Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.14G063800 Manihot esculenta HOM05D005107 ORTHO05D006200 1.6e-172 609.4 308 100.0
Manes.06G107100 Manihot esculenta HOM05D005107 ORTHO05D006200 9.9e-119 430.6 306 75.5
Potri.015G079700 Populus trichocarpa HOM05D005107 ORTHO05D006200 1.2e-111 407.1 308 67.2
Potri.012G088600 Populus trichocarpa HOM05D005107 ORTHO05D006200 1.6e-105 386.7 308 66.9
Sabra12G0063800 Salix brachista HOM05D005107 ORTHO05D006200 1.2e-103 380.6 308 65.3
Sabra15G0104000 Salix brachista HOM05D005107 ORTHO05D006200 3.8e-102 375.6 319 62.7
Atru.chr9.2518 Acer truncatum HOM05D005107 ORTHO05D006200 1.4e-96 357.1 307 59.3
QL10p008945 Quercus lobata HOM05D005107 ORTHO05D006200 1.4e-96 357.1 310 61.3
GSVIVG01007704001 Vitis vinifera HOM05D005107 ORTHO05D006200 2.0e-95 353.2 307 59.9
Cpa.g.sc153.5 Carica papaya HOM05D005107 ORTHO05D006200 3.5e-92 342.4 309 57.6
CiPaw.11G023500 Carya illinoinensis HOM05D005107 ORTHO05D006200 3.9e-91 339.0 309 59.2
TWI23G1004 Tripterygium wilfordii HOM05D005107 ORTHO05D006200 1.9e-90 336.7 309 59.2
Haze_07542 Corylus avellana HOM05D005107 ORTHO05D006200 1.3e-89 334.0 285 61.4
Eucgr.B00249 Eucalyptus grandis HOM05D005107 ORTHO05D006200 8.2e-89 331.3 307 56.4
Thecc.03G018700 Theobroma cacao HOM05D005107 ORTHO05D006200 8.2e-89 331.3 309 56.6
Dinv20630 Davidia involucrata HOM05D005107 ORTHO05D006200 1.2e-87 327.4 309 57.9
Prupe.5G170500 Prunus persica HOM05D005107 ORTHO05D006200 1.2e-87 327.4 309 57.3
Gohir.A12G272600 Gossypium hirsutum HOM05D005107 ORTHO05D006200 6.5e-86 321.6 308 54.2
MD14G1176600 Malus domestica HOM05D005107 ORTHO05D006200 1.4e-85 320.5 309 56.0
COL.COLO4_30099 Corchorus olitorius HOM05D005107 ORTHO05D006200 1.9e-85 320.1 306 55.2
Gorai.008G293700 Gossypium raimondii HOM05D005107 ORTHO05D006200 2.5e-85 319.7 308 54.2
Gohir.D12G273300 Gossypium hirsutum HOM05D005107 ORTHO05D006200 3.2e-85 319.3 308 54.2
Hma1.2p1_0592F.1_g185565 Hydrangea macrophylla HOM05D005107 ORTHO05D006200 5.5e-85 318.5 309 57.0
TAR374G1030 Trochodendron aralioides HOM05D005107 ORTHO05D006200 2.1e-84 316.6 309 54.7
Hma1.2p1_0046F.1_g026720 Hydrangea macrophylla HOM05D005107 ORTHO05D006200 2.7e-84 316.2 309 56.6
Duzib205G0074 Durio zibethinus HOM05D005107 ORTHO05D006200 3.5e-84 315.8 309 54.0
CSS0000196 Camellia sinensis var. sinensis HOM05D005107 ORTHO05D006200 7.9e-84 314.7 309 55.7
Sc22g0001200 Simmondsia chinensis HOM05D005107 ORTHO05D006200 1.8e-83 313.5 306 55.9
