Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.14G055100 Manihot esculenta HOM05D008121 ORTHO05D009878 4.7e-98 361.3 198 100.0
Potri.015G091100 Populus trichocarpa HOM05D008121 ORTHO05D009878 3.0e-36 156.0 198 55.1
Sabra15G0113100 Salix brachista HOM05D000290 ORTHO05D004630 1.4e-28 130.6 201 48.3
RcHm_v2.0_Chr7g0190901 Rosa chinensis HOM05D008121 ORTHO05D009878 6.3e-26 121.7 192 46.9
Haze_07274 Corylus avellana HOM05D008121 ORTHO05D009878 1.0e-23 114.4 202 43.6
FvH4_5g07590 Fragaria vesca HOM05D008121 ORTHO05D009878 5.0e-23 112.1 192 44.3
CiPaw.12G036100 Carya illinoinensis HOM05D008121 ORTHO05D009878 1.6e-21 107.1 192 41.7
Prupe.5G156300 Prunus persica HOM05D008121 ORTHO05D009878 2.7e-21 106.3 203 41.9
Cfa018889 Carpinus fangiana HOM05D008121 ORTHO05D009878 2.6e-19 99.8 200 41.0
CiPaw.11G011700 Carya illinoinensis HOM05D008121 ORTHO05D009878 1.3e-18 97.4 190 42.1
Cpa.g.sc4.77 Carica papaya HOM05D008121 ORTHO05D009878 2.8e-18 96.3 157 42.0
FAN08G2628 Fragaria x ananassa HOM05D000290 ORTHO05D004630 3.7e-18 95.9 158 44.3
FAN04G1418 Fragaria x ananassa HOM05D000290 ORTHO05D004630 8.3e-18 94.7 188 41.5
QL10p005006 Quercus lobata HOM05D008121 ORTHO05D009878 2.4e-17 93.2 195 42.6
GSVIVG01007536001 Vitis vinifera HOM05D008121 ORTHO05D009878 3.1e-17 92.8 173 42.8
MD06G1149100 Malus domestica HOM05D008121 ORTHO05D009878 5.4e-17 92.0 188 41.5
TWI14G0571 Tripterygium wilfordii HOM05D008121 ORTHO05D009878 1.2e-16 90.9 198 39.4
Duzib205G1258 Durio zibethinus HOM05D008121 ORTHO05D009878 1.1e-14 84.3 200 40.0
Atru.chr9.1017 Acer truncatum HOM05D008121 ORTHO05D009878 1.9e-14 83.6 195 39.0
Thecc.03G123300 Theobroma cacao HOM05D008121 ORTHO05D009878 6.1e-13 78.6 182 41.8
ClCG03G003530 Citrullus lanatus HOM05D008121 ORTHO05D009878 1.0e-12 77.8 189 40.7
CsaV3_1G009340 Cucumis sativus L. HOM05D008121 ORTHO05D009878 2.3e-12 76.6 197 37.1
Duzib084G1233 Durio zibethinus HOM05D008121 ORTHO05D009878 2.3e-12 76.6 193 37.3
Hma1.2p1_0014F.1_g009910 Hydrangea macrophylla HOM05D008121 ORTHO05D009878 6.8e-12 75.1 197 37.1
AT3G48490 Arabidopsis thaliana HOM05D011481 ORTHO05D009878 1.2e-11 74.3 143 38.5
CANSAT80G0868 Cannabis sativa HOM05D008121 ORTHO05D009878 9.8e-11 71.2 194 39.2
Gohir.A09G245200 Gossypium hirsutum HOM05D008121 ORTHO05D009878 9.8e-11 71.2 190 36.8
TPR.G37567 Trifolium pratense HOM05D008121 ORTHO05D009878 2.2e-10 70.1 133 39.8
Sed0025515 Sechium edule HOM05D008121 ORTHO05D009878 2.8e-10 69.7 193 35.2
FAN18G2983 Fragaria x ananassa HOM05D000290 ORTHO05D004630 3.7e-10 69.3 161 39.1
AL5G27920 Arabidopsis lyrata HOM05D011481 ORTHO05D009878 4.9e-10 68.9 143 39.2
MELO3C002337.2 Cucumis melo HOM05D008121 ORTHO05D009878 8.3e-10 68.2 193 36.3
Nn4g22451 Nelumbo nucifera HOM05D008121 ORTHO05D009878 8.3e-10 68.2 72 59.7
Gohir.D09G246100 Gossypium hirsutum HOM05D008121 ORTHO05D009878 1.1e-09 67.8 196 35.7
Lalb_Chr13g0297421 Lupinus albus HOM05D008121 ORTHO05D009878 1.1e-09 67.8 164 37.2
