Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.14G032600 Manihot esculenta HOM05D007548 ORTHO05D009527 1.0e-151 540.0 278 100.0
Manes.06G138600 Manihot esculenta HOM05D007548 ORTHO05D009527 1.2e-78 297.4 277 62.1
Potri.015G132000 Populus trichocarpa HOM05D007548 ORTHO05D009527 7.0e-55 218.4 283 51.6
Haze_13820 Corylus avellana HOM05D007548 ORTHO05D009527 3.7e-48 196.1 286 47.2
Atru.chr1.619 Acer truncatum HOM05D007548 ORTHO05D009527 4.8e-48 195.7 279 49.1
Duzib068G0425 Durio zibethinus HOM05D007548 ORTHO05D009527 8.2e-48 194.9 285 47.4
Thecc.03G162900 Theobroma cacao HOM05D007548 ORTHO05D009527 8.2e-48 194.9 288 46.5
CiPaw.03G097400 Carya illinoinensis HOM05D007548 ORTHO05D009527 7.7e-46 188.3 284 47.5
Ciclev10007148m.g Citrus clementina HOM05D007548 ORTHO05D009527 1.6e-43 180.6 271 46.9
Gohir.D12G264100 Gossypium hirsutum HOM05D007548 ORTHO05D009527 6.1e-43 178.7 278 43.9
Cfa008236 Carpinus fangiana HOM05D007548 ORTHO05D009527 1.5e-41 174.1 283 45.2
TWI39G0023 Tripterygium wilfordii HOM05D007548 ORTHO05D009527 1.3e-40 171.0 290 42.4
COL.COLO4_14190 Corchorus olitorius HOM05D007548 ORTHO05D009527 6.3e-40 168.7 222 46.8
Prupe.2G283000 Prunus persica HOM05D007548 ORTHO05D009527 1.6e-38 164.1 288 43.8
CANSAT80G1542 Cannabis sativa HOM05D007548 ORTHO05D009527 5.0e-37 159.1 263 45.2
FvH4_7g28270 Fragaria vesca HOM05D007548 ORTHO05D009527 3.2e-36 156.4 278 40.6
FAN06G3028 Fragaria x ananassa HOM05D007548 ORTHO05D009527 3.2e-36 156.4 278 40.6
FAN06G3476 Fragaria x ananassa HOM05D007548 ORTHO05D009527 3.2e-36 156.4 278 40.6
Gorai.008G283300 Gossypium raimondii HOM05D007548 ORTHO05D009527 9.4e-36 154.8 274 41.2
Gohir.A12G263800 Gossypium hirsutum HOM05D007548 ORTHO05D009527 4.7e-35 152.5 283 39.9
RcHm_v2.0_Chr1g0375221 Rosa chinensis HOM05D007548 ORTHO05D009527 2.3e-34 150.2 272 41.2
FAN03G2953 Fragaria x ananassa HOM05D007548 ORTHO05D009527 5.2e-34 149.1 272 40.8
FAN03G1824 Fragaria x ananassa HOM05D007548 ORTHO05D009527 1.2e-33 147.9 278 39.6
TAR636G2044 Trochodendron aralioides HOM05D007548 ORTHO05D009527 6.3e-32 142.1 275 39.6
Eucgr.K00142 Eucalyptus grandis HOM05D007548 ORTHO05D009527 4.1e-31 139.4 285 40.0
FAN01G2764 Fragaria x ananassa HOM05D007548 ORTHO05D009527 1.2e-30 137.9 283 37.8
Rhsim03G0172300 Rhododendron simsii HOM05D007548 ORTHO05D009527 1.6e-30 137.5 268 39.2
Peaxi162Scf00192g00096 Petunia axillaris HOM05D007548 ORTHO05D009527 1.7e-29 134.0 287 40.4
Lj5g0018367 Lotus japonicus HOM05D007548 ORTHO05D009527 3.3e-28 129.8 272 41.5
