Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.14G057736 Manihot esculenta HOM05D007296 ORTHO05D009201 1.4e-66 256.1 127 100.0
Sabra15G0109100 Salix brachista HOM05D000631 ORTHO05D000524 2.1e-30 136.0 124 62.1
Thecc.03G117800 Theobroma cacao HOM05D007296 ORTHO05D009201 8.4e-24 114.0 103 60.2
Nn3g16657 Nelumbo nucifera HOM05D007296 ORTHO05D009201 2.7e-22 109.0 130 50.8
Prupe.5G162900 Prunus persica HOM05D007296 ORTHO05D009201 1.0e-21 107.1 131 48.9
CiPaw.11G015200 Carya illinoinensis HOM05D007296 ORTHO05D009201 1.8e-21 106.3 104 54.8
QL10p006090 Quercus lobata HOM05D007296 ORTHO05D009201 1.8e-21 106.3 112 53.6
COL.COLO4_30221 Corchorus olitorius HOM05D007296 ORTHO05D009201 2.5e-20 102.4 120 49.2
TAR371G0818 Trochodendron aralioides HOM05D007296 ORTHO05D009201 7.4e-20 100.9 103 55.3
CiPaw.03G046500 Carya illinoinensis HOM05D007296 ORTHO05D009201 1.1e-18 97.1 129 45.7
Ciclev10022926m.g Citrus clementina HOM05D007296 ORTHO05D009201 4.1e-18 95.1 98 54.1
Cfa007330 Carpinus fangiana HOM05D007296 ORTHO05D009201 2.0e-17 92.8 126 43.7
Haze_14767 Corylus avellana HOM05D007296 ORTHO05D009201 2.6e-17 92.4 126 43.7
Gohir.D07G059700 Gossypium hirsutum HOM05D007296 ORTHO05D009201 3.4e-17 92.0 111 50.5
Gorai.001G063200 Gossypium raimondii HOM05D007296 ORTHO05D009201 3.4e-17 92.0 111 50.5
Nn4g22550 Nelumbo nucifera HOM05D007296 ORTHO05D009201 4.5e-17 91.7 104 47.1
CSS0008661 Camellia sinensis var. sinensis HOM05D007296 ORTHO05D009201 5.9e-17 91.3 106 47.2
Gohir.A07G055400 Gossypium hirsutum HOM05D007296 ORTHO05D009201 7.6e-17 90.9 111 50.5
Ca_30679_v3 Cicer arietinum L. HOM05D007296 ORTHO05D009201 1.0e-16 90.5 95 49.5
Lj4g0005296 Lotus japonicus HOM05D007296 ORTHO05D009201 5.0e-16 88.2 109 46.8
Glyma.05G042900 Glycine max HOM05D007296 ORTHO05D009201 1.4e-15 86.7 103 46.6
Hma1.2p1_0818F.1_g223340 Hydrangea macrophylla HOM05D007296 ORTHO05D009201 2.5e-15 85.9 131 42.0
TAR374G0807 Trochodendron aralioides HOM05D007296 ORTHO05D009201 5.5e-15 84.7 124 47.6
CiPaw.04G030100 Carya illinoinensis HOM05D007296 ORTHO05D009201 7.2e-15 84.3 127 46.5
Potri.001G342100 Populus trichocarpa HOM05D007296 ORTHO05D009201 7.2e-15 84.3 104 46.2
PSO017G3033 Papaver somniferum HOM05D007296 ORTHO05D009201 1.2e-14 83.6 104 42.3
Phvul.003G206500 Phaseolus vulgaris HOM05D007296 ORTHO05D009201 2.1e-14 82.8 101 45.5
Glyma.16G068200 Glycine max HOM05D007296 ORTHO05D009201 1.8e-13 79.7 104 44.2
Aqoxy7G03797 Aquilegia oxysepala HOM05D007296 ORTHO05D009201 3.0e-13 79.0 99 42.4
QL10p006100 Quercus lobata HOM05D007296 ORTHO05D009201 5.1e-13 78.2 94 48.9
Aqoxy5G03689 Aquilegia oxysepala HOM05D007296 ORTHO05D009201 1.1e-12 77.0 99 43.4
SalBow1G6940 Salvia bowleyana HOM05D007296 ORTHO05D009201 1.5e-12 76.6 107 40.2
Cc02_g32290 Coffea canephora HOM05D007296 ORTHO05D009201 2.5e-12 75.9 134 40.3
Dinv33417 Davidia involucrata HOM05D007296 ORTHO05D009201 3.3e-12 75.5 105 45.7
VMungo1215G1852 Vigna mungo HOM05D007296 ORTHO05D009201 4.3e-12 75.1 89 46.1
ClCG09G019420 Citrullus lanatus HOM05D007296 ORTHO05D009201 7.4e-12 74.3 123 36.6
Eucgr.I01721 Eucalyptus grandis HOM05D007296 ORTHO05D009201 7.4e-12 74.3 118 41.5
Glyma.19G078800 Glycine max HOM05D007296 ORTHO05D009201 7.4e-12 74.3 100 45.0
TPR.G1088 Trifolium pratense HOM05D007296 ORTHO05D009201 9.7e-12 73.9 101 43.6
