Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.14G064200 Manihot esculenta HOM05D000922 ORTHO05D008200 1.8e-108 396.0 203 100.0
Nn3g16820 Nelumbo nucifera HOM05D000922 ORTHO05D008200 3.9e-87 325.1 203 82.3
COL.COLO4_30070 Corchorus olitorius HOM05D000922 ORTHO05D008200 5.0e-87 324.7 202 84.7
CSS0000249 Camellia sinensis var. sinensis HOM05D000922 ORTHO05D008200 8.6e-87 323.9 203 81.8
Potri.015G078600 Populus trichocarpa HOM05D000922 ORTHO05D008200 1.1e-86 323.6 194 84.0
DCAR_026150 Daucus carota HOM05D000922 ORTHO05D008200 1.9e-86 322.8 198 83.3
Rhsim08G0173800 Rhododendron simsii HOM05D000922 ORTHO05D007418 3.3e-86 322.0 201 82.6
TWI39G0231 Tripterygium wilfordii HOM05D000922 ORTHO05D008200 3.3e-86 322.0 199 82.9
Sabra15G0103100 Salix brachista HOM05D000922 ORTHO05D008200 4.3e-86 321.6 182 88.5
CAN.G1166.6 Capsicum annuum HOM05D000922 ORTHO05D008200 1.2e-85 320.1 202 80.2
Gohir.D09G167000 Gossypium hirsutum HOM05D000922 ORTHO05D008200 1.6e-85 319.7 202 82.2
Gorai.006G188800 Gossypium raimondii HOM05D000922 ORTHO05D008200 1.6e-85 319.7 202 82.2
Duzib205G0455 Durio zibethinus HOM05D000922 ORTHO05D008200 2.8e-85 318.9 188 86.7
Gohir.A09G171300 Gossypium hirsutum HOM05D000922 ORTHO05D008200 3.6e-85 318.5 202 81.7
QL10p010977 Quercus lobata HOM05D000922 ORTHO05D008200 3.6e-85 318.5 199 80.4
Thecc.03G014600 Theobroma cacao HOM05D000922 ORTHO05D008200 3.6e-85 318.5 198 84.3
Eucgr.G00068 Eucalyptus grandis HOM05D000922 ORTHO05D008200 4.7e-85 318.2 203 80.8
PGSC0003DMG400018154 Solanum tuberosum HOM05D000922 ORTHO05D008200 6.1e-85 317.8 200 82.0
arahy.Tifrunner.gnm1.ann1.RA2V7W Arachis hypogaea HOM05D000922 ORTHO05D008200 1.4e-84 316.6 203 81.8
Solyc03g112810.3 Solanum lycopersicum HOM05D000922 ORTHO05D008200 1.4e-84 316.6 195 82.6
CiPaw.11G024500 Carya illinoinensis HOM05D000922 ORTHO05D008200 2.3e-84 315.8 203 82.3
Dinv20636 Davidia involucrata HOM05D000922 ORTHO05D008200 4.0e-84 315.1 202 80.2
Glyma.17G088100 Glycine max HOM05D000922 ORTHO05D008200 4.0e-84 315.1 202 81.2
Prupe.5G171600 Prunus persica HOM05D000922 ORTHO05D008200 4.0e-84 315.1 203 82.3
VMungo1215G1163 Vigna mungo HOM05D000922 ORTHO05D008200 4.0e-84 315.1 195 82.6
ClCG01G013230 Citrullus lanatus HOM05D000922 ORTHO05D008200 5.2e-84 314.7 205 80.5
vmacro19401 Vaccinium macrocarpon HOM05D000922 ORTHO05D008200 5.2e-84 314.7 203 79.3
Nitab4.5_0000514g0030 Nicotiana tabacum HOM05D000922 ORTHO05D008200 1.5e-83 313.2 199 80.4
Nitab4.5_0008678g0030 Nicotiana tabacum HOM05D000922 ORTHO05D008200 1.5e-83 313.2 182 86.3
CsaV3_1G008590 Cucumis sativus L. HOM05D000922 ORTHO05D008200 2.6e-83 312.4 204 80.4
FAN18G2418 Fragaria x ananassa HOM05D000922 ORTHO05D008200 2.6e-83 312.4 199 81.4