SalBow4G1498 Salvia bowleyana HOM05D007548 ORTHO05D009527 7.2e-28 128.6 277 36.1
SalBow4G2379 Salvia bowleyana HOM05D007548 ORTHO05D009527 4.7e-27 125.9 275 34.9
Nitab4.5_0008495g0030 Nicotiana tabacum HOM05D007548 ORTHO05D009527 5.2e-26 122.5 282 37.6
Glyma.20G151700 Glycine max HOM05D007548 ORTHO05D009527 8.9e-26 121.7 267 39.0
Medtr1g102510 Medicago truncatula HOM05D007548 ORTHO05D009527 8.9e-26 121.7 259 36.3
Oeu021733.1 Olea europaea HOM05D007548 ORTHO05D009527 8.9e-26 121.7 271 37.3
Glyma.10G242400 Glycine max HOM05D007548 ORTHO05D009527 1.2e-25 121.3 262 37.8
Oeu021734.1 Olea europaea HOM05D007548 ORTHO05D009527 2.0e-25 120.6 271 36.9
Cc02_g03840 Coffea canephora HOM05D007548 ORTHO05D009527 2.6e-25 120.2 281 37.7
DCAR_018129 Daucus carota HOM05D007548 ORTHO05D009527 7.5e-25 118.6 284 38.0
VMungo0720G2396 Vigna mungo HOM05D007548 ORTHO05D009527 9.8e-25 118.2 267 36.0
Actinidia13550 Actinidia chinensis HOM05D007548 ORTHO05D009527 6.3e-24 115.5 273 34.8
Cpa.g.sc13.212 Carica papaya HOM05D007548 ORTHO05D009527 6.3e-24 115.5 274 36.9
Nitab4.5_0000072g0300 Nicotiana tabacum HOM05D007548 ORTHO05D009527 7.0e-23 112.1 286 35.7
Nn1g01184 Nelumbo nucifera HOM05D007548 ORTHO05D009527 4.5e-22 109.4 281 33.5
Dinv07997 Davidia involucrata HOM05D007548 ORTHO05D009527 1.0e-21 108.2 228 37.3
PGR142G1046 Punica granatum HOM05D007548 ORTHO05D009527 6.6e-21 105.5 266 38.0
Psat6g202320 Pisum sativum HOM05D007548 ORTHO05D009527 8.6e-21 105.1 264 34.1
MSTRG.27166 Avicennia marina HOM05D007548 ORTHO05D009527 1.1e-20 104.8 277 36.8
Migut.F00422 Erythranthe guttata HOM05D007548 ORTHO05D009527 1.1e-20 104.8 289 33.6
Phvul.007G063100 Phaseolus vulgaris HOM05D007548 ORTHO05D009527 3.3e-20 103.2 264 33.3
Lj8A35G80 Lonicera japonica HOM05D007548 ORTHO05D009527 4.0e-18 96.3 291 34.4
Aa31LG3G8110 Aethionema arabicum HOM05D007548 ORTHO05D009527 6.8e-18 95.5 341 32.8
Actinidia25043 Actinidia chinensis HOM05D007548 ORTHO05D009527 5.8e-17 92.4 272 31.6
Solyc03g007080.4 Solanum lycopersicum HOM05D007548 ORTHO05D009527 1.3e-16 91.3 228 40.8
Sopen03g003070 Solanum pennellii HOM05D007548 ORTHO05D009527 1.3e-16 91.3 289 34.3
arahy.Tifrunner.gnm1.ann1.WA56KQ Arachis hypogaea HOM05D001870 ORTHO05D001797 4.9e-16 89.4 261 33.3
arahy.Tifrunner.gnm1.ann1.J4U887 Arachis hypogaea HOM05D001870 ORTHO05D001797 8.3e-16 88.6 261 33.0
SGA_v2.0_scaffold2G01130 Striga asiatica HOM05D007548 ORTHO05D009527 4.1e-15 86.3 265 31.7
