Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.14G084000 Manihot esculenta HOM05D006409 ORTHO05D008250 2.1e-201 705.7 397 100.0
Potri.015G048900 Populus trichocarpa HOM05D006409 ORTHO05D008250 4.5e-124 448.7 397 68.0
Ciclev10020474m.g Citrus clementina HOM05D006409 ORTHO05D008250 5.7e-119 431.8 388 62.9
Sabra15G0078400 Salix brachista HOM05D006409 ORTHO05D008250 2.9e-115 419.5 382 63.9
TAR629G2567 Trochodendron aralioides HOM05D006409 ORTHO05D008250 1.8e-112 410.2 403 59.3
QL10p018676 Quercus lobata HOM05D006409 ORTHO05D008250 7.5e-111 404.8 395 60.8
Dinv38786 Davidia involucrata HOM05D006409 ORTHO05D008250 1.3e-110 404.1 382 63.6
CiPaw.11G050000 Carya illinoinensis HOM05D006409 ORTHO05D008250 5.5e-106 388.7 388 61.9
Duzib084G0027 Durio zibethinus HOM05D006409 ORTHO05D008250 2.3e-104 383.3 398 59.0
Thecc.03G097200 Theobroma cacao HOM05D006409 ORTHO05D008250 3.4e-103 379.4 379 58.0
Prupe.5G201100 Prunus persica HOM05D006409 ORTHO05D008250 5.7e-103 378.6 402 58.2
MD14G1208800 Malus domestica HOM05D006409 ORTHO05D008250 3.2e-101 372.9 380 57.4
Cfa019299 Carpinus fangiana HOM05D006409 ORTHO05D008250 1.2e-100 370.9 395 58.2
FAN18G2755 Fragaria x ananassa HOM05D006409 ORTHO05D008250 5.9e-100 368.6 381 60.6
FAN13G1588 Fragaria x ananassa HOM05D006409 ORTHO05D008250 2.3e-99 366.7 380 60.8
GSVIVG01007923001 Vitis vinifera HOM05D006409 ORTHO05D008250 2.9e-99 366.3 402 58.0
Rhsim08G0148500 Rhododendron simsii HOM05D006409 ORTHO05D008250 2.8e-97 359.8 383 59.5
RcHm_v2.0_Chr7g0182601 Rosa chinensis HOM05D006409 ORTHO05D008250 1.8e-96 357.1 396 57.6
TWI81G1094 Tripterygium wilfordii HOM05D006409 ORTHO05D008250 1.1e-93 347.8 397 56.7
Aqoxy3G03581 Aquilegia oxysepala HOM05D006409 ORTHO05D008250 3.2e-93 346.3 388 53.4
Nitab4.5_0001961g0070 Nicotiana tabacum HOM05D006409 ORTHO05D008250 1.3e-91 340.9 390 52.6
Gohir.D12G183500 Gossypium hirsutum HOM05D006409 ORTHO05D008250 2.3e-91 340.1 388 55.9
CANSAT80G1113 Cannabis sativa HOM05D006409 ORTHO05D008250 6.6e-91 338.6 385 54.5
Lj4g0024886 Lotus japonicus HOM05D006409 ORTHO05D008250 1.2e-89 334.3 384 52.1
Gorai.008G196800 Gossypium raimondii HOM05D006409 ORTHO05D008250 3.6e-89 332.8 383 55.4
PGR083G0341 Punica granatum HOM05D006409 ORTHO05D008250 2.3e-88 330.1 365 57.3
Eucgr.B00571 Eucalyptus grandis HOM05D006409 ORTHO05D008250 1.7e-86 323.9 382 56.3
Cpa.g.sc94.9 Carica papaya HOM05D006409 ORTHO05D008250 2.2e-86 323.6 382 52.6
Atru.chr9.377 Acer truncatum HOM05D006409 ORTHO05D008250 2.9e-86 323.2 308 63.6
