Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.14G038500 Manihot esculenta HOM05D006663 ORTHO05D008269 2.2e-284 981.5 458 100.0
GSVIVG01013975001 Vitis vinifera HOM05D006663 ORTHO05D008269 4.1e-262 907.5 459 91.7
Thecc.03G149200 Theobroma cacao HOM05D006663 ORTHO05D008269 5.4e-262 907.1 459 91.9
COL.COLO4_37343 Corchorus olitorius HOM05D006663 ORTHO05D008269 7.0e-262 906.7 459 91.7
Potri.003G151400 Populus trichocarpa HOM05D006663 ORTHO05D008269 9.1e-262 906.4 459 91.7
Cpa.g.sc13.257 Carica papaya HOM05D006663 ORTHO05D008269 1.3e-260 902.5 459 90.8
TWI39G0071 Tripterygium wilfordii HOM05D006663 ORTHO05D008269 1.7e-260 902.1 459 90.8
ClCG01G004680 Citrullus lanatus HOM05D006663 ORTHO05D008269 9.4e-259 896.3 459 88.5
Gorai.008G214300 Gossypium raimondii HOM05D006663 ORTHO05D008269 9.4e-259 896.3 459 91.1
Sed0007931 Sechium edule HOM05D006663 ORTHO05D008269 2.1e-258 895.2 459 89.1
Gohir.A12G196700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 2.7e-258 894.8 459 90.6
arahy.Tifrunner.gnm1.ann1.JS0B2B Arachis hypogaea HOM05D006663 ORTHO05D008269 8.0e-258 893.3 459 90.4
FvH4_7g26970 Fragaria vesca HOM05D006663 ORTHO05D008269 8.0e-258 893.3 460 90.7
arahy.Tifrunner.gnm1.ann1.78X8E3 Arachis hypogaea HOM05D006663 ORTHO05D008269 4.0e-257 891.0 459 90.0
FAN06G2606 Fragaria x ananassa HOM05D006663 ORTHO05D008269 2.0e-256 888.6 461 90.5
CiPaw.07G185300 Carya illinoinensis HOM05D006663 ORTHO05D008269 2.6e-256 888.3 461 90.0
MD07G1249200 Malus domestica HOM05D006663 ORTHO05D008269 2.6e-256 888.3 460 89.8
Hma1.2p1_1580F.1_g291900 Hydrangea macrophylla HOM05D006663 ORTHO05D008269 4.4e-256 887.5 459 89.1
FAN06G1593 Fragaria x ananassa HOM05D006663 ORTHO05D008269 2.8e-255 884.8 461 90.2
Sabra03G0109600 Salix brachista HOM05D006663 ORTHO05D008269 2.8e-255 884.8 481 86.7
RcHm_v2.0_Chr1g0373701 Rosa chinensis HOM05D006663 ORTHO05D008269 4.9e-255 884.0 461 89.8
Lj5g0020638 Lotus japonicus HOM05D006663 ORTHO05D008269 6.3e-255 883.6 459 90.0
Actinidia13608 Actinidia chinensis HOM05D006663 ORTHO05D008269 8.3e-255 883.2 460 88.9
Atru.chr1.907 Acer truncatum HOM05D006663 ORTHO05D008269 2.4e-254 881.7 460 89.1
Lalb_Chr02g0150831 Lupinus albus HOM05D006663 ORTHO05D008269 5.4e-254 880.6 459 89.5
Eucgr.A02922 Eucalyptus grandis HOM05D006663 ORTHO05D008269 7.0e-254 880.2 461 89.4
QL09p027994 Quercus lobata HOM05D006663 ORTHO05D008269 7.0e-254 880.2 475 85.7
VMungo0720G2856 Vigna mungo HOM05D006663 ORTHO05D008269 7.0e-254 880.2 459 88.9
Phvul.007G136100 Phaseolus vulgaris HOM05D006663 ORTHO05D008269 2.0e-253 878.6 459 89.3
Glyma.20G195600 Glycine max HOM05D006663 ORTHO05D008269 2.7e-253 878.2 459 88.7
CsaV3_5G004880 Cucumis sativus L. HOM05D006663 ORTHO05D008269 7.7e-253 876.7 459 86.9
Potri.001G079100 Populus trichocarpa HOM05D006663 ORTHO05D008269 1.0e-252 876.3 459 89.3
MD01G1177500 Malus domestica HOM05D006663 ORTHO05D008269 1.3e-252 875.9 461 88.9
Rhsim03G0161500 Rhododendron simsii HOM05D006663 ORTHO05D008269 6.6e-252 873.6 460 87.8
CANSAT56G2550 Cannabis sativa HOM05D006663 ORTHO05D008269 1.1e-251 872.8 460 88.5
MELO3C005467.2 Cucumis melo HOM05D006663 ORTHO05D008269 5.6e-251 870.5 459 86.7
CSS0030206 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 1.5e-248 862.4 460 87.2
CSS0049195 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 1.5e-248 862.4 460 87.2
TAR636G2266 Trochodendron aralioides HOM05D006663 ORTHO05D008269 2.0e-248 862.1 460 86.5
A10p29330 Brassica napus HOM05D006663 ORTHO05D008269 2.6e-248 861.7 459 84.7