Lalb_Chr07g0183081 Lupinus albus HOM05D007296 ORTHO05D009201 1.3e-11 73.6 81 49.4
MBI10_g42976_MAGBIO Magnolia biondii HOM05D007296 ORTHO05D009201 1.3e-11 73.6 106 40.6
Medtr7g033080 Medicago truncatula HOM05D007296 ORTHO05D009201 1.3e-11 73.6 99 44.4
Psat3g172000 Pisum sativum HOM05D007296 ORTHO05D009201 2.2e-11 72.8 100 45.0
ATR0199G042 Amborella trichopoda HOM05D007296 ORTHO05D009201 2.8e-11 72.4 119 40.3
TWI56G0033 Tripterygium wilfordii HOM05D007296 ORTHO05D009201 3.7e-11 72.0 117 40.2
QL02p073829 Quercus lobata HOM05D007296 ORTHO05D009201 6.3e-11 71.2 122 36.9
PGSC0003DMG400012614 Solanum tuberosum HOM05D007296 ORTHO05D009201 6.3e-11 71.2 118 35.6
Ca_06610_v3 Cicer arietinum L. HOM05D007296 ORTHO05D009201 8.2e-11 70.9 104 42.3
Ca_30727_v3 Cicer arietinum L. HOM05D007296 ORTHO05D009201 8.2e-11 70.9 104 42.3
CAN.G473.34 Capsicum annuum HOM05D007296 ORTHO05D009201 1.1e-10 70.5 116 37.1
Ciclev10017118m.g Citrus clementina HOM05D007296 ORTHO05D009201 1.1e-10 70.5 113 39.8
PGR142G0831 Punica granatum HOM05D007296 ORTHO05D009201 1.1e-10 70.5 132 42.4
Lsat_1_v5_gn_2_91081 Lactuca sativa HOM05D007296 ORTHO05D009201 1.4e-10 70.1 104 45.2
Thecc.04G021100 Theobroma cacao HOM05D007296 ORTHO05D009201 2.4e-10 69.3 107 40.2
DCAR_021738 Daucus carota HOM05D000631 ORTHO05D000524 3.1e-10 68.9 112 38.4
Manes.15G152600 Manihot esculenta HOM05D007296 ORTHO05D009201 3.1e-10 68.9 104 37.5
Atru.chr6.2441 Acer truncatum HOM05D007296 ORTHO05D009201 9.1e-10 67.4 109 37.6
Phvul.008G151600 Phaseolus vulgaris HOM05D007296 ORTHO05D009201 9.1e-10 67.4 91 41.8
Lj1g0014101 Lotus japonicus HOM05D007296 ORTHO05D009201 1.5e-09 66.6 104 38.5
Aqoxy3G01286 Aquilegia oxysepala HOM05D007296 ORTHO05D009201 2.6e-09 65.9 105 31.4
Gohir.A09G030400 Gossypium hirsutum HOM05D007296 ORTHO05D009201 2.6e-09 65.9 135 32.6
VMungo1383G0878 Vigna mungo HOM05D007296 ORTHO05D009201 2.6e-09 65.9 109 41.3
CsaV3_5G026960 Cucumis sativus L. HOM05D007296 ORTHO05D009201 3.4e-09 65.5 118 35.6
MELO3C021597.2 Cucumis melo HOM05D007296 ORTHO05D009201 4.5e-09 65.1 117 35.9
Gohir.D09G030000 Gossypium hirsutum HOM05D007296 ORTHO05D009201 4.5e-09 65.1 135 32.6
Lsat_1_v5_gn_0_6101 Lactuca sativa HOM05D007296 ORTHO05D009201 4.5e-09 65.1 112 39.3
SGA_v2.0_scaffold18G08254 Striga asiatica HOM05D007296 ORTHO05D009201 5.9e-09 64.7 110 42.7
Lalb_Chr22g0360681 Lupinus albus HOM05D007296 ORTHO05D009201 7.7e-09 64.3 102 37.3
Atru.chr9.2613 Acer truncatum HOM05D007296 ORTHO05D009201 2.2e-08 62.8 70 55.7
Prupe.3G295100 Prunus persica HOM05D007296 ORTHO05D009201 2.9e-08 62.4 90 43.3
EL10Ac5g12075 Beta vulgaris HOM05D007296 ORTHO05D009201 8.5e-08 60.8 118 36.4
Duzib187G0331 Durio zibethinus HOM05D007296 ORTHO05D009201 1.1e-07 60.5 104 35.6
Sed0024202 Sechium edule HOM05D007296 ORTHO05D009201 1.1e-07 60.5 109 35.8
SGA_v2.0_scaffold47G17522 Striga asiatica HOM05D000631 ORTHO05D000524 2.5e-07 59.3 103 38.8
Migut.H00030 Erythranthe guttata HOM05D007296 ORTHO05D009201 3.2e-07 58.9 108 39.8
Cpa.g.sc130.72 Carica papaya HOM05D007296 ORTHO05D009201 4.2e-07 58.5 141 34.0
Sc16g0004380 Simmondsia chinensis HOM05D007296 ORTHO05D009201 4.2e-07 58.5 103 38.8
ECA246G1504 Erigeron canadensis HOM05D007296 ORTHO05D009201 9.4e-07 57.4 114 38.6
Sopen02g038130 Solanum pennellii HOM05D007296 ORTHO05D009201 3.6e-06 55.5 128 32.0


User provided reference genes

Program Settings