Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.14G053800 Manihot esculenta HOM05D004497 ORTHO05D005539 9.1e-223 776.5 383 100.0
Potri.015G092400 Populus trichocarpa HOM05D004497 ORTHO05D005539 7.6e-161 570.9 345 78.8
Potri.012G095100 Populus trichocarpa HOM05D004497 ORTHO05D005539 7.1e-159 564.3 345 77.7
Sabra15G0114200 Salix brachista HOM05D004497 ORTHO05D005539 7.4e-156 554.3 345 75.9
Atru.chr3.3406 Acer truncatum HOM05D004497 ORTHO05D005539 1.2e-153 547.0 349 75.9
Thecc.03G125300 Theobroma cacao HOM05D004497 ORTHO05D005539 2.0e-153 546.2 349 75.9
Duzib205G0501 Durio zibethinus HOM05D004497 ORTHO05D005539 1.3e-152 543.5 349 75.1
COL.COLO4_28066 Corchorus olitorius HOM05D004497 ORTHO05D005539 2.5e-151 539.3 349 75.4
Haze_07247 Corylus avellana HOM05D004497 ORTHO05D005539 2.5e-151 539.3 349 73.9
GSVIVG01013111001 Vitis vinifera HOM05D004497 ORTHO05D005539 9.3e-151 537.3 339 75.8
TWI14G0260 Tripterygium wilfordii HOM05D004497 ORTHO05D005539 1.3e-149 533.5 349 73.6
Cfa013402 Carpinus fangiana HOM05D004497 ORTHO05D005539 1.8e-149 533.1 349 73.1
Gorai.006G271300 Gossypium raimondii HOM05D004497 ORTHO05D005539 1.9e-148 529.6 348 72.7
TAR625G0069 Trochodendron aralioides HOM05D004497 ORTHO05D005539 1.9e-148 529.6 348 72.1
RcHm_v2.0_Chr7g0190661 Rosa chinensis HOM05D004497 ORTHO05D005539 3.3e-148 528.9 349 73.1
Gohir.A12G276900 Gossypium hirsutum HOM05D004497 ORTHO05D005539 5.7e-148 528.1 350 72.6
Gohir.A09G246200 Gossypium hirsutum HOM05D004497 ORTHO05D005539 7.4e-148 527.7 349 73.1
Gohir.D09G246800 Gossypium hirsutum HOM05D004497 ORTHO05D005539 3.1e-146 522.3 349 71.9
FvH4_5g07760 Fragaria vesca HOM05D004497 ORTHO05D005539 4.1e-146 521.9 349 72.5
CiPaw.08G116800 Carya illinoinensis HOM05D004497 ORTHO05D005539 6.9e-146 521.2 349 71.3
FAN18G2816 Fragaria x ananassa HOM05D004497 ORTHO05D005539 1.5e-145 520.0 349 72.2
Ciclev10020238m.g Citrus clementina HOM05D004497 ORTHO05D005539 2.0e-145 519.6 345 72.8
TAR629G1275 Trochodendron aralioides HOM05D004497 ORTHO05D005539 7.6e-145 517.7 348 70.1
CSS0032894 Camellia sinensis var. sinensis HOM05D004497 ORTHO05D005539 1.0e-144 517.3 350 70.9
Lj9A476T57 Lonicera japonica HOM05D004497 ORTHO05D005539 1.7e-144 516.5 339 73.2
Actinidia25597 Actinidia chinensis HOM05D004497 ORTHO05D005539 3.8e-144 515.4 349 70.5
FAN08G0052 Fragaria x ananassa HOM05D004497 ORTHO05D005539 5.0e-144 515.0 349 71.9
MD06G1147200 Malus domestica HOM05D004497 ORTHO05D005539 8.4e-144 514.2 340 73.2
FAN04G2053 Fragaria x ananassa HOM05D004497 ORTHO05D005539 2.5e-143 512.7 349 71.6
QL04p081834 Quercus lobata HOM05D004497 ORTHO05D005539 5.5e-143 511.5 339 72.3
QL10p004476 Quercus lobata HOM05D004497 ORTHO05D005539 1.6e-142 510.0 349 70.8