Gorai.001G071700 Gossypium raimondii HOM05D005107 ORTHO05D006200 1.1e-82 310.8 282 54.6
TWI14G0467 Tripterygium wilfordii HOM05D005107 ORTHO05D006200 1.5e-82 310.5 309 56.0
Gohir.D07G068200 Gossypium hirsutum HOM05D005107 ORTHO05D006200 5.7e-82 308.5 282 54.6
TAR622G1391 Trochodendron aralioides HOM05D005107 ORTHO05D006200 2.2e-81 306.6 309 56.3
MD06G1170900 Malus domestica HOM05D005107 ORTHO05D006200 8.2e-81 304.7 306 53.6
CANSAT80G2623 Cannabis sativa HOM05D005107 ORTHO05D006200 4.1e-80 302.4 308 52.6
Phvul.009G176100 Phaseolus vulgaris HOM05D005107 ORTHO05D006200 5.3e-80 302.0 309 52.1
Lalb_Chr08g0236621 Lupinus albus HOM05D005107 ORTHO05D006200 1.5e-79 300.4 309 52.4
PSO063G3062 Papaver somniferum HOM05D005107 ORTHO05D006200 1.5e-79 300.4 283 56.2
PSO832G2872 Papaver somniferum HOM05D005107 ORTHO05D006200 1.5e-79 300.4 287 55.4
Glyma.04G185700 Glycine max HOM05D005107 ORTHO05D006200 2.0e-79 300.1 309 52.4
Gohir.A07G063500 Gossypium hirsutum HOM05D005107 ORTHO05D006200 2.6e-79 299.7 282 52.8
FvH4_5g05630 Fragaria vesca HOM05D005107 ORTHO05D006200 4.5e-79 298.9 309 51.8
ClCG01G013290 Citrullus lanatus HOM05D005107 ORTHO05D006200 5.9e-79 298.5 308 53.2
PGR083G1692 Punica granatum HOM05D005107 ORTHO05D006200 5.9e-79 298.5 309 52.8
RcHm_v2.0_Chr7g0193181 Rosa chinensis HOM05D005107 ORTHO05D006200 7.7e-79 298.1 282 56.7
VMungo1309G0437 Vigna mungo HOM05D005107 ORTHO05D006200 1.3e-78 297.4 309 51.5
Aqoxy3G02846 Aquilegia oxysepala HOM05D005107 ORTHO05D006200 2.2e-78 296.6 282 56.7
CSS0014290 Camellia sinensis var. sinensis HOM05D005107 ORTHO05D006200 3.8e-78 295.8 306 55.2
arahy.Tifrunner.gnm1.ann1.6379ZA Arachis hypogaea HOM05D005107 ORTHO05D006200 8.5e-78 294.7 309 51.8
Lj4g0022030 Lotus japonicus HOM05D005107 ORTHO05D006200 8.5e-78 294.7 309 53.7
Nn2g12593 Nelumbo nucifera HOM05D005107 ORTHO05D006200 8.5e-78 294.7 310 52.3
Glyma.06G180400 Glycine max HOM05D005107 ORTHO05D006200 1.1e-77 294.3 309 53.4
arahy.Tifrunner.gnm1.ann1.5AH6W7 Arachis hypogaea HOM05D005107 ORTHO05D006200 2.5e-77 293.1 309 51.5
Ciclev10021009m.g Citrus clementina HOM05D005107 ORTHO05D006200 2.5e-77 293.1 311 53.4
Nitab4.5_0001207g0070 Nicotiana tabacum HOM05D005107 ORTHO05D006200 3.2e-77 292.7 279 54.8
Carub.0008s2376 Capsella rubella HOM05D005107 ORTHO05D006200 9.4e-77 291.2 313 49.2
FAN04G1011 Fragaria x ananassa HOM05D005107 ORTHO05D006200 9.4e-77 291.2 282 53.5
FAN18G1528 Fragaria x ananassa HOM05D005107 ORTHO05D006200 9.4e-77 291.2 282 53.2
CSS0028022 Camellia sinensis var. sinensis HOM05D005107 ORTHO05D006200 2.1e-76 290.0 293 56.0
