Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.14G068400 Manihot esculenta HOM05D006711 ORTHO05D008104 3.3e-40 167.9 84 100.0
Potri.012G078000 Populus trichocarpa HOM05D006711 ORTHO05D008104 2.9e-36 154.8 84 90.5
Potri.015G073300 Populus trichocarpa HOM05D006711 ORTHO05D008104 2.9e-36 154.8 84 90.5
Sabra15G0097500 Salix brachista HOM05D006711 ORTHO05D008104 3.2e-35 151.4 84 86.9
Sabra12G0055800 Salix brachista HOM05D006711 ORTHO05D008104 1.6e-34 149.1 84 86.9
FvH4_5g05020 Fragaria vesca HOM05D006711 ORTHO05D008104 2.7e-34 148.3 82 89.0
FAN04G0211 Fragaria x ananassa HOM05D006711 ORTHO05D008104 2.7e-34 148.3 82 89.0
FAN08G2471 Fragaria x ananassa HOM05D006711 ORTHO05D008104 2.7e-34 148.3 82 89.0
FAN18G2156 Fragaria x ananassa HOM05D006711 ORTHO05D008104 2.7e-34 148.3 82 89.0
PGR044G2080 Punica granatum HOM05D006711 ORTHO05D008104 4.6e-34 147.5 82 89.0
Thecc.03G007500 Theobroma cacao HOM05D006711 ORTHO05D008104 4.6e-34 147.5 80 88.8
FAN13G1278 Fragaria x ananassa HOM05D006711 ORTHO05D008104 5.9e-34 147.1 82 87.8
FAN18G1479 Fragaria x ananassa HOM05D006711 ORTHO05D008104 5.9e-34 147.1 82 87.8
THA.LOC104821460 Tarenaya hassleriana HOM05D006711 ORTHO05D008104 1.0e-33 146.4 81 88.9
ClCG01G014050 Citrullus lanatus HOM05D006711 ORTHO05D008104 1.3e-33 146.0 82 85.4
Aa31LG4G16690 Aethionema arabicum HOM05D006711 ORTHO05D008104 3.0e-33 144.8 81 85.2
AL5G27360 Arabidopsis lyrata HOM05D006711 ORTHO05D008104 3.0e-33 144.8 81 85.2
CARHR156770 Cardamine hirsuta HOM05D006711 ORTHO05D008104 3.0e-33 144.8 81 85.2
COL.COLO4_24770 Corchorus olitorius HOM05D006711 ORTHO05D008104 3.0e-33 144.8 80 88.8
CsaV3_1G008300 Cucumis sativus L. HOM05D006711 ORTHO05D008104 3.0e-33 144.8 82 84.1
Gohir.D12G276600 Gossypium hirsutum HOM05D006711 ORTHO05D008104 3.0e-33 144.8 82 85.4
MD06G1177900 Malus domestica HOM05D006711 ORTHO05D008104 3.0e-33 144.8 84 84.5
Duzib068G0631 Durio zibethinus HOM05D006711 ORTHO05D008104 3.9e-33 144.4 80 87.5
Duzib084G0075 Durio zibethinus HOM05D006711 ORTHO05D008104 3.9e-33 144.4 82 85.4
Thhalv10010870m.g Eutrema salsugineum HOM05D006711 ORTHO05D008104 3.9e-33 144.4 81 84.0
Gohir.A12G275900 Gossypium hirsutum HOM05D006711 ORTHO05D008104 3.9e-33 144.4 82 85.4
Gorai.008G297100 Gossypium raimondii HOM05D006711 ORTHO05D008104 3.9e-33 144.4 82 85.4
THA.LOC104798980 Tarenaya hassleriana HOM05D000086 ORTHO05D008104 3.9e-33 144.4 81 86.4
Medtr4g106700 Medicago truncatula HOM05D006711 ORTHO05D008104 6.6e-33 143.7 81 85.2
Sp5g13950 Schrenkiella parvula HOM05D006711 ORTHO05D008104 6.6e-33 143.7 81 84.0
Cfa019085 Carpinus fangiana HOM05D006711 ORTHO05D008104 8.6e-33 143.3 80 87.5
