Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.14G084550 Manihot esculenta HOM05D006748 ORTHO05D008553 1.2e-40 169.5 88 100.0
Manes.06G086100 Manihot esculenta HOM05D006748 ORTHO05D008553 1.3e-36 156.0 87 88.5
Potri.015G056300 Populus trichocarpa HOM05D006748 ORTHO05D008553 1.4e-33 146.0 87 81.6
TAR622G0828 Trochodendron aralioides HOM05D006748 ORTHO05D008553 2.4e-33 145.2 87 79.3
Dinv10524 Davidia involucrata HOM05D006748 ORTHO05D008553 3.1e-33 144.8 87 81.6
Gohir.A12G181700 Gossypium hirsutum HOM05D006748 ORTHO05D008553 1.2e-32 142.9 87 80.5
Gohir.D12G184500 Gossypium hirsutum HOM05D006748 ORTHO05D008553 1.2e-32 142.9 87 80.5
Gorai.008G197900 Gossypium raimondii HOM05D006748 ORTHO05D008553 1.2e-32 142.9 87 80.5
Thecc.03G099400 Theobroma cacao HOM05D006748 ORTHO05D008553 3.4e-32 141.4 87 80.5
Duzib084G0059 Durio zibethinus HOM05D006748 ORTHO05D008553 5.8e-32 140.6 87 80.5
Lalb_Chr09g0334301 Lupinus albus HOM05D006748 ORTHO05D008553 9.9e-32 139.8 80 83.8
Ca_18978_v3 Cicer arietinum L. HOM05D006748 ORTHO05D008553 1.3e-31 139.4 80 82.5
Psat5g203080 Pisum sativum HOM05D006748 ORTHO05D008553 1.3e-31 139.4 80 82.5
Cfa019312 Carpinus fangiana HOM05D006748 ORTHO05D008553 1.7e-31 139.0 87 79.3
Hma1.2p1_0060F.1_g033230 Hydrangea macrophylla HOM05D006748 ORTHO05D008553 1.7e-31 139.0 88 79.5
Lalb_Chr16g0391551 Lupinus albus HOM05D006748 ORTHO05D008553 1.7e-31 139.0 80 83.8
Atru.chr9.414 Acer truncatum HOM05D006748 ORTHO05D008553 2.9e-31 138.3 87 80.5
Potri.012G065500 Populus trichocarpa HOM05D006748 ORTHO05D008553 2.9e-31 138.3 87 75.9
GSVIVG01007891001 Vitis vinifera HOM05D006748 ORTHO05D008553 2.9e-31 138.3 87 74.7
TPR.G12215 Trifolium pratense HOM05D006748 ORTHO05D008553 3.8e-31 137.9 80 81.2
CiPaw.12G007800 Carya illinoinensis HOM05D006748 ORTHO05D008553 4.9e-31 137.5 87 80.5
Nn3g17423 Nelumbo nucifera HOM05D006748 ORTHO05D008553 4.9e-31 137.5 87 78.2
Actinidia35032 Actinidia chinensis HOM05D006748 ORTHO05D008553 6.4e-31 137.1 88 79.5
Haze_07696 Corylus avellana HOM05D006748 ORTHO05D008553 6.4e-31 137.1 87 77.0
Aqoxy3G03609 Aquilegia oxysepala HOM05D006748 ORTHO05D008553 8.4e-31 136.7 87 75.9
Lj1g0012744 Lotus japonicus HOM05D006748 ORTHO05D008553 1.4e-30 136.0 80 82.5
ClCG06G015720 Citrullus lanatus HOM05D006748 ORTHO05D008553 1.9e-30 135.6 80 82.5
Glyma.06G201800 Glycine max HOM05D006748 ORTHO05D008553 1.9e-30 135.6 80 81.2
Eucgr.K02517 Eucalyptus grandis HOM05D006748 ORTHO05D008553 2.5e-30 135.2 83 79.5
PSO541G5074 Papaver somniferum HOM05D006748 ORTHO05D008553 2.5e-30 135.2 87 74.7
PSO675G4773 Papaver somniferum HOM05D006748 ORTHO05D008553 2.5e-30 135.2 87 74.7
Actinidia19003 Actinidia chinensis HOM05D006748 ORTHO05D008553 3.2e-30 134.8 86 80.2
CsaV3_1G002810 Cucumis sativus L. HOM05D006748 ORTHO05D008553 4.2e-30 134.4 80 82.5
Phvul.009G193300 Phaseolus vulgaris HOM05D006748 ORTHO05D008553 4.2e-30 134.4 80 80.0
vmacro16507 Vaccinium macrocarpon HOM05D006748 ORTHO05D008553 4.2e-30 134.4 89 77.5
Sc12g0006600 Simmondsia chinensis HOM05D006748 ORTHO05D008553 5.5e-30 134.0 87 80.5
THA.LOC104818341 Tarenaya hassleriana HOM05D006748 ORTHO05D008553 5.5e-30 134.0 87 77.0
VMungo1309G2295 Vigna mungo HOM05D006748 ORTHO05D008553 5.5e-30 134.0 80 80.0
Medtr3g024170 Medicago truncatula HOM05D006748 ORTHO05D008553 9.3e-30 133.3 80 78.8