AUR62018143 Chenopodium quinoa HOM05D005107 ORTHO05D006200 1.4e-75 287.3 309 51.5
Lj1g0017341 Lotus japonicus HOM05D005107 ORTHO05D006200 3.0e-75 286.2 311 49.5
Sp2g26180 Schrenkiella parvula HOM05D005107 ORTHO05D006200 3.0e-75 286.2 314 48.4
Nitab4.5_0003229g0090 Nicotiana tabacum HOM05D005107 ORTHO05D006200 5.1e-75 285.4 280 54.3
FAN08G1807 Fragaria x ananassa HOM05D005107 ORTHO05D006200 6.7e-75 285.0 283 53.7
VMungo1215G1987 Vigna mungo HOM05D005107 ORTHO05D006200 2.0e-74 283.5 286 54.2
AL8G40070 Arabidopsis lyrata HOM05D005107 ORTHO05D006200 4.3e-74 282.3 307 48.2
A09p08000 Brassica napus HOM05D005107 ORTHO05D006200 5.7e-74 282.0 317 46.7
MBI10_g44387_MAGBIO Magnolia biondii HOM05D005107 ORTHO05D006200 5.7e-74 282.0 311 48.2
PGSC0003DMG401018164 Solanum tuberosum HOM05D005107 ORTHO05D006200 5.7e-74 282.0 307 50.8
Aa31LG11G620 Aethionema arabicum HOM05D005107 ORTHO05D006200 2.8e-73 279.6 317 47.6
Sopen03g031750 Solanum pennellii HOM05D005107 ORTHO05D006200 2.8e-73 279.6 307 51.1
MELO3C002281.2 Cucumis melo HOM05D005107 ORTHO05D006200 1.4e-72 277.3 310 50.0
Thhalv10004512m.g Eutrema salsugineum HOM05D005107 ORTHO05D006200 1.4e-72 277.3 314 48.4
AT5G63050 Arabidopsis thaliana HOM05D005107 ORTHO05D006200 1.8e-72 276.9 307 47.6
Peaxi162Scf00089g01740 Petunia axillaris HOM05D005107 ORTHO05D006200 2.4e-72 276.6 305 49.8
Phvul.003G202200 Phaseolus vulgaris HOM05D005107 ORTHO05D006200 2.4e-72 276.6 284 53.9
Nn4g22685 Nelumbo nucifera HOM05D005107 ORTHO05D006200 5.3e-72 275.4 309 49.5
Nn4g22690 Nelumbo nucifera HOM05D005107 ORTHO05D006200 5.3e-72 275.4 309 49.5
SalBow5G2679 Salvia bowleyana HOM05D005107 ORTHO05D006200 5.3e-72 275.4 308 49.7
Solyc03g112670.3 Solanum lycopersicum HOM05D005107 ORTHO05D006200 9.1e-72 274.6 307 50.5
Ca_21938_v3 Cicer arietinum L. HOM05D005107 ORTHO05D006200 1.2e-71 274.2 309 50.2
Sed0009116 Sechium edule HOM05D005107 ORTHO05D006200 1.2e-71 274.2 283 52.3
TWI39G0316 Tripterygium wilfordii HOM05D005107 ORTHO05D006200 1.2e-71 274.2 315 50.8
Ah.10g031930 Amaranthus hybridus HOM05D005107 ORTHO05D006200 2.0e-71 273.5 306 52.0
BraA09t36452Z Brassica rapa HOM05D005107 ORTHO05D006200 4.5e-71 272.3 290 48.3
BcaB04g19949 Brassica carinata HOM05D005107 ORTHO05D006200 5.9e-71 271.9 306 47.1
TPR.G37531 Trifolium pratense HOM05D005107 ORTHO05D006200 5.9e-71 271.9 309 49.2
EL10Ac2g03054 Beta vulgaris HOM05D005107 ORTHO05D006200 7.7e-71 271.6 306 49.7
CAN.G1166.21 Capsicum annuum HOM05D005107 ORTHO05D006200 7.7e-71 271.6 309 49.2