EL10Ac7g18085 Beta vulgaris HOM05D008121 ORTHO05D009878 3.1e-09 66.2 177 35.0
AUR62001288 Chenopodium quinoa HOM05D008121 ORTHO05D009878 4.1e-09 65.9 171 36.3
Gorai.006G270600 Gossypium raimondii HOM05D008121 ORTHO05D009878 4.1e-09 65.9 196 35.2
Ah.15g095290 Amaranthus hybridus HOM05D001185 ORTHO05D002551 5.4e-09 65.5 147 39.5
CSS0015443 Camellia sinensis var. sinensis HOM05D008121 ORTHO05D009878 5.4e-09 65.5 189 34.4
Glyma.17G127300 Glycine max HOM05D008121 ORTHO05D009878 5.4e-09 65.5 178 36.5
BcaC07g39334 Brassica carinata HOM05D011481 ORTHO05D009878 7.0e-09 65.1 74 52.7
C08p23500 Brassica napus HOM05D011481 ORTHO05D009878 7.0e-09 65.1 74 52.7
BolC8t49978H Brassica oleracea HOM05D011481 ORTHO05D009878 7.0e-09 65.1 74 52.7
Thhalv10011023m.g Eutrema salsugineum HOM05D011481 ORTHO05D009878 1.6e-08 63.9 88 46.6
Medtr4g104040 Medicago truncatula HOM05D008121 ORTHO05D009878 1.6e-08 63.9 190 38.4
Carub.0005s1467 Capsella rubella HOM05D011481 ORTHO05D009878 2.0e-08 63.5 143 35.7
A06p19190 Brassica napus HOM05D011481 ORTHO05D009878 2.7e-08 63.2 74 51.4
BraA06t25002Z Brassica rapa HOM05D011481 ORTHO05D009878 2.7e-08 63.2 74 51.4
Lj4g0024363 Lotus japonicus HOM05D008121 ORTHO05D009878 2.7e-08 63.2 159 40.3
Actinidia25609 Actinidia chinensis HOM05D008121 ORTHO05D009878 4.5e-08 62.4 173 36.4
Psat4g064880 Pisum sativum HOM05D008121 ORTHO05D009878 4.5e-08 62.4 141 32.6
Rhsim08G0185200 Rhododendron simsii HOM05D000290 ORTHO05D004630 4.5e-08 62.4 173 32.9
Oeu018378.1 Olea europaea HOM05D008121 ORTHO05D009878 1.0e-07 61.2 155 34.2
BcaB01g00807 Brassica carinata HOM05D011481 ORTHO05D009878 1.7e-07 60.5 135 36.3
Dinv38465 Davidia involucrata HOM05D008121 ORTHO05D009878 1.7e-07 60.5 124 39.5
Hund05652 Selenicereus undatus HOM05D008121 ORTHO05D009878 1.7e-07 60.5 50 66.0
arahy.Tifrunner.gnm1.ann1.DV5N5R Arachis hypogaea HOM05D008121 ORTHO05D009878 2.9e-07 59.7 191 37.2
COL.COLO4_03517 Corchorus olitorius HOM05D008121 ORTHO05D009878 2.9e-07 59.7 199 33.7
Glyma.05G045100 Glycine max HOM05D008121 ORTHO05D009878 2.9e-07 59.7 171 36.3
arahy.Tifrunner.gnm1.ann1.YZZN9M Arachis hypogaea HOM05D008121 ORTHO05D009878 3.8e-07 59.3 191 38.2
Dinv02922 Davidia involucrata HOM05D008121 ORTHO05D009878 6.6e-07 58.5 124 39.5
Phvul.003G208400 Phaseolus vulgaris HOM05D008121 ORTHO05D009878 6.6e-07 58.5 192 35.9
vmacro19236 Vaccinium macrocarpon HOM05D008121 ORTHO05D009878 6.6e-07 58.5 174 32.2
Aa31LG4G17080 Aethionema arabicum HOM05D011481 ORTHO05D009878 3.3e-06 56.2 144 33.3
SGA_v2.0_scaffold161G37821 Striga asiatica HOM05D008121 ORTHO05D009878 3.3e-06 56.2 171 35.1
THA.LOC104821506 Tarenaya hassleriana HOM05D011481 ORTHO05D009878 4.3e-06 55.8 169 33.1
Ca_05561_v3 Cicer arietinum L. HOM05D008121 ORTHO05D009878 5.6e-06 55.5 178 33.1
Ciclev10023121m.g Citrus clementina HOM05D008121 ORTHO05D009878 5.6e-06 55.5 54 59.3
Ciclev10024026m.g Citrus clementina HOM05D008121 ORTHO05D009878 5.6e-06 55.5 54 59.3


User provided reference genes

Program Settings