009692 8.1e-40 168.3 338 35.8
TWI60G1328 Tripterygium wilfordii HOM05D007687 ORTHO05D009692 2.4e-39 166.8 239 41.4
TAR629G0229 Trochodendron aralioides HOM05D007687 ORTHO05D009692 3.1e-39 166.4 277 38.6
Peaxi162Scf00017g03282 Petunia axillaris HOM05D007687 ORTHO05D009692 1.6e-35 154.1 283 35.7
CiPaw.15G114100 Carya illinoinensis HOM05D007687 ORTHO05D009692 1.3e-34 151.0 254 39.4
Solyc03g114770.3 Solanum lycopersicum HOM05D007687 ORTHO05D009692 3.0e-34 149.8 289 33.2
Nitab4.5_0005994g0030 Nicotiana tabacum HOM05D007687 ORTHO05D009692 7.3e-33 145.2 275 33.5
Oeu044771.1 Olea europaea HOM05D007687 ORTHO05D009692 7.3e-33 145.2 286 37.1
Sopen03g033850 Solanum pennellii HOM05D007687 ORTHO05D009692 1.3e-32 144.4 290 32.4
Ciclev10024235m.g Citrus clementina HOM05D007687 ORTHO05D009692 2.4e-31 140.2 269 34.2
Actinidia10442 Actinidia chinensis HOM05D007687 ORTHO05D009692 9.0e-31 138.3 278 34.9
FvH4_5g13402 Fragaria vesca HOM05D007687 ORTHO05D009692 3.8e-29 132.9 308 34.1
FAN18G0959 Fragaria x ananassa HOM05D007687 ORTHO05D009692 3.8e-29 132.9 308 34.1
Atru.chr4.1593 Acer truncatum HOM05D007687 ORTHO05D009692 3.2e-28 129.8 237 40.1
ClCG04G011570 Citrullus lanatus HOM05D007687 ORTHO05D009692 3.5e-27 126.3 241 34.4
Gohir.A09G243800 Gossypium hirsutum HOM05D007687 ORTHO05D009692 1.0e-26 124.8 266 34.2
Nn4g23535 Nelumbo nucifera HOM05D007687 ORTHO05D009692 2.3e-26 123.6 279 33.0
FAN08G0723 Fragaria x ananassa HOM05D007687 ORTHO05D009692 3.0e-26 123.2 308 34.4
Gorai.006G268500 Gossypium raimondii HOM05D007687 ORTHO05D009692 9.6e-25 118.2 266 33.8
Medtr2g461550 Medicago truncatula HOM05D007687 ORTHO05D009692 1.1e-23 114.8 231 37.2
Lj5A137T61 Lonicera japonica HOM05D007687 ORTHO05D009692 3.1e-23 113.2 236 33.5
Thhalv10004801m.g Eutrema salsugineum HOM05D007687 ORTHO05D009692 4.0e-23 112.8 284 33.1
AL8G37500 Arabidopsis lyrata HOM05D007687 ORTHO05D009692 5.3e-23 112.5 286 32.5
AT5G60880 Arabidopsis thaliana HOM05D007687 ORTHO05D009692 6.9e-23 112.1 284 31.3
Dinv07975 Davidia involucrata HOM05D007687 ORTHO05D009692 1.2e-22 111.3 167 38.3
Lj4g0013896 Lotus japonicus HOM05D007687 ORTHO05D009692 2.0e-22 110.5 276 30.4
Glyma.17G081600 Glycine max HOM05D007687 ORTHO05D009692 2.6e-22 110.2 265 33.6
PGSC0003DMG400024621 Solanum tuberosum HOM05D007687 ORTHO05D009692 2.6e-22 110.2 243 33.3
BraA03t13781Z Brassica rapa HOM05D007687 ORTHO05D009692 3.8e-21 106.3 286 32.2
BcaNung02611 Brassica carinata HOM05D007687 ORTHO05D009692 4.9e-21 105.9 280 32.5
C07p44640 Brassica napus HOM05D007687 ORTHO05D009692 4.9e-21 105.9 280 32.5
CsaV3_1G006250 Cucumis sativus L. HOM05D007687 ORTHO05D009692 8.4e-21 105.1 262 30.9
Cfa016835 Carpinus fangiana HOM05D007687 ORTHO05D009692 1.9e-20 104.0 210 33.3
FAN13G2354 Fragaria x ananassa HOM05D007687 ORTHO05D009692 2.5e-20 103.6 269 33.1
Cc04_g08290 Coffea canephora HOM05D007687 ORTHO05D009692 4.2e-20 102.8 281 31.7
BolC7t44987H Brassica oleracea HOM05D007687 ORTHO05D009692 5.5e-20 102.4 282 31.6
Sp2g24190 Schrenkiella parvula HOM05D007687 ORTHO05D009692 5.5e-20 102.4 285 32.3
Cpa.g.sc3.233 Carica papaya HOM05D007687 ORTHO05D009692 7.1e-20 102.1 213 35.7