Aqoxy7G00579 Aquilegia oxysepala HOM05D007548 ORTHO05D009527 5.4e-15 85.9 311 28.6
Nn4g26440 Nelumbo nucifera HOM05D007548 ORTHO05D009527 2.0e-14 84.0 292 29.1
GSVIVG01018495001 Vitis vinifera HOM05D007548 ORTHO05D009527 6.0e-14 82.4 128 47.7
FAN10G1395 Fragaria x ananassa HOM05D007548 ORTHO05D009527 3.9e-13 79.7 211 32.2
AL8G25930 Arabidopsis lyrata HOM05D007548 ORTHO05D009527 6.6e-13 79.0 303 33.0
AUR62035044 Chenopodium quinoa HOM05D007548 ORTHO05D009527 8.6e-13 78.6 290 31.0
Lalb_Chr21g0304861 Lupinus albus HOM05D007548 ORTHO05D009527 1.9e-12 77.4 267 31.8
THA.LOC104798720 Tarenaya hassleriana HOM05D007548 ORTHO05D009527 3.3e-12 76.6 288 33.0
Thhalv10014011m.g Eutrema salsugineum HOM05D007548 ORTHO05D009527 7.3e-12 75.5 316 31.0
PGSC0003DMG400031012 Solanum tuberosum HOM05D007548 ORTHO05D009527 7.3e-12 75.5 290 31.4
Carub.0008s1170 Capsella rubella HOM05D007548 ORTHO05D009527 9.5e-12 75.1 302 33.1
AUR62016096 Chenopodium quinoa HOM05D007548 ORTHO05D009527 1.6e-11 74.3 277 30.7
AT5G51680 Arabidopsis thaliana HOM05D007548 ORTHO05D009527 3.6e-11 73.2 303 30.7
PSO782G0883 Papaver somniferum HOM05D007548 ORTHO05D009527 3.6e-11 73.2 320 28.8
PSO478G0091 Papaver somniferum HOM05D007548 ORTHO05D009527 8.0e-11 72.0 282 30.5
CARHR264530 Cardamine hirsuta HOM05D007548 ORTHO05D009527 1.4e-10 71.2 302 30.5
EL10Ac3g05788 Beta vulgaris HOM05D007548 ORTHO05D009527 5.2e-10 69.3 282 28.7
BcaB05g23992 Brassica carinata HOM05D007548 ORTHO05D009527 1.5e-09 67.8 80 45.0
Ah.07g208330 Amaranthus hybridus HOM05D007548 ORTHO05D009527 2.6e-09 67.0 278 30.6
BcaC03g14581 Brassica carinata HOM05D007548 ORTHO05D009527 1.3e-08 64.7 80 42.5
BraA02t06280Z Brassica rapa HOM05D007548 ORTHO05D009527 1.7e-08 64.3 80 42.5
TPR.G26079 Trifolium pratense HOM05D007548 ORTHO05D009527 1.7e-08 64.3 259 26.3
HanXRQChr05g0141371 Helianthus annuus HOM05D007548 ORTHO05D009527 8.3e-08 62.0 280 28.6
arahy.Tifrunner.gnm1.ann1.1QTB59 Arachis hypogaea HOM05D007548 ORTHO05D009527 2.1e-06 57.4 222 32.0
BcaC04g20644 Brassica carinata HOM05D007548 ORTHO05D009527 2.1e-06 57.4 302 28.5
C09p41110 Brassica napus HOM05D007548 ORTHO05D009527 2.1e-06 57.4 302 28.5
BolC9t56989H Brassica oleracea HOM05D007548 ORTHO05D009527 2.1e-06 57.4 302 28.5
SGA_v2.0_scaffold486G52377 Striga asiatica HOM05D007548 ORTHO05D009527 2.1e-06 57.4 255 27.1
unitig_37.g12505 Utricularia gibba HOM05D007548 ORTHO05D009527 4.6e-06 56.2 266 26.3


User provided reference genes

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