Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.14G044300 Manihot esculenta HOM05D002266 ORTHO05D010337 8.0e-236 820.1 424 100.0
Hma1.2p1_0452F.1_g155980 Hydrangea macrophylla HOM05D002266 ORTHO05D010337 1.0e-110 404.4 428 54.4
Duzib205G1981 Durio zibethinus HOM05D002266 ORTHO05D010337 2.2e-108 396.7 421 53.7
Gohir.A07G046600 Gossypium hirsutum HOM05D002266 ORTHO05D010337 4.1e-107 392.5 424 54.0
Gorai.001G054000 Gossypium raimondii HOM05D002266 ORTHO05D010337 1.6e-106 390.6 424 53.5
Gohir.D07G050900 Gossypium hirsutum HOM05D002266 ORTHO05D010337 4.5e-106 389.0 424 53.3
TWI23G1291 Tripterygium wilfordii HOM05D002266 ORTHO05D010337 3.8e-105 386.0 422 53.6
Sabra12G0079800 Salix brachista HOM05D002266 ORTHO05D010337 4.0e-102 375.9 427 50.6
Thecc.03G141000 Theobroma cacao HOM05D002266 ORTHO05D010337 2.0e-101 373.6 427 52.0
Potri.012G108900 Populus trichocarpa HOM05D002266 ORTHO05D010337 3.4e-101 372.9 418 50.7
Lj5C86T8 Lonicera japonica HOM05D002266 ORTHO05D010337 1.8e-99 367.1 419 50.1
Atru.chr6.1922 Acer truncatum HOM05D002266 ORTHO05D010337 2.7e-98 363.2 435 53.3
Atru.chr6.1924 Acer truncatum HOM05D002266 ORTHO05D010337 2.7e-98 363.2 435 53.3
Ciclev10033782m.g Citrus clementina HOM05D002266 ORTHO05D010337 2.1e-95 353.6 428 49.5
Rhsim08G0198000 Rhododendron simsii HOM05D002266 ORTHO05D010337 3.6e-95 352.8 460 47.0
QL10p000420 Quercus lobata HOM05D002266 ORTHO05D010337 9.5e-88 328.2 419 47.7
DCAR_025647 Daucus carota HOM05D002266 ORTHO05D010337 3.9e-81 306.2 412 44.7
COL.COLO4_37262 Corchorus olitorius HOM05D002266 ORTHO05D010337 1.4e-75 287.7 306 53.9
Prupe.5G140800 Prunus persica HOM05D002266 ORTHO05D010337 2.4e-75 287.0 423 43.5
Aqoxy3G02681 Aquilegia oxysepala HOM05D002266 ORTHO05D010337 7.1e-75 285.4 432 41.9
Migut.D01181 Erythranthe guttata HOM05D002266 ORTHO05D010337 7.8e-74 282.0 423 42.6
HanXRQChr05g0155381 Helianthus annuus HOM05D002266 ORTHO05D010337 1.7e-73 280.8 375 45.3
Cc04_g05840 Coffea canephora HOM05D002266 ORTHO05D010337 3.3e-72 276.6 429 42.9
RcHm_v2.0_Chr7g0188601 Rosa chinensis HOM05D002266 ORTHO05D010337 1.4e-70 271.2 416 42.5
FvH4_5g09640 Fragaria vesca HOM05D002266 ORTHO05D010337 2.4e-70 270.4 404 43.3
Peaxi162Scf00135g01413 Petunia axillaris HOM05D002266 ORTHO05D010337 4.0e-70 269.6 420 42.4
Nitab4.5_0008403g0020 Nicotiana tabacum HOM05D002266 ORTHO05D010337 1.5e-69 267.7 421 42.0
AT5G61865 Arabidopsis thaliana HOM05D002266 ORTHO05D010337 3.4e-69 266.5 410 40.0
Lsat_1_v5_gn_5_10020 Lactuca sativa HOM05D002266 ORTHO05D010337 4.4e-69 266.2 414 39.6
Solyc12g042340.2 Solanum lycopersicum HOM05D002266 ORTHO05D010337 4.4e-69 266.2 404 43.3
SGA_v2.0_scaffold74G24650 Striga asiatica HOM05D002266 ORTHO05D010337 4.4e-69 266.2 402 39.8