MELO3C002246.2 Cucumis melo HOM05D006711 ORTHO05D008104 8.6e-33 143.3 82 82.9
MD14G1184500 Malus domestica HOM05D006711 ORTHO05D008104 1.1e-32 142.9 84 83.3
Prupe.5G177100 Prunus persica HOM05D006711 ORTHO05D008104 1.1e-32 142.9 84 84.5
Ca_21901_v3 Cicer arietinum L. HOM05D006711 ORTHO05D008104 2.5e-32 141.7 80 85.0
BcaC07g39289 Brassica carinata HOM05D006711 ORTHO05D008104 3.3e-32 141.4 81 84.0
A06p19610 Brassica napus HOM05D006711 ORTHO05D008104 3.3e-32 141.4 81 84.0
C08p22960 Brassica napus HOM05D006711 ORTHO05D008104 3.3e-32 141.4 81 84.0
BolC8t49933H Brassica oleracea HOM05D006711 ORTHO05D008104 3.3e-32 141.4 81 84.0
BraA06t25041Z Brassica rapa HOM05D006711 ORTHO05D008104 3.3e-32 141.4 81 84.0
Ciclev10023110m.g Citrus clementina HOM05D006711 ORTHO05D008104 4.3e-32 141.0 80 85.0
Aa31LG11G810 Aethionema arabicum HOM05D006711 ORTHO05D008104 5.6e-32 140.6 81 82.7
BcaB01g00848 Brassica carinata HOM05D006711 ORTHO05D008104 9.5e-32 139.8 81 82.7
TWI15G0492 Tripterygium wilfordii HOM05D006711 ORTHO05D008104 1.6e-31 139.0 76 89.5
Eucgr.K02867 Eucalyptus grandis HOM05D006711 ORTHO05D008104 2.8e-31 138.3 80 83.8
Sc04g0001970 Simmondsia chinensis HOM05D006711 ORTHO05D008104 3.6e-31 137.9 76 89.5
Cpa.g.sc134.10 Carica papaya HOM05D006711 ORTHO05D008104 4.7e-31 137.5 80 83.8
CiPaw.12G024900 Carya illinoinensis HOM05D006711 ORTHO05D008104 4.7e-31 137.5 92 76.1
Hund09419 Selenicereus undatus HOM05D006711 ORTHO05D008104 6.2e-31 137.1 77 89.6
Atru.chr9.2428 Acer truncatum HOM05D006711 ORTHO05D008104 1.1e-30 136.3 80 81.2
Sed0004980 Sechium edule HOM05D006711 ORTHO05D008104 2.3e-30 135.2 82 78.0
TPR.G37552 Trifolium pratense HOM05D006711 ORTHO05D008104 2.3e-30 135.2 81 81.5
Lj4g0001750 Lotus japonicus HOM05D006711 ORTHO05D008104 3.1e-30 134.8 79 82.3
Ah.10g035450 Amaranthus hybridus HOM05D006711 ORTHO05D008104 4.0e-30 134.4 77 85.7
Psat4g057240 Pisum sativum HOM05D006711 ORTHO05D008104 4.0e-30 134.4 81 79.0
AUR62031000 Chenopodium quinoa HOM05D006711 ORTHO05D008104 1.2e-29 132.9 77 84.4
arahy.Tifrunner.gnm1.ann1.5NY27E Arachis hypogaea HOM05D006711 ORTHO05D008104 1.5e-29 132.5 80 80.0
EL10Ac5g10797 Beta vulgaris HOM05D006711 ORTHO05D008104 5.8e-29 130.6 76 85.5
Glyma.05G035600 Glycine max HOM05D006711 ORTHO05D008104 9.8e-29 129.8 70 90.0
CANSAT11G1423 Cannabis sativa HOM05D006711 ORTHO05D008104 1.3e-28 129.4 80 76.2
Phvul.003G198200 Phaseolus vulgaris HOM05D006711 ORTHO05D008104 1.7e-28 129.0 79 83.5
PSO832G1815 Papaver somniferum HOM05D006711 ORTHO05D008104 2.2e-28 128.6 80 75.0
PSO478G1559 Papaver somniferum HOM05D006711 ORTHO05D008104 2.9e-28 128.3 84 76.2