Sabra01G0056700 Salix brachista HOM05D006663 ORTHO05D008269 1.7e-247 859.0 459 87.8
C09p69700 Brassica napus HOM05D006663 ORTHO05D008269 2.9e-247 858.2 459 84.5
BolC9t59713H Brassica oleracea HOM05D006663 ORTHO05D008269 2.9e-247 858.2 459 84.5
CANSAT56G3894 Cannabis sativa HOM05D006663 ORTHO05D008269 2.4e-246 855.1 459 87.4
Sc10g0004730 Simmondsia chinensis HOM05D006663 ORTHO05D008269 5.4e-246 854.0 460 85.9
BcaC06g32493 Brassica carinata HOM05D006663 ORTHO05D008269 1.6e-245 852.4 459 83.9
Medtr1g090310 Medicago truncatula HOM05D006663 ORTHO05D008269 1.6e-245 852.4 459 86.7
THA.LOC104801603 Tarenaya hassleriana HOM05D006663 ORTHO05D008269 2.0e-245 852.0 460 83.7
Psat0s1505g0040 Pisum sativum HOM05D006663 ORTHO05D008269 2.7e-245 851.7 459 85.8
Lj1C976T20 Lonicera japonica HOM05D006663 ORTHO05D008269 3.9e-244 847.8 460 85.4
Aqoxy7G00844 Aquilegia oxysepala HOM05D006663 ORTHO05D008269 2.8e-242 841.6 460 84.1
CARHR205560 Cardamine hirsuta HOM05D006663 ORTHO05D008269 1.8e-241 839.0 459 82.6
MSTRG.8846 Avicennia marina HOM05D006663 ORTHO05D008269 3.1e-241 838.2 460 83.9
Thhalv10013487m.g Eutrema salsugineum HOM05D006663 ORTHO05D008269 5.2e-241 837.4 459 82.8
HanXRQChr05g0138181 Helianthus annuus HOM05D006663 ORTHO05D008269 1.2e-240 836.3 461 83.7
AL6G17900 Arabidopsis lyrata HOM05D006663 ORTHO05D008269 4.9e-239 830.9 459 82.1
AT5G07590 Arabidopsis thaliana HOM05D006663 ORTHO05D008269 4.9e-239 830.9 459 82.4
Carub.0006s0657 Capsella rubella HOM05D006663 ORTHO05D008269 4.9e-239 830.9 459 81.9
Lsat_1_v5_gn_8_9600 Lactuca sativa HOM05D006663 ORTHO05D008269 1.9e-238 828.9 461 83.1
Prupe.2G272800 Prunus persica HOM05D006663 ORTHO05D008269 4.1e-238 827.8 458 84.9
ECA233G2092 Erigeron canadensis HOM05D006663 ORTHO05D008269 1.6e-237 825.9 458 82.5
Oeu042534.1 Olea europaea HOM05D006663 ORTHO05D008269 2.0e-237 825.5 460 83.0
Migut.F00523 Erythranthe guttata HOM05D006663 ORTHO05D008269 4.6e-237 824.3 460 82.6
DCAR_020172 Daucus carota HOM05D006663 ORTHO05D008269 7.8e-237 823.5 459 83.0
Sp6g35280 Schrenkiella parvula HOM05D006663 ORTHO05D008269 1.0e-236 823.2 459 81.7
ATR0057G058 Amborella trichopoda HOM05D006663 ORTHO05D008269 6.2e-234 813.9 462 80.7
Ciclev10004937m.g Citrus clementina HOM05D006663 ORTHO05D008269 2.3e-233 812.0 459 83.2
SGA_v2.0_scaffold60G20812 Striga asiatica HOM05D006663 ORTHO05D008269 5.2e-233 810.8 460 81.7
PSO675G3877 Papaver somniferum HOM05D006663 ORTHO05D008269 8.9e-233 810.1 455 82.0
Glyma.10G194400 Glycine max HOM05D006663 ORTHO05D008269 2.0e-232 808.9 458 82.5
Aa31LG3G18830 Aethionema arabicum HOM05D006663 ORTHO05D008269 3.4e-232 808.1 486 76.7
Hund24931 Selenicereus undatus HOM05D006663 ORTHO05D008269 2.7e-229 798.5 458 79.9
Cc02_g04690 Coffea canephora HOM05D006663 ORTHO05D008269 6.6e-228 793.9 460 79.6
TPR.G13385 Trifolium pratense HOM05D006663 ORTHO05D008269 8.6e-228 793.5 497 76.9
PSO732G0765 Papaver somniferum HOM05D006663 ORTHO05D008269 1.1e-227 793.1 443 81.9
PGSC0003DMG400010747 Solanum tuberosum HOM05D006663 ORTHO05D008269 1.1e-227 793.1 460 80.9
EL10Ac7g15901 Beta vulgaris HOM05D006663 ORTHO05D008269 1.5e-227 792.7 459 79.3
Sopen03g024320 Solanum pennellii HOM05D006663 ORTHO05D008269 2.5e-227 792.0 460 81.1
Nn1g00884 Nelumbo nucifera HOM05D006663 ORTHO05D008269 7.6e-224 780.4 460 80.7
AUR62009686 Chenopodium quinoa HOM05D006663 ORTHO05D008269 1.3e-220 769.6 459 76.9
Os10g0563300 Oryza sativa ssp. japonica HOM05D006663 ORTHO05D008269 1.8e-217 759.2 464 75.4
SEGI_30026 Sequoiadendron giganteum HOM05D006663 ORTHO05D008269 9.9e-216 753.4 458 75.8