C09p09050 Brassica napus HOM05D005107 ORTHO05D006200 1.3e-70 270.8 317 44.5
BolC9t53818H Brassica oleracea HOM05D005107 ORTHO05D006200 1.3e-70 270.8 317 44.5
AUR62042560 Chenopodium quinoa HOM05D005107 ORTHO05D006200 1.7e-70 270.4 309 48.9
Medtr4g105500 Medicago truncatula HOM05D005107 ORTHO05D006200 1.7e-70 270.4 310 49.7
Migut.O00123 Erythranthe guttata HOM05D005107 ORTHO05D006200 2.2e-70 270.0 307 50.5
CARHR276850 Cardamine hirsuta HOM05D005107 ORTHO05D006200 8.5e-70 268.1 310 46.1
Lj5A126T86 Lonicera japonica HOM05D005107 ORTHO05D006200 1.1e-69 267.7 278 51.8
Actinidia19110 Actinidia chinensis HOM05D005107 ORTHO05D006200 1.9e-69 266.9 272 52.6
Ca_16156_v3 Cicer arietinum L. HOM05D005107 ORTHO05D006200 3.2e-69 266.2 309 46.6
Oeu016417.1 Olea europaea HOM05D005107 ORTHO05D006200 3.2e-69 266.2 274 51.5
Psat4g058600 Pisum sativum HOM05D005107 ORTHO05D006200 7.2e-69 265.0 309 48.9
MSTRG.23144 Avicennia marina HOM05D005107 ORTHO05D006200 1.6e-68 263.8 308 49.0
Cc06_g17290 Coffea canephora HOM05D005107 ORTHO05D006200 2.1e-68 263.5 282 52.1
Sed0010155 Sechium edule HOM05D005107 ORTHO05D006200 6.7e-67 258.5 283 50.9
BraA06t25929Z Brassica rapa HOM05D005107 ORTHO05D006200 2.0e-66 256.9 283 47.7
Medtr3g077490 Medicago truncatula HOM05D005107 ORTHO05D006200 2.6e-66 256.5 309 45.3
Peaxi162Scf00255g00912 Petunia axillaris HOM05D005107 ORTHO05D006200 5.7e-66 255.4 307 45.6
FAN13G2858 Fragaria x ananassa HOM05D005107 ORTHO05D008464 2.2e-65 253.4 255 51.8
FAN18G1595 Fragaria x ananassa HOM05D005107 ORTHO05D008464 2.2e-65 253.4 269 49.4
C08p32660 Brassica napus HOM05D005107 ORTHO05D006200 2.8e-65 253.1 284 48.6
BolC8t50877H Brassica oleracea HOM05D005107 ORTHO05D006200 2.8e-65 253.1 284 48.6
A06p29810 Brassica napus HOM05D005107 ORTHO05D006200 4.8e-65 252.3 283 47.7
Lj9C446G12 Lonicera japonica HOM05D004430 ORTHO05D005088 8.2e-65 251.5 280 50.4
BolC3t18614H Brassica oleracea HOM05D005107 ORTHO05D006200 1.1e-64 251.1 284 48.6
HanXRQChr05g0154601 Helianthus annuus HOM05D005107 ORTHO05D006200 2.0e-63 246.9 288 50.0
Psat5g115520 Pisum sativum HOM05D005107 ORTHO05D006200 2.0e-63 246.9 311 45.0
TPR.G14919 Trifolium pratense HOM05D005107 ORTHO05D006200 4.5e-63 245.7 310 44.5
DCAR_016047 Daucus carota HOM05D005107 ORTHO05D006200 5.9e-63 245.4 292 47.6
HanXRQChr08g0235041 Helianthus annuus HOM05D005107 ORTHO05D006200 7.7e-63 245.0 282 47.5
CsaV3_1G008660 Cucumis sativus L. HOM05D005107 ORTHO05D006200 5.0e-62 242.3 308 46.8
