Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.14G057300 Manihot esculenta HOM05D007617 ORTHO05D007195 4.9e-70 267.7 137 100.0
Manes.06G112400 Manihot esculenta HOM05D007617 ORTHO05D007195 8.2e-41 170.6 137 68.6
Potri.012G090700 Populus trichocarpa HOM05D007617 ORTHO05D007195 1.7e-25 119.8 143 51.0
Ciclev10022896m.g Citrus clementina HOM05D007617 ORTHO05D007195 1.2e-15 87.0 138 45.7
MD06G1161600 Malus domestica HOM05D007617 ORTHO05D007195 3.5e-15 85.5 143 44.8
Haze_07632 Corylus avellana HOM05D007617 ORTHO05D007195 2.9e-14 82.4 150 42.0
Prupe.5G161500 Prunus persica HOM05D007617 ORTHO05D007195 1.1e-13 80.5 149 42.3
RcHm_v2.0_Chr7g0191931 Rosa chinensis HOM05D007617 ORTHO05D007195 1.9e-13 79.7 137 43.1
Thecc.03G118700 Theobroma cacao HOM05D011792 ORTHO05D007195 1.9e-13 79.7 151 42.4
TPR.G31739 Trifolium pratense HOM05D007617 ORTHO05D007195 3.2e-13 79.0 145 41.4
vmacro18302 Vaccinium macrocarpon HOM05D007617 ORTHO05D007195 7.2e-13 77.8 140 41.4
TAR374G0075 Trochodendron aralioides HOM05D007617 ORTHO05D007195 1.2e-12 77.0 146 41.8
Atru.chr9.1807 Acer truncatum HOM05D007617 ORTHO05D007195 2.1e-12 76.3 140 45.0
Aqoxy5G03650 Aquilegia oxysepala HOM05D007617 ORTHO05D007195 2.1e-12 76.3 145 41.4
CiPaw.11G014400 Carya illinoinensis HOM05D007617 ORTHO05D007195 1.0e-11 73.9 149 38.9
FAN08G2040 Fragaria x ananassa HOM05D007617 ORTHO05D007195 1.0e-11 73.9 137 39.4
FAN18G3066 Fragaria x ananassa HOM05D007617 ORTHO05D007195 1.0e-11 73.9 69 62.3
QL02p073546 Quercus lobata HOM05D007617 ORTHO05D007195 1.0e-11 73.9 144 41.0
ATR1145G009 Amborella trichopoda HOM05D007617 ORTHO05D007195 1.8e-11 73.2 99 47.5
MD02G1049300 Malus domestica HOM05D007617 ORTHO05D007195 2.3e-11 72.8 143 42.7
PGR142G0897 Punica granatum HOM05D007617 ORTHO05D007195 4.0e-11 72.0 87 51.7
FvH4_5g06710 Fragaria vesca HOM05D007617 ORTHO05D007195 6.8e-11 71.2 137 39.4
FAN13G2538 Fragaria x ananassa HOM05D007617 ORTHO05D007195 1.2e-10 70.5 137 39.4
Sopen02g017030 Solanum pennellii HOM05D007617 ORTHO05D007195 1.2e-10 70.5 130 45.4
Solyc02g067910.1 Solanum lycopersicum HOM05D007617 ORTHO05D007195 1.5e-10 70.1 130 45.4
CANSAT64G0294 Cannabis sativa HOM05D007617 ORTHO05D007195 2.0e-10 69.7 144 40.3
Prupe.3G296000 Prunus persica HOM05D007617 ORTHO05D007195 2.0e-10 69.7 69 56.5
QL10p005918 Quercus lobata HOM05D007617 ORTHO05D007195 2.0e-10 69.7 146 41.8
DCAR_011273 Daucus carota HOM05D007617 ORTHO05D007195 3.4e-10 68.9 142 40.8
Psat6g179560 Pisum sativum HOM05D007617 ORTHO05D007195 3.4e-10 68.9 106 40.6
Medtr1g093790 Medicago truncatula HOM05D007617 ORTHO05D007195 4.4e-10 68.6 147 38.1
Gohir.D07G059400 Gossypium hirsutum HOM05D011792 ORTHO05D007195 5.7e-10 68.2 150 40.7
Ciclev10017789m.g Citrus clementina HOM05D007617 ORTHO05D007195 9.8e-10 67.4 149 41.6
MD14G1167200 Malus domestica HOM05D007617 ORTHO05D007195 1.3e-09 67.0 131 39.7
Sed0018064 Sechium edule HOM05D007617 ORTHO05D007195 1.3e-09 67.0 147 41.5
Glyma.05G114700 Glycine max HOM05D007617 ORTHO05D007195 1.7e-09 66.6 73 54.8
FAN04G0785 Fragaria x ananassa HOM05D007617 ORTHO05D007195 2.2e-09 66.2 137 38.0