Medtr3g024190 Medicago truncatula HOM05D006748 ORTHO05D008553 9.3e-30 133.3 80 78.8
AT5G07960 Arabidopsis thaliana HOM05D006748 ORTHO05D008553 1.2e-29 132.9 87 73.6
arahy.Tifrunner.gnm1.ann1.HPW464 Arachis hypogaea HOM05D006748 ORTHO05D008553 1.2e-29 132.9 79 81.0
Ciclev10023002m.g Citrus clementina HOM05D006748 ORTHO05D008553 1.2e-29 132.9 87 77.0
Sed0010236 Sechium edule HOM05D006748 ORTHO05D008553 1.2e-29 132.9 80 80.0
Carub.0006s0686 Capsella rubella HOM05D006748 ORTHO05D008553 2.1e-29 132.1 87 74.7
Oeu008258.1 Olea europaea HOM05D006748 ORTHO05D008553 2.1e-29 132.1 80 78.8
QL10p019141 Quercus lobata HOM05D006748 ORTHO05D008553 2.1e-29 132.1 87 77.0
BcaB05g21592 Brassica carinata HOM05D006748 ORTHO05D008553 3.5e-29 131.3 87 73.6
Thhalv10015079m.g Eutrema salsugineum HOM05D006748 ORTHO05D008553 3.5e-29 131.3 87 74.7
FvH4_5g14060 Fragaria vesca HOM05D006748 ORTHO05D008553 3.5e-29 131.3 81 79.0
CSS0043022 Camellia sinensis var. sinensis HOM05D006748 ORTHO05D008553 4.6e-29 131.0 88 76.1
CARHR205230 Cardamine hirsuta HOM05D006748 ORTHO05D008553 4.6e-29 131.0 87 73.6
AL6G18300 Arabidopsis lyrata HOM05D006748 ORTHO05D008553 6.0e-29 130.6 87 73.6
FvH4_5g14160 Fragaria vesca HOM05D006748 ORTHO05D008553 6.0e-29 130.6 81 79.0
FAN13G1579 Fragaria x ananassa HOM05D006748 ORTHO05D008553 6.0e-29 130.6 81 79.0
QL09p026979 Quercus lobata HOM05D006748 ORTHO05D008553 6.0e-29 130.6 85 77.6
PGR044G1724 Punica granatum HOM05D006748 ORTHO05D008553 7.9e-29 130.2 81 77.8
BcaC03g13204 Brassica carinata HOM05D006748 ORTHO05D008553 1.0e-28 129.8 87 72.4
BcaC06g32512 Brassica carinata HOM05D006748 ORTHO05D008553 1.0e-28 129.8 87 73.6
C02p03380 Brassica napus HOM05D006748 ORTHO05D008553 1.0e-28 129.8 87 72.4
BolC2t06300H Brassica oleracea HOM05D006748 ORTHO05D008553 1.0e-28 129.8 87 72.4
Sp6g34980 Schrenkiella parvula HOM05D006748 ORTHO05D008553 1.3e-28 129.4 81 76.5
TWI81G0385 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 1.3e-28 129.4 87 74.7
Lj5A105G56 Lonicera japonica HOM05D006748 ORTHO05D008553 1.8e-28 129.0 87 73.6
BraA02t04939Z Brassica rapa HOM05D006748 ORTHO05D008553 2.3e-28 128.6 87 72.4
Cpa.g.sc94.24 Carica papaya HOM05D006748 ORTHO05D008553 2.3e-28 128.6 80 78.8
MD14G1210100 Malus domestica HOM05D006748 ORTHO05D008553 2.3e-28 128.6 80 78.8
C09p68960 Brassica napus HOM05D006748 ORTHO05D008553 3.0e-28 128.3 87 72.4
CANSAT80G2841 Cannabis sativa HOM05D006748 ORTHO05D008553 3.9e-28 127.9 87 74.7
RcHm_v2.0_Chr7g0182761 Rosa chinensis HOM05D006748 ORTHO05D008553 3.9e-28 127.9 81 74.1
Hund09880 Selenicereus undatus HOM05D006748 ORTHO05D008553 3.9e-28 127.9 87 72.4
Sed0016176 Sechium edule HOM05D006748 ORTHO05D008553 5.1e-28 127.5 80 77.5
TWI60G0647 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 5.1e-28 127.5 87 72.4
HPP92_019473 Vanilla planifolia HOM05D006748 ORTHO05D008553 8.7e-28 126.7 81 72.8
Migut.I00325 Erythranthe guttata HOM05D006748 ORTHO05D008553 1.1e-27 126.3 80 75.0
BolC9t59641H Brassica oleracea HOM05D006748 ORTHO05D008553 1.5e-27 125.9 87 72.4
Rhsim12G0151700 Rhododendron simsii HOM05D006748 ORTHO05D008553 1.9e-27 125.6 86 75.6
Aa31LG3G18570 Aethionema arabicum HOM05D006748 ORTHO05D008553 3.3e-27 124.8 87 71.3
