Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.14G060500 Manihot esculenta HOM05D008921 ORTHO05D010506 3.8e-66 254.6 122 100.0
COL.COLO4_36759 Corchorus olitorius HOM05D008921 ORTHO05D010506 1.6e-24 116.3 113 54.0
Hma1.2p1_0046F.1_g027140 Hydrangea macrophylla HOM05D008921 ORTHO05D010506 3.6e-24 115.2 125 48.0
Cfa019218 Carpinus fangiana HOM05D008921 ORTHO05D010506 1.4e-23 113.2 128 46.9
Thecc.03G025900 Theobroma cacao HOM05D008921 ORTHO05D010506 1.4e-23 113.2 125 49.6
Haze_07588 Corylus avellana HOM05D008921 ORTHO05D010506 2.4e-23 112.5 123 46.3
Gorai.003G115500 Gossypium raimondii HOM05D008921 ORTHO05D010506 1.2e-22 110.2 124 46.8
Atru.chr9.2579 Acer truncatum HOM05D008921 ORTHO05D010506 2.0e-22 109.4 124 44.4
Potri.012G085800 Populus trichocarpa HOM05D008921 ORTHO05D010506 4.4e-22 108.2 130 43.8
Gohir.D03G109400 Gossypium hirsutum HOM05D008921 ORTHO05D010506 2.2e-21 105.9 124 45.2
CSS0048204 Camellia sinensis var. sinensis HOM05D008921 ORTHO05D010506 4.9e-21 104.8 121 43.8
Cfa019220 Carpinus fangiana HOM05D008921 ORTHO05D010506 4.2e-20 101.7 115 45.2
Cpa.g.sc159.19 Carica papaya HOM05D008921 ORTHO05D010506 1.6e-19 99.8 120 45.8
Ciclev10022809m.g Citrus clementina HOM05D008921 ORTHO05D010506 5.6e-17 91.3 129 41.1
Sabra12G0061700 Salix brachista HOM05D008921 ORTHO05D010506 1.3e-16 90.1 119 40.3
Potri.012G085901 Populus trichocarpa HOM05D008921 ORTHO05D010506 8.1e-16 87.4 119 38.7
Aqoxy5G03744 Aquilegia oxysepala HOM05D008921 ORTHO05D010506 1.8e-15 86.3 115 39.1
Peaxi162Scf00089g00137 Petunia axillaris HOM05D012681 ORTHO05D010506 1.5e-14 83.2 110 37.3
Eucgr.B00219 Eucalyptus grandis HOM05D008921 ORTHO05D010506 2.6e-14 82.4 127 33.9
Nitab4.5_0010452g0050 Nicotiana tabacum HOM05D012681 ORTHO05D010506 4.5e-14 81.6 107 38.3
Nitab4.5_0001793g0040 Nicotiana tabacum HOM05D012681 ORTHO05D010506 7.6e-14 80.9 113 38.1
Gohir.A03G057050 Gossypium hirsutum HOM05D008921 ORTHO05D010506 1.3e-13 80.1 123 35.8
Peaxi162Scf00801g00022 Petunia axillaris HOM05D012681 ORTHO05D010506 3.8e-13 78.6 108 38.9
GSVIVG01007644001 Vitis vinifera HOM05D008921 ORTHO05D010506 4.9e-13 78.2 113 38.1
Prupe.6G157600 Prunus persica HOM05D008921 ORTHO05D010506 8.4e-13 77.4 131 38.9
Nitab4.5_0001566g0030 Nicotiana tabacum HOM05D012681 ORTHO05D010506 1.9e-12 76.3 113 38.1
Rhsim08G0177800 Rhododendron simsii HOM05D008921 ORTHO05D010506 3.2e-12 75.5 106 44.3
TAR622G0966 Trochodendron aralioides HOM05D008921 ORTHO05D010506 4.2e-12 75.1 116 38.8
Nitab4.5_0000025g0320 Nicotiana tabacum HOM05D012681 ORTHO05D010506 5.4e-12 74.7 109 35.8
Potri.015G084101 Populus trichocarpa HOM05D008921 ORTHO05D010506 2.7e-11 72.4 53 56.6
Prupe.5G165500 Prunus persica HOM05D008921 ORTHO05D010506 4.6e-11 71.6 120 39.2
RcHm_v2.0_Chr7g0192561 Rosa chinensis HOM05D008921 ORTHO05D010506 1.8e-10 69.7 119 37.0
TPR.G40149 Trifolium pratense HOM05D010415 ORTHO05D013002 2.3e-10 69.3 115 34.8
FAN08G0942 Fragaria x ananassa HOM05D008921 ORTHO05D010506 3.9e-10 68.6 111 36.9
Eucgr.K02790 Eucalyptus grandis HOM05D042355 ORTHO05D010506 5.1e-10 68.2 113 36.3
SGA_v2.0_scaffold114G31809 Striga asiatica HOM05D008921 ORTHO05D010506 5.1e-10 68.2 111 36.9
FAN04G2975 Fragaria x ananassa HOM05D008921 ORTHO05D010506 5.6e-09 64.7 111 35.1
Medtr3g076950 Medicago truncatula HOM05D010415 ORTHO05D013002 5.6e-09 64.7 112 34.8
Migut.D02003 Erythranthe guttata HOM05D024513 ORTHO05D010506 9.6e-09 63.9 75 46.7
FvH4_5g06300 Fragaria vesca HOM05D008921 ORTHO05D010506 9.6e-09 63.9 111 34.2
FAN18G0512 Fragaria x ananassa HOM05D008921 ORTHO05D010506 9.6e-09 63.9 111 34.2
CAN.G338.33 Capsicum annuum HOM05D012681 ORTHO05D010506 1.3e-08 63.5 116 32.8
Lj5g0011006 Lotus japonicus HOM05D010415 ORTHO05D013002 2.8e-08 62.4 112 33.0
Eucgr.K02796 Eucalyptus grandis HOM05D042355 ORTHO05D010506 6.2e-08 61.2 113 33.6
Psat5g118200 Pisum sativum HOM05D010415 ORTHO05D013002 1.8e-07 59.7 114 33.3
PGSC0003DMG400018124 Solanum tuberosum HOM05D012681 ORTHO05D010506 4.0e-07 58.5 107 35.5
Nn3g16692 Nelumbo nucifera HOM05D059649 ORTHO05D010506 9.0e-07 57.4 103 36.9
QL07p048894 Quercus lobata HOM05D008921 ORTHO05D010506 9.0e-07 57.4 46 60.9
Solyc03g112210.1 Solanum lycopersicum HOM05D012681 ORTHO05D010506 9.0e-07 57.4 107 34.6
Sopen03g031310 Solanum pennellii HOM05D012681 ORTHO05D010506 9.0e-07 57.4 107 34.6
Actinidia08131 Actinidia chinensis HOM05D021476 ORTHO05D016437 1.2e-06 57.0 98 30.6
Glyma.17G084600 Glycine max HOM05D010415 ORTHO05D013002 1.2e-06 57.0 104 32.7
MSTRG.9692 Avicennia marina HOM05D024513 ORTHO05D010506 2.0e-06 56.2 120 34.2
arahy.Tifrunner.gnm1.ann1.TC1G7F Arachis hypogaea HOM05D010415 ORTHO05D013002 2.6e-06 55.8 101 33.7
Migut.D02001 Erythranthe guttata HOM05D024513 ORTHO05D010506 4.5e-06 55.1 78 42.3
Potri.012G086200 Populus trichocarpa HOM05D008921 ORTHO05D010506 4.5e-06 55.1 78 38.5


User provided reference genes

Program Settings