vmacro05808 Vaccinium macrocarpon HOM05D006711 ORTHO05D008104 4.9e-28 127.5 76 84.2
PSO063G1690 Papaver somniferum HOM05D006711 ORTHO05D008104 8.3e-28 126.7 77 76.6
Aqoxy3G00948 Aquilegia oxysepala HOM05D006711 ORTHO05D008104 1.1e-27 126.3 77 83.1
Hma1.2p1_0697F.1_g204840 Hydrangea macrophylla HOM05D006711 ORTHO05D008104 1.4e-27 125.9 76 81.6
PSO017G6527 Papaver somniferum HOM05D006711 ORTHO05D008104 1.9e-27 125.6 83 75.9
SalBow6G5258 Salvia bowleyana HOM05D006711 ORTHO05D008104 1.9e-27 125.6 76 82.9
Oeu059193.1 Olea europaea HOM05D006711 ORTHO05D008104 4.1e-27 124.4 76 80.3
DCAR_011220 Daucus carota HOM05D006711 ORTHO05D008104 5.4e-27 124.0 76 80.3
MBI15_g24174_MAGBIO Magnolia biondii HOM05D006711 ORTHO05D008104 5.4e-27 124.0 69 89.9
Oeu047317.1 Olea europaea HOM05D006711 ORTHO05D008104 7.0e-27 123.6 76 80.3
GSVIVG01032507001 Vitis vinifera HOM05D006711 ORTHO05D008104 7.0e-27 123.6 76 77.6
CDE10G0118 Ceratophyllum demersum HOM05D001322 ORTHO05D001301 9.2e-27 123.2 79 78.5
Migut.N03365 Erythranthe guttata HOM05D006711 ORTHO05D008104 9.2e-27 123.2 76 80.3
CiPaw.11G029900 Carya illinoinensis HOM05D006711 ORTHO05D008104 1.6e-26 122.5 67 89.6
Cc07_g02450 Coffea canephora HOM05D006711 ORTHO05D008104 2.0e-26 122.1 76 81.6
Actinidia33966 Actinidia chinensis HOM05D006711 ORTHO05D008104 2.7e-26 121.7 76 78.9
GSVIVG01007800001 Vitis vinifera HOM05D006711 ORTHO05D008104 3.5e-26 121.3 69 85.5
ATR1149G012 Amborella trichopoda HOM05D006711 ORTHO05D008104 6.0e-26 120.6 74 83.8
CDE10G0426 Ceratophyllum demersum HOM05D006711 ORTHO05D008104 6.0e-26 120.6 72 79.2
Sed0016611 Sechium edule HOM05D006711 ORTHO05D008104 6.0e-26 120.6 82 72.0
HPP92_010905 Vanilla planifolia HOM05D006711 ORTHO05D008104 7.8e-26 120.2 76 77.6
HPP92_010907 Vanilla planifolia HOM05D006711 ORTHO05D008104 7.8e-26 120.2 76 77.6
AUR62008246 Chenopodium quinoa HOM05D001451 ORTHO05D008104 1.5e-24 115.9 68 83.8
HanXRQChr09g0265981 Helianthus annuus HOM05D006711 ORTHO05D008104 1.5e-24 115.9 71 81.7
Peaxi162Scf00429g00118 Petunia axillaris HOM05D006711 ORTHO05D008104 1.5e-24 115.9 77 71.4
Sopen11g029530 Solanum pennellii HOM05D006711 ORTHO05D008104 1.9e-24 115.5 77 71.4
QL10p013547 Quercus lobata HOM05D006711 ORTHO05D008104 4.3e-24 114.4 149 45.0
Lsat_1_v5_gn_4_181601 Lactuca sativa HOM05D006711 ORTHO05D008104 2.8e-23 111.7 71 78.9
unitig_46.g17997 Utricularia gibba HOM05D006711 ORTHO05D008104 2.8e-23 111.7 102 62.7
Oeu006591.3 Olea europaea HOM05D006711 ORTHO05D008104 3.6e-23 111.3 99 61.6
Nitab4.5_0002792g0010 Nicotiana tabacum HOM05D006711 ORTHO05D008104 4.7e-23 110.9 77 68.8