Rhsim08G0187300 Rhododendron simsii HOM05D004497 ORTHO05D005539 4.6e-142 508.4 349 69.6
MELO3C002347.2 Cucumis melo HOM05D004497 ORTHO05D005539 3.0e-141 505.8 339 71.1
CsaV3_1G009480 Cucumis sativus L. HOM05D004497 ORTHO05D005539 4.3e-140 501.9 345 69.6
MD14G1161100 Malus domestica HOM05D004497 ORTHO05D005539 4.3e-140 501.9 350 70.0
QL93p0225_0015 Quercus lobata HOM05D004497 ORTHO05D005539 4.3e-140 501.9 349 70.2
Nitab4.5_0000903g0080 Nicotiana tabacum HOM05D004497 ORTHO05D005539 1.6e-139 500.0 345 69.3
QL07p000007 Quercus lobata HOM05D004497 ORTHO05D005539 2.2e-139 499.6 349 69.9
ClCG03G003620 Citrullus lanatus HOM05D004497 ORTHO05D005539 2.8e-139 499.2 346 69.1
Nn4g26409 Nelumbo nucifera HOM05D004497 ORTHO05D005539 2.8e-139 499.2 339 69.9
CANSAT56G3508 Cannabis sativa HOM05D004497 ORTHO05D005539 8.2e-139 497.7 349 70.2
vmacro20468 Vaccinium macrocarpon HOM05D004497 ORTHO05D005539 1.1e-138 497.3 351 67.2
Dinv04858 Davidia involucrata HOM05D004497 ORTHO05D005539 1.8e-138 496.5 321 73.5
Nitab4.5_0002978g0150 Nicotiana tabacum HOM05D004497 ORTHO05D005539 1.8e-138 496.5 390 64.1
Lalb_Chr03g0040831 Lupinus albus HOM05D004497 ORTHO05D005539 3.1e-138 495.7 340 67.1
HanXRQChr05g0153981 Helianthus annuus HOM05D004497 ORTHO05D005539 1.5e-137 493.4 349 67.3
Lsat_1_v5_gn_5_13520 Lactuca sativa HOM05D004497 ORTHO05D005539 1.5e-137 493.4 349 69.1
Eucgr.C01065 Eucalyptus grandis HOM05D004497 ORTHO05D005539 1.3e-136 490.3 345 68.4
Sed0020059 Sechium edule HOM05D004497 ORTHO05D005539 3.8e-136 488.8 345 68.4
FAN13G1359 Fragaria x ananassa HOM05D004497 ORTHO05D005539 8.5e-136 487.6 321 73.2
Dinv11148 Davidia involucrata HOM05D004497 ORTHO05D005539 1.1e-135 487.3 325 73.8
Eucgr.K00186 Eucalyptus grandis HOM05D004497 ORTHO05D005539 3.2e-135 485.7 345 65.8
Psat3g028160 Pisum sativum HOM05D004497 ORTHO05D005539 3.2e-135 485.7 347 67.1
Glyma.16G034400 Glycine max HOM05D004497 ORTHO05D005539 7.2e-135 484.6 349 66.8
PGR083G2085 Punica granatum HOM05D004497 ORTHO05D005539 7.2e-135 484.6 346 67.6
Peaxi162Scf00078g00424 Petunia axillaris HOM05D004497 ORTHO05D005539 9.4e-135 484.2 339 67.6
Ca_09070_v3 Cicer arietinum L. HOM05D004497 ORTHO05D005539 1.6e-134 483.4 348 66.4
ECA246G4485 Erigeron canadensis HOM05D004497 ORTHO05D005539 1.6e-134 483.4 345 67.2
Sc10g0010400 Simmondsia chinensis HOM05D004497 ORTHO05D005539 2.1e-134 483.0 345 66.7
Phvul.003G017500 Phaseolus vulgaris HOM05D004497 ORTHO05D005539 2.7e-134 482.6 385 62.1
Ca_04603_v3 Cicer arietinum L. HOM05D004497 ORTHO05D005539 4.6e-134 481.9 348 66.7
TPR.G34454 Trifolium pratense HOM05D004497 ORTHO05D005539 7.9e-134 481.1 348 66.1