Haze_07680 Corylus avellana HOM05D006409 ORTHO05D008250 4.1e-85 319.3 320 61.9
Cc00_g02320 Coffea canephora HOM05D006409 ORTHO05D008250 5.4e-85 318.9 382 54.5
Oeu014392.1 Olea europaea HOM05D006409 ORTHO05D006262 7.1e-85 318.5 388 50.5
Glyma.05G022800 Glycine max HOM05D006409 ORTHO05D008250 2.7e-84 316.6 364 52.5
Nitab4.5_0005160g0050 Nicotiana tabacum HOM05D006409 ORTHO05D008250 3.5e-84 316.2 390 50.8
THA.LOC104818336 Tarenaya hassleriana HOM05D006409 ORTHO05D008250 4.6e-84 315.8 383 54.0
Gohir.A12G180800 Gossypium hirsutum HOM05D006409 ORTHO05D008250 1.7e-83 313.9 388 53.6
FAN08G0388 Fragaria x ananassa HOM05D006409 ORTHO05D008250 3.9e-83 312.8 381 55.6
Sopen12g016610 Solanum pennellii HOM05D006409 ORTHO05D008250 2.5e-82 310.1 382 49.0
FvH4_5g14277 Fragaria vesca HOM05D006409 ORTHO05D008250 5.6e-82 308.9 333 59.5
DCAR_026015 Daucus carota HOM05D006409 ORTHO05D008250 7.3e-82 308.5 384 49.2
Glyma.17G076800 Glycine max HOM05D006409 ORTHO05D008250 2.8e-81 306.6 385 50.1
COL.COLO4_22753 Corchorus olitorius HOM05D006409 ORTHO05D008250 1.1e-80 304.7 391 51.2
PGSC0003DMG400012806 Solanum tuberosum HOM05D006409 ORTHO05D008250 3.1e-80 303.1 415 46.0
Carub.0008s2186 Capsella rubella HOM05D006409 ORTHO05D008250 5.2e-80 302.4 387 47.5
MELO3C002015.2 Cucumis melo HOM05D006409 ORTHO05D008250 1.2e-79 301.2 381 51.7
AL8G37860 Arabidopsis lyrata HOM05D006409 ORTHO05D008250 5.8e-79 298.9 390 51.0
CsaV3_1G005860 Cucumis sativus L. HOM05D006409 ORTHO05D008250 1.3e-78 297.7 383 50.7
AL6G18220 Arabidopsis lyrata HOM05D006409 ORTHO05D008250 4.9e-78 295.8 383 50.7
Solyc12g036300.3 Solanum lycopersicum HOM05D006409 ORTHO05D008250 3.2e-77 293.1 384 47.4
arahy.Tifrunner.gnm1.ann1.PS4SMH Arachis hypogaea HOM05D006409 ORTHO05D008250 4.1e-77 292.7 379 48.5
arahy.Tifrunner.gnm1.ann1.4D2E4C Arachis hypogaea HOM05D006409 ORTHO05D008250 9.2e-77 291.6 379 49.1
Sp6g35060 Schrenkiella parvula HOM05D006409 ORTHO05D008250 1.2e-76 291.2 382 49.2
CANSAT80G0413 Cannabis sativa HOM05D006409 ORTHO05D008250 2.1e-76 290.4 350 55.4
VMungo1215G3198 Vigna mungo HOM05D006409 ORTHO05D008250 4.6e-76 289.3 355 51.0
AT5G07890 Arabidopsis thaliana HOM05D006409 ORTHO05D008250 1.7e-75 287.3 382 48.4
Nn4g23374 Nelumbo nucifera HOM05D006409 ORTHO05D008250 1.7e-75 287.3 404 47.3
PSO478G4763 Papaver somniferum HOM05D006409 ORTHO05D008250 1.7e-75 287.3 377 50.4
Lalb_Chr13g0302951 Lupinus albus HOM05D006409 ORTHO05D008250 1.9e-74 283.9 383 49.6
PSO302G0195 Papaver somniferum HOM05D006409 ORTHO05D008250 1.9e-74 283.9 374 47.6
