Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.14G030600 Manihot esculenta HOM05D006286 ORTHO05D007741 6.3e-143 510.8 257 100.0
Thecc.03G167300 Theobroma cacao HOM05D006286 ORTHO05D007741 8.3e-111 404.1 244 81.1
Sabra15G0147300 Salix brachista HOM05D006286 ORTHO05D007741 1.4e-110 403.3 239 82.8
Prupe.2G287700 Prunus persica HOM05D006286 ORTHO05D007741 2.0e-109 399.4 244 82.4
FAN10G3629 Fragaria x ananassa HOM05D006286 ORTHO05D007741 3.5e-109 398.7 244 79.9
TWI39G0272 Tripterygium wilfordii HOM05D006286 ORTHO05D007741 3.5e-109 398.7 244 82.4
Potri.015G135300 Populus trichocarpa HOM05D006286 ORTHO05D007741 5.9e-109 397.9 238 82.4
RcHm_v2.0_Chr1g0376301 Rosa chinensis HOM05D006286 ORTHO05D007741 1.7e-108 396.4 244 79.1
Haze_13788 Corylus avellana HOM05D006286 ORTHO05D007741 2.2e-108 396.0 239 82.0
Atru.chr1.554 Acer truncatum HOM05D006286 ORTHO05D007741 2.9e-108 395.6 244 80.3
FvH4_7g28750 Fragaria vesca HOM05D006286 ORTHO05D007741 2.9e-108 395.6 244 79.1
CiPaw.03G100700 Carya illinoinensis HOM05D006286 ORTHO05D007741 6.5e-108 394.4 238 81.5
FAN06G1618 Fragaria x ananassa HOM05D006286 ORTHO05D007741 6.5e-108 394.4 244 78.7
FAN03G0223 Fragaria x ananassa HOM05D006286 ORTHO05D007741 1.1e-107 393.7 248 78.6
GSVIVG01018444001 Vitis vinifera HOM05D006286 ORTHO05D007741 1.9e-107 392.9 244 80.3
FAN03G0937 Fragaria x ananassa HOM05D006286 ORTHO05D007741 5.5e-107 391.3 248 78.2
FAN01G0056 Fragaria x ananassa HOM05D006286 ORTHO05D007741 1.6e-106 389.8 256 76.2
MELO3C006861.2 Cucumis melo HOM05D006286 ORTHO05D007741 2.7e-106 389.0 245 79.2
FAN06G4550 Fragaria x ananassa HOM05D006286 ORTHO05D007741 2.7e-106 389.0 244 78.3
arahy.Tifrunner.gnm1.ann1.MQ4KH5 Arachis hypogaea HOM05D006286 ORTHO05D007741 3.6e-106 388.7 240 78.3
Ciclev10005723m.g Citrus clementina HOM05D006286 ORTHO05D007741 3.6e-106 388.7 245 78.8
Cfa008258 Carpinus fangiana HOM05D006286 ORTHO05D007741 4.7e-106 388.3 258 77.1
QL09p015278 Quercus lobata HOM05D006286 ORTHO05D007741 6.1e-106 387.9 241 79.7
MD01G1193900 Malus domestica HOM05D006286 ORTHO05D007741 1.0e-105 387.1 241 80.9
Duzib084G1364 Durio zibethinus HOM05D006286 ORTHO05D007741 1.4e-105 386.7 244 78.3
ClCG05G007720 Citrullus lanatus HOM05D006286 ORTHO05D007741 2.3e-105 386.0 244 78.7
CsaV3_3G016660 Cucumis sativus L. HOM05D006286 ORTHO05D007741 6.8e-105 384.4 245 78.8
Lj5g0022226 Lotus japonicus HOM05D006286 ORTHO05D007741 5.7e-104 381.3 242 78.1
CSS0046699 Camellia sinensis var. sinensis HOM05D006286 ORTHO05D007741 9.8e-104 380.6 237 79.3
Rhsim03G0175100 Rhododendron simsii HOM05D006286 ORTHO05D007741 2.8e-103 379.0 237 79.3
Nn1g01303 Nelumbo nucifera HOM05D006286 ORTHO05D007741 1.8e-102 376.3 227 79.7
Eucgr.A02845 Eucalyptus grandis HOM05D006286 ORTHO05D007741 4.1e-102 375.2 250 74.8
Cpa.g.sc4.205 Carica papaya HOM05D006286 ORTHO05D007741 7.0e-102 374.4 239 78.2