MD06G1200600 Malus domestica HOM05D006748 ORTHO05D008553 4.3e-27 124.4 80 75.0
Cc10_g05660 Coffea canephora HOM05D006748 ORTHO05D008553 7.4e-27 123.6 87 70.1
Nitab4.5_0005160g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 7.4e-27 123.6 80 76.2
Nitab4.5_0011867g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 7.4e-27 123.6 80 76.2
Peaxi162Scf00702g00422 Petunia axillaris HOM05D006748 ORTHO05D008553 7.4e-27 123.6 80 75.0
MSTRG.22979 Avicennia marina HOM05D006748 ORTHO05D008553 9.6e-27 123.2 80 73.8
Solyc06g069520.3 Solanum lycopersicum HOM05D006748 ORTHO05D008553 2.1e-26 122.1 80 75.0
Sopen06g026810 Solanum pennellii HOM05D006748 ORTHO05D008553 2.1e-26 122.1 80 75.0
Zm00001eb057720 Zea mays HOM05D006748 ORTHO05D008553 6.2e-26 120.6 86 67.4
SGA_v2.0_scaffold25G10944 Striga asiatica HOM05D006748 ORTHO05D008553 8.2e-26 120.2 80 71.2
Hund02598 Selenicereus undatus HOM05D006748 ORTHO05D008553 1.8e-25 119.0 88 68.2
Os03g0756800 Oryza sativa ssp. japonica HOM05D006748 ORTHO05D008553 2.4e-25 118.6 79 69.6
HanXRQChr02g0044721 Helianthus annuus HOM05D006748 ORTHO05D008553 3.1e-25 118.2 75 76.0
Lsat_1_v5_gn_1_13560 Lactuca sativa HOM05D006748 ORTHO05D008553 4.0e-25 117.9 74 75.7
SHI30118 Sapria himalayana HOM05D006748 ORTHO05D008553 4.0e-25 117.9 71 76.1
SGA_v2.0_scaffold49G18162 Striga asiatica HOM05D006748 ORTHO05D008553 5.3e-25 117.5 80 70.0
unitig_750.g28509 Utricularia gibba HOM05D006748 ORTHO05D008553 6.9e-25 117.1 80 68.8
EL10Ac5g11112 Beta vulgaris HOM05D006748 ORTHO05D008553 1.2e-24 116.3 81 72.8
Sabra15G0081500 Salix brachista HOM05D006748 ORTHO05D008553 4.5e-24 114.4 87 69.0
SMO201G0125 Selaginella moellendorffii HOM05D006748 ORTHO05D008553 1.3e-23 112.8 74 70.3
ECA247G1600 Erigeron canadensis HOM05D006748 ORTHO05D008553 2.9e-23 111.7 75 72.0
ATR0064G062 Amborella trichopoda HOM05D006748 ORTHO05D008553 6.5e-23 110.5 79 65.8
HPP92_006054 Vanilla planifolia HOM05D006748 ORTHO05D008553 8.4e-23 110.2 78 65.4
AUR62008510 Chenopodium quinoa HOM05D006748 ORTHO05D008553 9.3e-22 106.7 81 66.7
AUR62021580 Chenopodium quinoa HOM05D006748 ORTHO05D008553 7.9e-21 103.6 78 67.9
Mapoly0019s0070 Marchantia polymorpha HOM05D006748 ORTHO05D008553 1.8e-20 102.4 73 65.8
CDE05G0122 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 3.9e-20 101.3 87 60.9
HanXRQChr16g0510351 Helianthus annuus HOM05D006748 ORTHO05D008553 4.3e-19 97.8 70 70.0
AagrBONN_evm.TU.Sc2ySwM_117.1931 Anthoceros agrestis HOM05D006748 ORTHO05D008553 2.4e-17 92.0 74 58.1
Pp3c14_26790 Physcomitrium patens HOM05D006748 ORTHO05D008553 2.4e-17 92.0 74 55.4
CBR_g90015 Chara braunii HOM05D006748 ORTHO05D008553 1.0e-15 86.7 82 51.2
COL.COLO4_37587 Corchorus olitorius HOM05D006748 ORTHO05D008553 3.2e-14 81.6 53 75.5
BraA10t44914Z Brassica rapa HOM05D006748 ORTHO05D008553 4.3e-11 71.2 37 83.8
A10p28650 Brassica napus HOM05D006748 ORTHO05D008553 3.1e-09 65.1 34 82.4
CDE02G4382 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 9.1e-09 63.5 53 58.5
MELO3C017217.2 Cucumis melo HOM05D006748 ORTHO05D008553 1.2e-08 63.2 35 80.0
SEGI_29622 Sequoiadendron giganteum HOM05D006748 ORTHO05D008553 3.4e-08 61.6 48 62.5
MCO16G157 Micromonas commoda HOM05D006748 ORTHO05D008553 8.5e-07 57.0 73 34.2


User provided reference genes

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