CARHR205310 Cardamine hirsuta HOM05D006409 ORTHO05D008250 2.5e-74 283.5 384 46.9
ClCG04G011930 Citrullus lanatus HOM05D006409 ORTHO05D008250 2.5e-74 283.5 384 50.0
Phvul.L001604 Phaseolus vulgaris HOM05D006409 ORTHO05D008250 2.5e-74 283.5 339 51.3
Actinidia09250 Actinidia chinensis HOM05D006409 ORTHO05D008250 3.3e-74 283.1 354 49.2
PSO017G5610 Papaver somniferum HOM05D006409 ORTHO05D008250 4.3e-74 282.7 377 49.6
MSTRG.22971 Avicennia marina HOM05D006409 ORTHO05D008250 9.6e-74 281.6 383 46.0
TPR.G2042 Trifolium pratense HOM05D006409 ORTHO05D008250 2.1e-73 280.4 375 50.7
Peaxi162Scf00106g00081 Petunia axillaris HOM05D006409 ORTHO05D008250 1.1e-72 278.1 390 46.2
Lj5A105T60 Lonicera japonica HOM05D006409 ORTHO05D008250 1.4e-72 277.7 329 53.2
A10p28660 Brassica napus HOM05D006409 ORTHO05D008250 3.1e-72 276.6 382 49.7
Carub.0006s0678 Capsella rubella HOM05D006409 ORTHO05D008250 5.2e-72 275.8 368 50.5
BcaC06g32511 Brassica carinata HOM05D001913 ORTHO05D008250 1.2e-71 274.6 385 47.5
AT5G61200 Arabidopsis thaliana HOM05D006409 ORTHO05D008250 2.6e-71 273.5 383 48.8
C09p68980 Brassica napus HOM05D006409 ORTHO05D006405 4.4e-71 272.7 384 49.0
vmacro17591 Vaccinium macrocarpon HOM05D006409 ORTHO05D008250 7.6e-71 271.9 406 45.6
BolC9t59643H Brassica oleracea HOM05D006409 ORTHO05D008250 2.2e-70 270.4 383 47.8
BcaNung06903 Brassica carinata HOM05D006409 ORTHO05D008250 6.4e-70 268.9 385 50.6
BraA10t44915Z Brassica rapa HOM05D001913 ORTHO05D006405 1.9e-69 267.3 378 50.0
Thhalv10013673m.g Eutrema salsugineum HOM05D006409 ORTHO05D008250 9.3e-69 265.0 382 49.2
Actinidia04843 Actinidia chinensis HOM05D006409 ORTHO05D008250 1.2e-68 264.6 264 57.2
CAN.G172.10 Capsicum annuum HOM05D006409 ORTHO05D008250 1.2e-68 264.6 346 47.4
Medtr4g109330 Medicago truncatula HOM05D006409 ORTHO05D008250 4.6e-68 262.7 321 51.1
C03p03950 Brassica napus HOM05D006409 ORTHO05D008250 1.7e-67 260.8 389 46.3
BolC3t12932H Brassica oleracea HOM05D006409 ORTHO05D008250 1.7e-67 260.8 389 46.3
BcaB01g05645 Brassica carinata HOM05D006409 ORTHO05D008250 1.1e-66 258.1 385 46.5
Sed0008489 Sechium edule HOM05D006409 ORTHO05D008250 2.1e-65 253.8 384 47.7
Psat4g048440 Pisum sativum HOM05D006409 ORTHO05D008250 6.2e-65 252.3 324 48.1
A03p03510 Brassica napus HOM05D006409 ORTHO05D008250 1.1e-64 251.5 391 47.6
BraA03t09701Z Brassica rapa HOM05D006409 ORTHO05D008250 1.1e-64 251.5 391 47.6
AUR62021594 Chenopodium quinoa HOM05D006409 ORTHO05D008250 2.9e-62 243.4 352 49.7