SHI14080 Sapria himalayana HOM05D006663 ORTHO05D008269 3.0e-212 741.9 497 71.4
PGR042G0458 Punica granatum HOM05D006663 ORTHO05D008269 7.1e-206 720.7 458 76.4
AUR62001890 Chenopodium quinoa HOM05D006663 ORTHO05D008269 3.3e-203 711.8 459 72.3
HPP92_025692 Vanilla planifolia HOM05D006663 ORTHO05D008269 6.5e-191 671.0 393 78.6
Pp3c13_8720 Physcomitrium patens HOM05D006663 ORTHO05D008269 4.6e-189 664.8 449 66.4
Pp3c3_11450 Physcomitrium patens HOM05D006663 ORTHO05D008269 1.1e-187 660.2 449 66.1
SMO340G0268 Selaginella moellendorffii HOM05D006663 ORTHO05D008269 1.9e-187 659.4 454 66.3
FAN10G3253 Fragaria x ananassa HOM05D006663 ORTHO05D008269 1.3e-186 656.8 338 91.1
Haze_22195 Corylus avellana HOM05D006663 ORTHO05D008269 3.7e-186 655.2 340 89.7
Gohir.D09G034800 Gossypium hirsutum HOM05D006663 ORTHO05D008269 7.6e-184 647.5 338 89.3
Gohir.A09G080000 Gossypium hirsutum HOM05D006663 ORTHO05D008269 2.9e-183 645.6 338 89.1
FAN03G0477 Fragaria x ananassa HOM05D006663 ORTHO05D008269 8.5e-183 644.0 338 89.9
Pp3c9_7850 Physcomitrium patens HOM05D006663 ORTHO05D008269 5.5e-182 641.3 456 64.9
Ca_10369_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 4.6e-181 638.3 341 88.6
Ca_10419_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 4.6e-181 638.3 341 88.6
Mapoly0178s0015 Marchantia polymorpha HOM05D006663 ORTHO05D008269 2.7e-173 612.5 465 59.6
Dinv06596 Davidia involucrata HOM05D006663 ORTHO05D008269 1.0e-172 610.5 323 87.9
vmacro06835 Vaccinium macrocarpon HOM05D006663 ORTHO05D008269 8.8e-172 607.4 338 84.3
Gohir.D04G037700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 8.2e-170 600.9 317 87.1
SalBow3G3051 Salvia bowleyana HOM05D006663 ORTHO05D008269 8.2e-170 600.9 337 82.8
CBR_g49329 Chara braunii HOM05D006663 ORTHO05D008269 2.6e-163 579.3 453 57.6
Nitab4.5_0007080g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 1.1e-161 573.9 337 79.8
Gohir.D12G199100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 9.1e-153 544.3 290 89.0
Nitab4.5_0021979g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 3.0e-148 529.3 300 81.3
SalBow3G2644 Salvia bowleyana HOM05D006663 ORTHO05D008269 3.7e-146 522.3 291 83.2
Solyc03g093490.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 2.4e-145 519.6 300 81.3
Peaxi162Scf00271g00618 Petunia axillaris HOM05D006663 ORTHO05D008269 4.5e-144 515.4 337 74.5
Zm00001eb325360 Zea mays HOM05D006663 ORTHO05D008269 5.2e-140 501.9 277 81.9
AagrBONN_evm.TU.Sc2ySwM_228.1080 Anthoceros agrestis HOM05D006663 ORTHO05D008269 2.3e-135 486.5 338 64.5
CDE09G0338 Ceratophyllum demersum HOM05D006663 ORTHO05D008269 1.0e-127 461.1 280 77.1
PRCOL_00004773 Prasinoderma coloniale HOM05D006663 ORTHO05D008269 9.5e-110 401.4 449 42.8
Cre13.g567150 Chlamydomonas reinhardtii HOM05D006663 ORTHO05D008269 4.2e-97 359.4 484 38.0
Solyc03g093500.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 2.9e-74 283.5 168 77.4
Gohir.A03G137100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 5.9e-59 232.6 110 95.5
Gohir.A07G166700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 5.9e-59 232.6 110 95.5
Gohir.A09G003500 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.3e-58 231.5 110 94.5
SHI00707 Sapria himalayana HOM05D006663 ORTHO05D008269 3.1e-52 210.3 163 62.6
Atru.chr4.2082 Acer truncatum HOM05D006663 ORTHO05D008269 2.6e-38 164.1 99 78.8
BcaC06g32421 Brassica carinata HOM05D006663 ORTHO05D008269 1.1e-12 79.0 40 87.5


User provided reference genes

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