FAN18G3465 Fragaria x ananassa HOM05D000922 ORTHO05D008200 2.6e-83 312.4 199 81.4
MELO3C002273.2 Cucumis melo HOM05D000922 ORTHO05D008200 4.4e-83 311.6 204 79.9
FAN04G0130 Fragaria x ananassa HOM05D000922 ORTHO05D008200 4.4e-83 311.6 199 80.9
MSTRG.11466 Avicennia marina HOM05D000922 ORTHO05D008200 5.8e-83 311.2 202 77.7
RcHm_v2.0_Chr7g0193351 Rosa chinensis HOM05D000922 ORTHO05D008200 5.8e-83 311.2 202 80.2
FAN13G3248 Fragaria x ananassa HOM05D000922 ORTHO05D008200 7.5e-83 310.8 199 80.9
Sopen03g031890 Solanum pennellii HOM05D000922 ORTHO05D008200 7.5e-83 310.8 181 85.6
FvH4_5g05480 Fragaria vesca HOM05D000922 ORTHO05D008200 1.3e-82 310.1 199 80.9
Atru.chr9.2496 Acer truncatum HOM05D000922 ORTHO05D008200 1.7e-82 309.7 203 79.3
Lj4g0019609 Lotus japonicus HOM05D000922 ORTHO05D008200 2.2e-82 309.3 202 77.7
Phvul.003G201800 Phaseolus vulgaris HOM05D000922 ORTHO05D008200 2.2e-82 309.3 193 81.3
GSVIVG01007722001 Vitis vinifera HOM05D000922 ORTHO05D008200 2.2e-82 309.3 203 79.8
MD06G1172200 Malus domestica HOM05D000922 ORTHO05D008200 3.7e-82 308.5 203 81.3
MD14G1178100 Malus domestica HOM05D000922 ORTHO05D008200 3.7e-82 308.5 199 81.9
Ciclev10022297m.g Citrus clementina HOM05D000922 ORTHO05D008200 6.4e-82 307.8 198 81.3
Sed0005243 Sechium edule HOM05D000922 ORTHO05D008200 6.4e-82 307.8 202 79.7
AUR62013091 Chenopodium quinoa HOM05D000922 ORTHO05D008200 1.4e-81 306.6 189 81.0
CANSAT80G0818 Cannabis sativa HOM05D000922 ORTHO05D008200 1.9e-81 306.2 196 80.6
TAR629G0323 Trochodendron aralioides HOM05D000922 ORTHO05D008200 2.4e-81 305.8 203 78.3
AL8G40030 Arabidopsis lyrata HOM05D000922 ORTHO05D008200 3.2e-81 305.4 200 77.0
Lj5C125T23 Lonicera japonica HOM05D000922 ORTHO05D008200 4.1e-81 305.1 203 78.3
Peaxi162Scf00089g01850 Petunia axillaris HOM05D000922 ORTHO05D008200 5.4e-81 304.7 205 79.0
Hund09449 Selenicereus undatus HOM05D000922 ORTHO05D008200 7.0e-81 304.3 203 78.3
AUR62010095 Chenopodium quinoa HOM05D000922 ORTHO05D008200 1.2e-80 303.5 189 80.4
Haze_07527 Corylus avellana HOM05D000922 ORTHO05D008200 2.0e-80 302.8 219 76.3
Lsat_1_v5_gn_5_15061 Lactuca sativa HOM05D000922 ORTHO05D008200 2.0e-80 302.8 200 77.0
Carub.0008s2371 Capsella rubella HOM05D000922 ORTHO05D008200 2.7e-80 302.4 200 76.0
SalBow1G6106 Salvia bowleyana HOM05D000922 ORTHO05D008200 2.7e-80 302.4 200 77.5
SalBow5G5253 Salvia bowleyana HOM05D000922 ORTHO05D008200 2.7e-80 302.4 200 77.5
THA.LOC104818216 Tarenaya hassleriana HOM05D000922 ORTHO05D008200 3.5e-80 302.0 200 77.0
Lalb_Chr12g0201661 Lupinus albus HOM05D000922 ORTHO05D008200 6.0e-80 301.2 203 76.4
AT5G63000 Arabidopsis thaliana HOM05D000922 ORTHO05D008200 7.8e-80 300.8 201 76.6
arahy.Tifrunner.gnm1.ann1.3C9G4H Arachis hypogaea HOM05D000922 ORTHO05D008200 1.0e-79 300.4 204 78.4