A03p46570 Brassica napus HOM05D007687 ORTHO05D009692 1.6e-19 100.9 285 30.5
BcaC06g33202 Brassica carinata HOM05D007687 ORTHO05D009692 7.9e-19 98.6 287 31.4
VMungo1215G2041 Vigna mungo HOM05D007687 ORTHO05D009692 7.9e-19 98.6 265 33.6
CARHR274560 Cardamine hirsuta HOM05D007687 ORTHO05D009692 1.1e-17 94.7 286 32.5
Dinv17458 Davidia involucrata HOM05D007687 ORTHO05D009692 3.3e-17 93.2 147 38.8
Medtr4g109950 Medicago truncatula HOM05D007687 ORTHO05D009692 3.3e-17 93.2 187 35.3
Glyma.05G018400 Glycine max HOM05D007687 ORTHO05D009692 5.7e-17 92.4 251 32.3
Ca_21756_v3 Cicer arietinum L. HOM05D007687 ORTHO05D009692 1.3e-16 91.3 188 36.2
Phvul.003G182300 Phaseolus vulgaris HOM05D007687 ORTHO05D009692 1.3e-16 91.3 256 29.3
CANSAT56G0292 Cannabis sativa HOM05D007687 ORTHO05D009692 1.6e-16 90.9 187 33.2
CANSAT56G1485 Cannabis sativa HOM05D007687 ORTHO05D009692 1.6e-16 90.9 187 33.2
Haze_19876 Corylus avellana HOM05D007687 ORTHO05D009692 8.2e-16 88.6 175 35.4
Gohir.D09G244500 Gossypium hirsutum HOM05D007687 ORTHO05D009692 4.1e-15 86.3 169 32.5
Gorai.006G268600 Gossypium raimondii HOM05D007687 ORTHO05D009692 6.9e-15 85.5 288 28.8
Thhalv10015806m.g Eutrema salsugineum HOM05D007687 ORTHO05D009692 1.2e-14 84.7 280 31.1
BcaC04g23476 Brassica carinata HOM05D007687 ORTHO05D009692 7.6e-14 82.0 278 29.1
Gohir.D09G244550 Gossypium hirsutum HOM05D007687 ORTHO05D009692 7.6e-14 82.0 277 28.2
BolC9t53708H Brassica oleracea HOM05D007687 ORTHO05D009692 1.0e-13 81.6 278 28.8
BraA09t36360Z Brassica rapa HOM05D007687 ORTHO05D009692 1.3e-13 81.3 278 29.5
Rhsim01G0212900 Rhododendron simsii HOM05D006174 ORTHO05D007987 1.3e-13 81.3 248 28.6
TPR.G7811 Trifolium pratense HOM05D007687 ORTHO05D009692 1.3e-13 81.3 258 30.6
BcaB04g19894 Brassica carinata HOM05D007687 ORTHO05D009692 1.7e-13 80.9 277 28.2
THA.LOC104801051 Tarenaya hassleriana HOM05D007687 ORTHO05D009692 1.7e-13 80.9 285 27.7
Aa31LG11G2410 Aethionema arabicum HOM05D007687 ORTHO05D009692 3.8e-13 79.7 172 37.8
A09p07100 Brassica napus HOM05D007687 ORTHO05D009692 5.0e-13 79.3 281 29.2
C09p07960 Brassica napus HOM05D007687 ORTHO05D009692 6.5e-13 79.0 286 28.3
Carub.0008s2158 Capsella rubella HOM05D007687 ORTHO05D009692 6.5e-13 79.0 283 27.9
unitig_578.g15936 Utricularia gibba HOM05D007687 ORTHO05D009692 4.2e-12 76.3 254 26.0
SGA_v2.0_scaffold105G30431 Striga asiatica HOM05D007687 ORTHO05D009692 5.5e-12 75.9 275 28.0
Haze_18510 Corylus avellana HOM05D007687 ORTHO05D009692 1.8e-10 70.9 172 32.6
PGR031G0897 Punica granatum HOM05D007687 ORTHO05D009692 2.3e-10 70.5 235 29.4
unitig_8.g4497 Utricularia gibba HOM05D007687 ORTHO05D009692 6.7e-10 68.9 251 29.5
MELO3C002053.2 Cucumis melo HOM05D007687 ORTHO05D009692 8.7e-10 68.6 187 29.9
Aqoxy7G00617 Aquilegia oxysepala HOM05D035011 ORTHO05D031291 5.7e-09 65.9 161 33.5
CDE10G0250 Ceratophyllum demersum HOM05D007687 ORTHO05D009692 4.8e-08 62.8 209 30.6
Actinidia04796 Actinidia chinensis HOM05D007687 ORTHO05D009692 1.1e-07 61.6 115 37.4
Psat1g126320 Pisum sativum HOM05D007687 ORTHO05D009692 1.8e-07 60.8 206 31.6
Lsat_1_v5_gn_4_113740 Lactuca sativa HOM05D007687 ORTHO05D009692 5.3e-07 59.3 276 27.5


User provided reference genes

Program Settings