Lalb_Chr02g0158101 Lupinus albus HOM05D007617 ORTHO05D007195 2.2e-09 66.2 118 40.7
Lalb_Chr21g0317701 Lupinus albus HOM05D007617 ORTHO05D007195 2.2e-09 66.2 142 35.9
Nitab4.5_0000040g0620 Nicotiana tabacum HOM05D007617 ORTHO05D007195 2.8e-09 65.9 143 39.2
Gohir.A07G055100 Gossypium hirsutum HOM05D011792 ORTHO05D007195 4.8e-09 65.1 150 40.0
TWI39G0914 Tripterygium wilfordii HOM05D007617 ORTHO05D007195 6.3e-09 64.7 137 40.1
Nitab4.5_0004496g0030 Nicotiana tabacum HOM05D007617 ORTHO05D007195 1.1e-08 63.9 140 38.6
Sopen02g038090 Solanum pennellii HOM05D007617 ORTHO05D007195 1.1e-08 63.9 134 37.3
PGSC0003DMG400012616 Solanum tuberosum HOM05D007617 ORTHO05D007195 1.1e-08 63.9 134 38.8
CiPaw.03G047400 Carya illinoinensis HOM05D007617 ORTHO05D007195 1.4e-08 63.5 91 47.3
CiPaw.09G026700 Carya illinoinensis HOM05D007617 ORTHO05D007195 1.4e-08 63.5 91 47.3
Gorai.001G062900 Gossypium raimondii HOM05D011792 ORTHO05D007195 1.4e-08 63.5 150 39.3
Lsat_1_v5_gn_2_91001 Lactuca sativa HOM05D007617 ORTHO05D007195 1.8e-08 63.2 135 42.2
TWI23G0333 Tripterygium wilfordii HOM05D007617 ORTHO05D007195 1.8e-08 63.2 136 36.0
Hma1.2p1_0818F.1_g223400 Hydrangea macrophylla HOM05D007617 ORTHO05D007195 2.4e-08 62.8 143 39.9
Lsat_1_v5_gn_2_94241 Lactuca sativa HOM05D007617 ORTHO05D007195 2.4e-08 62.8 142 38.7
Atru.chr6.2453 Acer truncatum HOM05D007617 ORTHO05D007195 3.1e-08 62.4 141 36.9
CAN.G1057.14 Capsicum annuum HOM05D007617 ORTHO05D007195 3.1e-08 62.4 130 40.0
CANSAT80G0013 Cannabis sativa HOM05D007617 ORTHO05D007195 4.1e-08 62.0 145 40.7
AL8G40240 Arabidopsis lyrata HOM05D010525 ORTHO05D007195 7.0e-08 61.2 119 41.2
VMungo0464G0279 Vigna mungo HOM05D007617 ORTHO05D007195 1.6e-07 60.1 119 37.8
Phvul.004G059700 Phaseolus vulgaris HOM05D007617 ORTHO05D007195 2.0e-07 59.7 86 46.5
Thhalv10010898m.g Eutrema salsugineum HOM05D010525 ORTHO05D007195 3.5e-07 58.9 145 37.9
Glyma.19G053100 Glycine max HOM05D007617 ORTHO05D007195 3.5e-07 58.9 121 39.7
EL10As2g23175 Beta vulgaris HOM05D007617 ORTHO05D007195 4.5e-07 58.5 138 39.1
Nitab4.5_0014774g0010 Nicotiana tabacum HOM05D007617 ORTHO05D007195 4.5e-07 58.5 139 36.7
Cc07_g00130 Coffea canephora HOM05D007617 ORTHO05D007195 5.9e-07 58.2 148 39.9
Sp5g13710 Schrenkiella parvula HOM05D010525 ORTHO05D007195 7.7e-07 57.8 144 38.2
Dinv33408 Davidia involucrata HOM05D007617 ORTHO05D007195 1.0e-06 57.4 133 39.8
PGSC0003DMG400006919 Solanum tuberosum HOM05D007617 ORTHO05D007195 1.0e-06 57.4 137 36.5
Duzib205G1108 Durio zibethinus HOM05D011792 ORTHO05D007195 1.3e-06 57.0 153 37.3
BcaB01g00826 Brassica carinata HOM05D010525 ORTHO05D007195 1.7e-06 56.6 148 35.8
Carub.0008s2391 Capsella rubella HOM05D010525 ORTHO05D007195 2.9e-06 55.8 110 42.7
ClCG05G013140 Citrullus lanatus HOM05D007617 ORTHO05D007195 2.9e-06 55.8 132 37.9
Migut.K01418 Erythranthe guttata HOM05D007617 ORTHO05D007195 3.8e-06 55.5 84 44.0
Oeu023836.1 Olea europaea HOM05D007617 ORTHO05D007195 3.8e-06 55.5 153 32.7
MSTRG.549 Avicennia marina HOM05D007617 ORTHO05D007195 8.6e-06 54.3 144 34.0


User provided reference genes

Program Settings