CARHR276810 Cardamine hirsuta HOM05D000922 ORTHO05D008200 1.0e-79 300.4 201 76.1
SGA_v2.0_scaffold90G27896 Striga asiatica HOM05D000922 ORTHO05D008200 1.3e-79 300.1 192 80.2
BcaC01g02547 Brassica carinata HOM05D000922 ORTHO05D008200 1.7e-79 299.7 201 76.1
C03p63610 Brassica napus HOM05D000922 ORTHO05D008200 1.7e-79 299.7 201 76.1
BolC3t18619H Brassica oleracea HOM05D000922 ORTHO05D008200 1.7e-79 299.7 201 76.1
BraA06t25925Z Brassica rapa HOM05D000922 ORTHO05D008200 1.7e-79 299.7 201 76.1
Thhalv10004944m.g Eutrema salsugineum HOM05D000922 ORTHO05D008200 2.3e-79 299.3 201 76.6
Ca_21935_v3 Cicer arietinum L. HOM05D000922 ORTHO05D008200 3.9e-79 298.5 202 75.7
arahy.Tifrunner.gnm1.ann1.R1G0J4 Arachis hypogaea HOM05D000922 ORTHO05D008200 5.0e-79 298.1 197 80.7
A06p29780 Brassica napus HOM05D000922 ORTHO05D008200 6.6e-79 297.7 201 75.6
ECA246G4361 Erigeron canadensis HOM05D000922 ORTHO05D008200 6.6e-79 297.7 196 77.6
Sp2g26130 Schrenkiella parvula HOM05D000922 ORTHO05D008200 6.6e-79 297.7 195 76.9
BcaB02g09714 Brassica carinata HOM05D000922 ORTHO05D008200 1.1e-78 297.0 202 75.7
FAN08G1692 Fragaria x ananassa HOM05D000922 ORTHO05D008200 7.3e-78 294.3 220 72.7
Cc04_g12150 Coffea canephora HOM05D000922 ORTHO05D008200 9.5e-78 293.9 203 74.9
Psat4g058400 Pisum sativum HOM05D000922 ORTHO05D008200 1.2e-77 293.5 201 73.6
unitig_0.g1435 Utricularia gibba HOM05D000922 ORTHO05D008200 1.2e-77 293.5 202 74.3
Aqoxy3G02881 Aquilegia oxysepala HOM05D000922 ORTHO05D008200 1.6e-77 293.1 195 76.9
Migut.O00114 Erythranthe guttata HOM05D000922 ORTHO05D008200 2.8e-77 292.4 194 75.3
PGR044G1577 Punica granatum HOM05D000922 ORTHO05D008200 2.8e-77 292.4 197 77.7
EL10Ac9g21439 Beta vulgaris HOM05D000922 ORTHO05D008200 6.2e-77 291.2 234 66.2
HPP92_011872 Vanilla planifolia HOM05D000922 ORTHO05D008200 2.3e-76 289.3 201 73.6
Actinidia04732 Actinidia chinensis HOM05D000922 ORTHO05D007418 1.5e-75 286.6 205 74.6
Aa31LG4G16810 Aethionema arabicum HOM05D002875 ORTHO05D003215 4.4e-75 285.0 183 77.0
Medtr4g105570 Medicago truncatula HOM05D000922 ORTHO05D008200 7.5e-75 284.3 204 72.1
MBI16_g39217_MAGBIO Magnolia biondii HOM05D000922 ORTHO05D008200 1.3e-74 283.5 223 68.6
PGR044G0925 Punica granatum HOM05D000922 ORTHO05D008200 5.4e-73 278.1 197 74.6
Zm00001eb332970 Zea mays HOM05D000922 ORTHO05D008200 3.5e-72 275.4 202 69.3
CDE07G1875 Ceratophyllum demersum HOM05D000922 ORTHO05D008200 1.0e-71 273.9 170 80.6
Os01g0271000 Oryza sativa ssp. japonica HOM05D000922 ORTHO05D008200 3.0e-71 272.3 185 76.2
arahy.Tifrunner.gnm1.ann1.HJA5XH Arachis hypogaea HOM05D000922 ORTHO05D008200 1.5e-70 270.0 239 63.6
PSO832G1073 Papaver somniferum HOM05D000922 ORTHO05D008200 3.3e-70 268.9 197 71.6
Sc04g0001730 Simmondsia chinensis HOM05D000922 ORTHO05D008200 1.2e-69 266.9 161 82.6