Lj1g0020744 Lotus japonicus HOM05D004497 ORTHO05D005539 1.0e-133 480.7 339 68.4
PGSC0003DMG400005828 Solanum tuberosum HOM05D004497 ORTHO05D005539 1.0e-133 480.7 361 66.5
Glyma.07G068400 Glycine max HOM05D004497 ORTHO05D005539 2.3e-133 479.6 351 67.0
Sopen08g004010 Solanum pennellii HOM05D004497 ORTHO05D005539 3.9e-133 478.8 361 66.2
Solyc08g008160.4 Solanum lycopersicum HOM05D004497 ORTHO05D005539 8.8e-133 477.6 361 66.2
arahy.Tifrunner.gnm1.ann1.0L2FVX Arachis hypogaea HOM05D004497 ORTHO05D005539 2.5e-132 476.1 348 65.5
VMungo0331G1674 Vigna mungo HOM05D004497 ORTHO05D005539 2.5e-132 476.1 349 64.2
Migut.I00519 Erythranthe guttata HOM05D004497 ORTHO05D005539 3.3e-132 475.7 395 62.3
SGA_v2.0_scaffold215G42316 Striga asiatica HOM05D004497 ORTHO05D005539 4.3e-132 475.3 346 65.9
arahy.Tifrunner.gnm1.ann1.16KDXT Arachis hypogaea HOM05D004497 ORTHO05D005539 9.7e-132 474.2 348 64.9
MBI11_g15865_MAGBIO Magnolia biondii HOM05D004497 ORTHO05D005539 4.8e-131 471.9 379 59.9
Aqoxy5G03475 Aquilegia oxysepala HOM05D004497 ORTHO05D005539 1.4e-130 470.3 351 64.7
Medtr7g106650 Medicago truncatula HOM05D004497 ORTHO05D005539 5.3e-130 468.4 348 64.9
Ah.08g212900 Amaranthus hybridus HOM05D004497 ORTHO05D005539 6.9e-130 468.0 352 65.6
Hund03342 Selenicereus undatus HOM05D004497 ORTHO05D005539 6.9e-130 468.0 349 64.8
THA.LOC104820611 Tarenaya hassleriana HOM05D004497 ORTHO05D005539 6.9e-130 468.0 345 64.1
SalBow8G1477 Salvia bowleyana HOM05D004497 ORTHO05D005539 1.3e-128 463.8 399 60.2
THA.LOC104814264 Tarenaya hassleriana HOM05D004497 ORTHO05D005539 2.2e-128 463.0 345 63.5
EL10As4g23444 Beta vulgaris HOM05D004497 ORTHO05D005539 2.9e-128 462.6 349 64.8
MSTRG.22910 Avicennia marina HOM05D004497 ORTHO05D005539 1.9e-127 459.9 340 66.2
TWI39G1139 Tripterygium wilfordii HOM05D004497 ORTHO05D005539 1.2e-126 457.2 382 62.6
PSO782G0077 Papaver somniferum HOM05D004497 ORTHO05D005539 1.6e-126 456.8 362 63.3
PSO063G4711 Papaver somniferum HOM05D004497 ORTHO05D005539 3.6e-126 455.7 362 63.3
Oeu005018.3 Olea europaea HOM05D004497 ORTHO05D005539 6.1e-126 454.9 386 59.1
Thhalv10007651m.g Eutrema salsugineum HOM05D004497 ORTHO05D005539 1.8e-125 453.4 345 62.0
C03p75750 Brassica napus HOM05D004497 ORTHO05D005539 3.0e-125 452.6 345 62.3
A08p25140 Brassica napus HOM05D004497 ORTHO05D005539 3.9e-125 452.2 345 62.3
BolC3t19835H Brassica oleracea HOM05D004497 ORTHO05D005539 6.7e-125 451.4 345 62.3
Sp1g25270 Schrenkiella parvula HOM05D004497 ORTHO05D005539 6.7e-125 451.4 345 61.7
SalBow5G0098 Salvia bowleyana HOM05D004497 ORTHO05D005539 1.5e-124 450.3 424 55.4
SalBow5G4825 Salvia bowleyana HOM05D004497 ORTHO05D005539 1.5e-124 450.3 424 55.4
CDE08G0729 Ceratophyllum demersum HOM05D004497 ORTHO05D005539 3.3e-124 449.1 346 61.8