Carub.0005s1414 Capsella rubella HOM05D000086 ORTHO05D008104 1.4e-22 109.4 68 77.9
Nitab4.5_0004762g0010 Nicotiana tabacum HOM05D006711 ORTHO05D008104 1.4e-22 109.4 77 67.5
CAN.G742.33 Capsicum annuum HOM05D006711 ORTHO05D008104 1.8e-22 109.0 77 67.5
HanXRQChr12g0385511 Helianthus annuus HOM05D006711 ORTHO05D008104 3.1e-22 108.2 76 71.1
RcHm_v2.0_Chr7g0194021 Rosa chinensis HOM05D006711 ORTHO05D008104 5.2e-22 107.5 57 93.0
Zm00001eb311470 Zea mays HOM05D006711 ORTHO05D008104 6.8e-22 107.1 71 76.1
Lalb_Chr12g0201501 Lupinus albus HOM05D006711 ORTHO05D008104 2.6e-21 105.1 67 77.6
Os09g0375900 Oryza sativa ssp. japonica HOM05D006711 ORTHO05D008104 5.8e-21 104.0 64 79.7
Haze_07479 Corylus avellana HOM05D006711 ORTHO05D008104 1.3e-20 102.8 55 90.9
TAR622G0690 Trochodendron aralioides HOM05D001464 ORTHO05D002836 2.9e-20 101.7 61 80.3
Eucgr.J02179 Eucalyptus grandis HOM05D006711 ORTHO05D008104 6.4e-20 100.5 76 63.2
Nn4g22854 Nelumbo nucifera HOM05D006711 ORTHO05D008104 1.6e-18 95.9 60 78.3
PGSC0003DMG400003004 Solanum tuberosum HOM05D006711 ORTHO05D008104 1.6e-18 95.9 122 45.9
Rhsim10G0024900 Rhododendron simsii HOM05D006711 ORTHO05D008104 1.0e-17 93.2 151 41.1
Rhsim08G0056600 Rhododendron simsii HOM05D000086 ORTHO05D000983 3.9e-17 91.3 78 62.8
SEGI_30617 Sequoiadendron giganteum HOM05D006711 ORTHO05D008104 3.9e-17 91.3 69 63.8
Rhsim10G0024700 Rhododendron simsii HOM05D006711 ORTHO05D008104 3.3e-16 88.2 52 86.5
CSS0024346 Camellia sinensis var. sinensis HOM05D006711 ORTHO05D008104 5.6e-16 87.4 52 84.6
CBR_g49624 Chara braunii HOM05D006711 ORTHO05D008104 1.6e-15 85.9 65 66.2
Mapoly0124s0028 Marchantia polymorpha HOM05D006711 ORTHO05D008104 2.1e-15 85.5 73 63.0
ATR0820G148 Amborella trichopoda HOM05D006711 ORTHO05D008104 6.2e-15 84.0 75 62.7
ATR0661G003 Amborella trichopoda HOM05D006711 ORTHO05D008104 1.8e-14 82.4 68 66.2
Pp3c14_16830 Physcomitrium patens HOM05D006711 ORTHO05D008104 2.4e-14 82.0 72 56.9
AagrBONN_evm.TU.Sc2ySwM_368.1224 Anthoceros agrestis HOM05D006711 ORTHO05D008104 7.6e-13 77.0 62 66.1
Pp3c3_16770 Physcomitrium patens HOM05D006711 ORTHO05D008104 7.6e-13 77.0 62 67.7
PRCOL_00004863 Prasinoderma coloniale HOM05D006711 ORTHO05D008104 2.9e-12 75.1 73 53.4
Dinv35040 Davidia involucrata HOM05D006711 ORTHO05D008104 8.7e-09 63.5 39 84.6
HPP92_016979 Vanilla planifolia HOM05D006711 ORTHO05D008104 1.1e-08 63.2 35 91.4
Nn3g16941 Nelumbo nucifera HOM05D006711 ORTHO05D008104 3.6e-07 58.2 51 56.9
SHI34267 Sapria himalayana HOM05D006711 ORTHO05D008104 5.2e-06 54.3 34 82.4


User provided reference genes

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