Dinv38572 Davidia involucrata HOM05D000922 ORTHO05D008200 3.6e-69 265.4 315 51.1
HanXRQChr05g0155781 Helianthus annuus HOM05D000922 ORTHO05D008200 1.3e-66 256.9 162 78.4
SHI38067 Sapria himalayana HOM05D000922 ORTHO05D008200 7.1e-65 251.1 191 68.6
Manes.05G195400 Manihot esculenta HOM05D000922 ORTHO05D008200 4.3e-62 241.9 134 89.6
ATR1091G108 Amborella trichopoda HOM05D000922 ORTHO05D008200 3.6e-61 238.8 155 78.7
Cfa019117 Carpinus fangiana HOM05D000922 ORTHO05D008200 1.1e-52 210.7 116 92.2
TAR371G0469 Trochodendron aralioides HOM05D000922 ORTHO05D008200 4.0e-52 208.8 130 80.8
arahy.Tifrunner.gnm1.ann1.UWQ2W3 Arachis hypogaea HOM05D000922 ORTHO05D008200 1.2e-51 207.2 133 79.7
arahy.Tifrunner.gnm1.ann1.PQAW0Q Arachis hypogaea HOM05D000922 ORTHO05D008200 2.2e-50 203.0 119 87.4
Oeu023435.1 Olea europaea HOM05D000922 ORTHO05D008200 5.4e-49 198.4 106 91.5
TPR.G37467 Trifolium pratense HOM05D000922 ORTHO05D008200 1.2e-48 197.2 130 78.5
EL10Ac5g12019 Beta vulgaris HOM05D000922 ORTHO05D008200 7.9e-48 194.5 128 75.0
SEGI_40590 Sequoiadendron giganteum HOM05D000922 ORTHO05D008200 1.6e-45 186.8 146 65.1
Glyma.05G038900 Glycine max HOM05D000922 ORTHO05D008200 2.4e-44 183.0 108 84.3
arahy.Tifrunner.gnm1.ann1.Q2CJ89 Arachis hypogaea HOM05D000922 ORTHO05D008200 1.1e-36 157.5 145 62.1
Peaxi162Scf00089g01839 Petunia axillaris HOM05D000922 ORTHO05D008200 5.3e-36 155.2 177 51.4
AagrBONN_evm.TU.Sc2ySwM_228.4800 Anthoceros agrestis HOM05D000922 ORTHO05D008200 4.9e-34 148.7 175 43.4
Mapoly0191s0008 Marchantia polymorpha HOM05D000922 ORTHO05D008200 2.5e-33 146.4 184 46.2
TPR.G11031 Trifolium pratense HOM05D000922 ORTHO05D008200 1.9e-30 136.7 89 74.2
SMO111G0048 Selaginella moellendorffii HOM05D000922 ORTHO05D008200 3.8e-26 122.5 138 47.8
Pp3c17_17380 Physcomitrium patens HOM05D000922 ORTHO05D008200 8.4e-26 121.3 184 40.8
arahy.Tifrunner.gnm1.ann1.JAVP2G Arachis hypogaea HOM05D000922 ORTHO05D008200 2.5e-25 119.8 132 53.8
Cpa.g.sc76.32 Carica papaya HOM05D000922 ORTHO05D008200 1.6e-24 117.1 212 41.0
CBR_g38960 Chara braunii HOM05D000922 ORTHO05D008200 1.6e-21 107.1 250 31.6
MCO04G383 Micromonas commoda HOM05D000922 ORTHO05D008200 4.5e-11 72.4 189 28.6
Medtr4g105580 Medicago truncatula HOM05D000922 ORTHO05D008200 2.2e-10 70.1 100 38.0
arahy.Tifrunner.gnm1.ann1.RUR1T0 Arachis hypogaea HOM05D000034 ORTHO05D000037 1.9e-09 67.0 49 71.4
SGA_v2.0_scaffold25G11050 Striga asiatica HOM05D000922 ORTHO05D403871 1.0e-07 61.2 33 87.9
SGA_v2.0_scaffold116G32233 Striga asiatica HOM05D000922 ORTHO05D008200 2.3e-07 60.1 36 77.8
TAR371G0726 Trochodendron aralioides HOM05D000922 ORTHO05D008200 8.8e-07 58.2 33 84.8


User provided reference genes

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