THA.LOC104818212 Tarenaya hassleriana HOM05D005107 ORTHO05D006200 4.2e-61 239.2 313 42.2
ECA246G1934 Erigeron canadensis HOM05D005107 ORTHO05D006200 3.6e-60 236.1 277 48.0
Lsat_1_v5_gn_5_15301 Lactuca sativa HOM05D005107 ORTHO05D006200 4.7e-60 235.7 284 48.2
SalBow6G4644 Salvia bowleyana HOM05D005107 ORTHO05D006200 4.7e-60 235.7 282 44.7
THA.LOC104821481 Tarenaya hassleriana HOM05D005107 ORTHO05D006200 6.1e-60 235.3 298 42.6
CDE05G1562 Ceratophyllum demersum HOM05D005107 ORTHO05D006200 1.4e-59 234.2 278 46.8
Dinv38563 Davidia involucrata HOM05D003072 ORTHO05D008464 1.8e-59 233.8 277 50.9
unitig_26.g9615 Utricularia gibba HOM05D005107 ORTHO05D006200 3.7e-57 226.1 283 44.2
BcaC01g02550 Brassica carinata HOM05D005107 ORTHO05D006200 6.3e-57 225.3 284 45.1
ClCG06G017120 Citrullus lanatus HOM05D005107 ORTHO05D006200 6.3e-57 225.3 308 42.9
Migut.D01962 Erythranthe guttata HOM05D005107 ORTHO05D006200 1.2e-55 221.1 307 45.9
Hund13172 Selenicereus undatus HOM05D005107 ORTHO05D006200 2.9e-54 216.5 270 44.8
C03p63570 Brassica napus HOM05D005107 ORTHO05D006200 1.6e-52 210.7 253 45.8
CiPaw.12G028400 Carya illinoinensis HOM05D005107 ORTHO05D006200 6.1e-52 208.8 299 41.8
MELO3C026284.2 Cucumis melo HOM05D005107 ORTHO05D006200 2.6e-50 203.4 311 39.9
HPP92_001300 Vanilla planifolia HOM05D005107 ORTHO05D006200 4.1e-48 196.1 286 39.9
Eucgr.J01240 Eucalyptus grandis HOM05D005107 ORTHO05D006200 1.2e-47 194.5 137 64.2
Oeu024703.1 Olea europaea HOM05D005107 ORTHO05D006200 8.5e-46 188.3 200 51.0
ECA232G2224 Erigeron canadensis HOM05D005107 ORTHO05D006200 1.1e-45 188.0 243 44.0
ECA232G4933 Erigeron canadensis HOM05D005107 ORTHO05D006200 1.1e-45 188.0 243 44.0
Eucgr.C04410 Eucalyptus grandis HOM05D005107 ORTHO05D006200 7.2e-45 185.3 137 62.8
Eucgr.C03135 Eucalyptus grandis HOM05D005107 ORTHO05D006200 3.4e-42 176.4 129 61.2
SGA_v2.0_scaffold90G27886 Striga asiatica HOM05D005107 ORTHO05D006200 4.5e-39 166.0 212 41.0
BcaB02g09719 Brassica carinata HOM05D005107 ORTHO05D006200 1.9e-37 160.6 275 38.2
Lsat_1_v5_gn_1_28200 Lactuca sativa HOM05D005107 ORTHO05D006200 1.2e-36 157.9 292 37.3
HanXRQChr02g0035961 Helianthus annuus HOM05D005107 ORTHO05D006200 2.0e-34 150.6 285 38.2
BcaC04g23368 Brassica carinata HOM05D005107 ORTHO05D006200 1.0e-22 111.7 103 50.5
Duzib068G0452 Durio zibethinus HOM05D005107 ORTHO05D006200 8.0e-20 102.1 124 46.0
SEGI_21940 Sequoiadendron giganteum HOM05D024261 ORTHO05D006200 2.0e-10 70.9 199 30.7


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