BcaC01g00099 Brassica carinata HOM05D004497 ORTHO05D005539 4.4e-124 448.7 345 62.0
BraA09t39216Z Brassica rapa HOM05D004497 ORTHO05D005539 1.3e-123 447.2 345 61.4
BcaB03g12154 Brassica carinata HOM05D004497 ORTHO05D005539 1.7e-123 446.8 346 61.6
Cc05_g04600 Coffea canephora HOM05D004497 ORTHO05D005539 6.3e-123 444.9 345 60.9
Duzib068G0683 Durio zibethinus HOM05D004497 ORTHO05D005539 6.3e-123 444.9 290 73.8
AL1G43130 Arabidopsis lyrata HOM05D004497 ORTHO05D005539 9.1e-122 441.0 345 60.9
AT1G29320 Arabidopsis thaliana HOM05D004497 ORTHO05D005539 2.0e-121 439.9 345 60.6
CARHR028640 Cardamine hirsuta HOM05D004497 ORTHO05D005539 2.0e-121 439.9 345 60.6
Aa31LG6G6220 Aethionema arabicum HOM05D004497 ORTHO05D005539 2.6e-121 439.5 343 61.2
BcaB07g32523 Brassica carinata HOM05D004497 ORTHO05D005539 6.5e-120 434.9 347 60.8
BraA08t34469Z Brassica rapa HOM05D004497 ORTHO05D005539 1.5e-119 433.7 372 57.8
BcaC05g26958 Brassica carinata HOM05D004497 ORTHO05D005539 5.5e-119 431.8 345 59.7
C05p28100 Brassica napus HOM05D004497 ORTHO05D005539 5.5e-119 431.8 345 59.7
BolC5t31537H Brassica oleracea HOM05D004497 ORTHO05D005539 5.5e-119 431.8 345 59.7
A09p36980 Brassica napus HOM05D004497 ORTHO05D005539 7.2e-119 431.4 345 59.1
Prupe.1G584300 Prunus persica HOM05D004497 ORTHO05D005539 2.1e-118 429.9 340 64.1
Carub.0001s2754 Capsella rubella HOM05D004497 ORTHO05D005539 6.1e-118 428.3 400 53.0
Cpa.g.sc166.23 Carica papaya HOM05D004497 ORTHO05D005539 5.2e-117 425.2 291 68.4
SHI10599 Sapria himalayana HOM05D004497 ORTHO05D005539 6.7e-117 424.9 378 56.9
Cfa014010 Carpinus fangiana HOM05D004497 ORTHO05D005539 5.7e-116 421.8 341 62.5
ATR0171G018 Amborella trichopoda HOM05D004497 ORTHO05D005539 4.8e-115 418.7 348 57.5
Sabra12G0069700 Salix brachista HOM05D004497 ORTHO05D005539 2.4e-114 416.4 297 67.7
HPP92_023861 Vanilla planifolia HOM05D004497 ORTHO05D005539 2.5e-111 406.4 346 56.6
CiPaw.11G010200 Carya illinoinensis HOM05D004497 ORTHO05D005539 5.5e-111 405.2 275 71.6
Zm00001eb105680 Zea mays HOM05D004497 ORTHO05D005539 5.2e-109 398.7 348 58.0
DCAR_012679 Daucus carota HOM05D004497 ORTHO05D005539 6.8e-109 398.3 338 59.2
SEGI_30468 Sequoiadendron giganteum HOM05D004497 ORTHO05D005539 4.1e-106 389.0 341 52.5
AUR62025903 Chenopodium quinoa HOM05D004497 ORTHO05D005539 5.4e-106 388.7 349 56.4
AUR62025086 Chenopodium quinoa HOM05D004497 ORTHO05D005539 4.5e-105 385.6 340 57.6
Aqoxy5G03495 Aquilegia oxysepala HOM05D004497 ORTHO05D005539 2.8e-99 366.3 293 61.1
Sed0003097 Sechium edule HOM05D004497 ORTHO05D005539 2.5e-95 353.2 237 69.2
AUR62032705 Chenopodium quinoa HOM05D004497 ORTHO05D005539 6.8e-93 345.1 415 46.5