BcaC01g02442 Brassica carinata HOM05D002266 ORTHO05D010337 7.6e-69 265.4 412 41.3
C03p65250 Brassica napus HOM05D002266 ORTHO05D010337 7.6e-69 265.4 412 41.3
BolC3t18778H Brassica oleracea HOM05D002266 ORTHO05D010337 7.6e-69 265.4 412 41.3
Carub.0008s2256 Capsella rubella HOM05D002266 ORTHO05D010337 7.6e-69 265.4 417 40.3
FAN04G1258 Fragaria x ananassa HOM05D002266 ORTHO05D010337 3.8e-68 263.1 404 42.1
BraA06t25800Z Brassica rapa HOM05D002266 ORTHO05D010337 4.9e-68 262.7 413 40.7
AL8G38630 Arabidopsis lyrata HOM05D002266 ORTHO05D010337 6.4e-68 262.3 405 40.7
A06p28540 Brassica napus HOM05D002266 ORTHO05D010337 1.1e-67 261.5 411 40.6
BcaB02g09608 Brassica carinata HOM05D002266 ORTHO05D010337 1.9e-67 260.8 414 41.3
Thhalv10005642m.g Eutrema salsugineum HOM05D002266 ORTHO05D010337 2.4e-67 260.4 392 41.3
Nitab4.5_0002584g0010 Nicotiana tabacum HOM05D002266 ORTHO05D010337 2.4e-67 260.4 418 42.3
Actinidia25516 Actinidia chinensis HOM05D002266 ORTHO05D010337 1.2e-66 258.1 302 49.3
Sp2g25060 Schrenkiella parvula HOM05D002266 ORTHO05D010337 2.1e-66 257.3 405 40.2
CARHR275630 Cardamine hirsuta HOM05D002266 ORTHO05D010337 3.5e-66 256.5 411 39.2
Sopen12g021270 Solanum pennellii HOM05D002266 ORTHO05D010337 2.3e-65 253.8 416 41.1
THA.LOC104818284 Tarenaya hassleriana HOM05D002266 ORTHO05D010337 9.6e-64 248.4 392 40.1
MD14G1146800 Malus domestica HOM05D002266 ORTHO05D010337 1.4e-62 244.6 379 40.6
SalBow1G8312 Salvia bowleyana HOM05D002266 ORTHO05D010337 5.8e-61 239.2 410 39.5
FAN18G2616 Fragaria x ananassa HOM05D002266 ORTHO05D010337 2.2e-60 237.3 373 42.4
Aa31LG11G1630 Aethionema arabicum HOM05D002266 ORTHO05D010337 1.1e-59 235.0 389 39.1
Oeu013660.2 Olea europaea HOM05D002266 ORTHO05D010337 4.2e-59 233.0 369 42.0
Cpa.g.sc13.178 Carica papaya HOM05D002266 ORTHO05D010337 3.5e-58 229.9 250 52.8
Dinv13716 Davidia involucrata HOM05D002266 ORTHO05D010337 2.5e-56 223.8 200 63.0
MBI07_g35979_MAGBIO Magnolia biondii HOM05D002266 ORTHO05D010337 3.3e-56 223.4 321 44.5
PSO339G3582 Papaver somniferum HOM05D002266 ORTHO05D010337 1.3e-55 221.5 431 36.7
unitig_747.g21318 Utricularia gibba HOM05D002266 ORTHO05D010337 2.1e-55 220.7 400 37.0
FAN13G2170 Fragaria x ananassa HOM05D002266 ORTHO05D010337 1.5e-53 214.5 369 38.5
FAN08G1259 Fragaria x ananassa HOM05D002266 ORTHO05D010337 2.4e-46 190.7 373 37.3
PGSC0003DMG400014448 Solanum tuberosum HOM05D002266 ORTHO05D010337 3.2e-43 180.3 334 38.3
SEGI_02612 Sequoiadendron giganteum HOM05D002266 ORTHO05D000002 2.3e-17 94.4 347 25.9
Cpa.g.sc13.177 Carica papaya HOM05D002266 ORTHO05D010337 7.0e-14 82.8 187 34.8
Sabra13G0033600 Salix brachista HOM05D002266 ORTHO05D010337 6.5e-12 76.3 90 51.1


User provided reference genes

Program Settings