ATR0064G033 Amborella trichopoda HOM05D006409 ORTHO05D008250 2.4e-61 240.4 397 41.6
Sc04g0003080 Simmondsia chinensis HOM05D006409 ORTHO05D008250 2.7e-60 236.9 384 45.8
HanXRQChr09g0270151 Helianthus annuus HOM05D006409 ORTHO05D008250 1.3e-57 228.0 383 42.0
SalBow5G3762 Salvia bowleyana HOM05D006409 ORTHO05D008250 1.3e-57 228.0 379 42.2
Migut.I00315 Erythranthe guttata HOM05D006409 ORTHO05D008250 2.1e-57 227.3 379 41.4
AUR62008498 Chenopodium quinoa HOM05D006409 ORTHO05D008250 5.8e-55 219.2 399 44.4
Ca_21789_v3 Cicer arietinum L. HOM05D006409 ORTHO05D008250 1.1e-53 214.9 322 46.0
ECA232G2526 Erigeron canadensis HOM05D006409 ORTHO05D008250 1.1e-53 214.9 383 43.6
CDE06G0998 Ceratophyllum demersum HOM05D006409 ORTHO05D008250 1.2e-52 211.5 352 38.9
Os07g0598700 Oryza sativa ssp. japonica HOM05D006409 ORTHO05D008250 1.9e-50 204.1 344 39.0
Zm00001eb108440 Zea mays HOM05D006409 ORTHO05D008250 4.0e-48 196.4 347 38.9
Hund02605 Selenicereus undatus HOM05D006409 ORTHO05D008250 6.9e-48 195.7 392 40.3
EL10Ac5g11100 Beta vulgaris HOM05D006409 ORTHO05D008250 7.9e-44 182.2 388 39.2
Ah.02g113920 Amaranthus hybridus HOM05D006409 ORTHO05D008250 7.4e-42 175.6 393 35.1
Duzib068G0538 Durio zibethinus HOM05D006409 ORTHO05D008250 1.7e-38 164.5 209 48.8
C04p51620 Brassica napus HOM05D006409 ORTHO05D008250 6.5e-38 162.5 281 43.1
BcaC02g08700 Brassica carinata HOM05D006409 ORTHO05D008250 5.5e-37 159.5 287 41.1
HanXRQChr16g0502261 Helianthus annuus HOM05D006409 ORTHO05D008250 9.3e-37 158.7 359 38.4
BcaC02g08698 Brassica carinata HOM05D006409 ORTHO05D008250 3.8e-30 136.7 293 38.9
Lsat_1_v5_gn_4_110201 Lactuca sativa HOM05D006409 ORTHO05D008250 8.8e-27 125.6 385 31.2
BcaC02g08699 Brassica carinata HOM05D006409 ORTHO05D008250 2.0e-23 114.4 235 39.1
SEGI_28191 Sequoiadendron giganteum HOM05D006409 ORTHO05D008250 3.4e-23 113.6 405 29.9
SEGI_37085 Sequoiadendron giganteum HOM05D006409 ORTHO05D008250 3.4e-23 113.6 405 29.9
Actinidia12838 Actinidia chinensis HOM05D006409 ORTHO05D008250 4.1e-16 90.1 91 59.3
SGA_v2.0_scaffold25G10967 Striga asiatica HOM05D006409 ORTHO05D008250 5.9e-15 86.3 347 28.8
arahy.Tifrunner.gnm1.ann1.LPT8KM Arachis hypogaea HOM05D006409 ORTHO05D008250 3.2e-13 80.5 73 58.9
C04p51590 Brassica napus HOM05D006409 ORTHO05D008250 1.2e-12 78.6 80 61.2
C04p51600 Brassica napus HOM05D006409 ORTHO05D008250 1.5e-10 71.6 80 52.5
Glyma.01G017150 Glycine max HOM05D006409 ORTHO05D008250 2.9e-06 57.4 108 36.1


User provided reference genes

Program Settings