unitig_699.g19657 Utricularia gibba HOM05D004497 ORTHO05D005539 7.3e-87 325.1 386 48.2
AUR62025094 Chenopodium quinoa HOM05D004497 ORTHO05D005539 2.8e-86 323.2 288 55.6
Mapoly0079s0016 Marchantia polymorpha HOM05D004497 ORTHO05D005539 4.0e-85 319.3 339 46.9
Os07g0506700 Oryza sativa ssp. japonica HOM05D004497 ORTHO05D005539 4.0e-85 319.3 294 55.4
Pp3c13_24500 Physcomitrium patens HOM05D004497 ORTHO05D005539 8.9e-85 318.2 359 46.0
SMO165G0173 Selaginella moellendorffii HOM05D004497 ORTHO05D005539 1.2e-78 297.7 341 46.0
Nitab4.5_0003013g0030 Nicotiana tabacum HOM05D004497 ORTHO05D005539 2.9e-75 286.6 382 45.8
vmacro19222 Vaccinium macrocarpon HOM05D004497 ORTHO05D005539 4.4e-68 262.7 328 46.6
Zm00001eb322320 Zea mays HOM05D004497 ORTHO05D005539 3.3e-63 246.5 203 59.1
Actinidia19491 Actinidia chinensis HOM05D004497 ORTHO05D005539 6.4e-59 232.3 380 40.0
AagrBONN_evm.TU.Sc2ySwM_344.3271 Anthoceros agrestis HOM05D000006 ORTHO05D004030 7.1e-58 228.8 298 42.6
AUR62029644 Chenopodium quinoa HOM05D004497 ORTHO05D005539 5.1e-56 222.6 228 52.2
RcHm_v2.0_Chr0c30g0501231 Rosa chinensis HOM05D004497 ORTHO05D005539 8.1e-54 215.3 346 40.2
RcHm_v2.0_Chr3g0452771 Rosa chinensis HOM05D004497 ORTHO05D005539 8.1e-54 215.3 346 40.2
Ca_16680_v3 Cicer arietinum L. HOM05D000160 ORTHO05D000496 7.1e-50 202.2 127 70.9
AUR62025088 Chenopodium quinoa HOM05D004497 ORTHO05D005539 3.3e-47 193.4 227 45.4
CBR_g31949 Chara braunii HOM05D004497 ORTHO05D005539 1.3e-43 181.4 341 35.8
RcHm_v2.0_Chr5g0041021 Rosa chinensis HOM05D004497 ORTHO05D005539 9.3e-42 175.3 349 35.5
SalBow8G1815 Salvia bowleyana HOM05D004497 ORTHO05D005539 1.2e-41 174.9 164 61.6
AUR62025079 Chenopodium quinoa HOM05D004497 ORTHO05D005539 7.6e-36 155.6 157 50.3
Gohir.D13G181701 Gossypium hirsutum HOM05D004497 ORTHO05D005539 3.8e-27 126.7 105 60.0
MCO03G018 Micromonas commoda HOM05D004497 ORTHO05D005539 2.5e-23 114.0 387 27.1
Cre17.g718650 Chlamydomonas reinhardtii HOM05D004497 ORTHO05D005539 7.4e-23 112.5 389 27.0
TAR371G1248 Trochodendron aralioides HOM05D004497 ORTHO05D005539 4.8e-22 109.8 124 50.0
Oeu006698.1 Olea europaea HOM05D004497 ORTHO05D005539 6.7e-16 89.4 71 62.0
AUR62025092 Chenopodium quinoa HOM05D004497 ORTHO05D005539 1.5e-15 88.2 53 75.5
PRCOL_00003967 Prasinoderma coloniale HOM05D004497 ORTHO05D005539 1.3e-14 85.1 165 32.7
Phvul.003G017700 Phaseolus vulgaris HOM05D004497 ORTHO05D005539 2.2e-11 74.3 75 52.0
C04p39580 Brassica napus HOM05D004497 ORTHO05D005539 2.5e-10 70.9 51 64.7
BolC4t25523H Brassica oleracea HOM05D004497 ORTHO05D005539 2.5e-10 70.9 51 64.7
COL.COLO4_36170 Corchorus olitorius HOM05D021494 ORTHO05D022415 1.8e-08 64.7 41 73.2


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