Glyma.10G240400 Glycine max HOM05D006286 ORTHO05D007741 9.2e-102 374.0 247 74.9
Gohir.A09G179500 Gossypium hirsutum HOM05D006286 ORTHO05D007741 2.0e-101 372.9 234 77.4
Cc02_g03560 Coffea canephora HOM05D006286 ORTHO05D007741 4.5e-101 371.7 237 75.5
Phvul.007G065700 Phaseolus vulgaris HOM05D006286 ORTHO05D007741 7.7e-101 370.9 250 74.8
Gorai.006G196900 Gossypium raimondii HOM05D006286 ORTHO05D007741 1.0e-100 370.5 234 76.5
Sed0023063 Sechium edule HOM05D006286 ORTHO05D007741 1.0e-100 370.5 244 75.4
Ca_10810_v3 Cicer arietinum L. HOM05D006286 ORTHO05D007741 3.8e-100 368.6 247 74.5
Lsat_1_v5_gn_2_130220 Lactuca sativa HOM05D006286 ORTHO05D007741 8.6e-100 367.5 244 75.0
Lalb_Chr06g0160901 Lupinus albus HOM05D006286 ORTHO05D007741 1.1e-99 367.1 225 79.1
TAR629G0337 Trochodendron aralioides HOM05D006286 ORTHO05D007741 2.5e-99 365.9 228 76.8
CANSAT25G1059 Cannabis sativa HOM05D006286 ORTHO05D007741 3.3e-99 365.5 243 74.5
Gorai.013G064300 Gossypium raimondii HOM05D006286 ORTHO05D007741 1.2e-98 363.6 247 73.3
Oeu047963.2 Olea europaea HOM05D006286 ORTHO05D007741 1.6e-98 363.2 241 75.5
Sopen03g002810 Solanum pennellii HOM05D006286 ORTHO05D007741 1.6e-98 363.2 237 74.7
Peaxi162Scf00192g00519 Petunia axillaris HOM05D006286 ORTHO05D007741 2.1e-98 362.8 238 76.5
Solyc03g006820.3 Solanum lycopersicum HOM05D006286 ORTHO05D007741 3.6e-98 362.1 237 74.3
HanXRQChr14g0461801 Helianthus annuus HOM05D006286 ORTHO05D007741 4.7e-98 361.7 239 74.1
Nitab4.5_0004911g0020 Nicotiana tabacum HOM05D006286 ORTHO05D007741 4.7e-98 361.7 234 74.8
TPR.G17410 Trifolium pratense HOM05D006286 ORTHO05D007741 6.1e-98 361.3 250 72.0
Gohir.D13G056900 Gossypium hirsutum HOM05D006286 ORTHO05D007741 8.0e-98 360.9 247 72.9
DCAR_018141 Daucus carota HOM05D006286 ORTHO05D007741 1.0e-97 360.5 237 73.4
PSO782G2014 Papaver somniferum HOM05D006286 ORTHO05D007741 2.3e-97 359.4 257 70.8
Actinidia25052 Actinidia chinensis HOM05D006286 ORTHO05D007741 8.9e-97 357.5 234 76.1
CAN.G1097.8 Capsicum annuum HOM05D006286 ORTHO05D007741 1.2e-96 357.1 240 73.8
Gohir.A13G064700 Gossypium hirsutum HOM05D006286 ORTHO05D007741 2.6e-96 355.9 247 72.5
PSO478G4977 Papaver somniferum HOM05D006286 ORTHO05D007741 3.4e-96 355.5 242 73.1
VMungo0720G2540 Vigna mungo HOM05D006286 ORTHO05D007741 5.7e-96 354.8 230 75.7
Ah.13g067810 Amaranthus hybridus HOM05D006286 ORTHO05D007741 9.8e-96 354.0 218 79.8
PGSC0003DMG400024248 Solanum tuberosum HOM05D006286 ORTHO05D007741 1.3e-95 353.6 239 73.6
PSO782G5477 Papaver somniferum HOM05D006286 ORTHO05D007741 2.2e-95 352.8 239 73.6
Dinv28504 Davidia involucrata HOM05D006286 ORTHO05D007741 2.9e-95 352.4 306 61.4
SGA_v2.0_scaffold113G31783 Striga asiatica HOM05D006286 ORTHO05D007741 2.9e-95 352.4 238 73.1
Psat6g201680 Pisum sativum HOM05D006286 ORTHO05D007741 6.4e-95 351.3 237 73.4
Rhsim09G0195200 Rhododendron simsii HOM05D006286 ORTHO05D007741 3.2e-94 349.0 234 72.6
AUR62021266 Chenopodium quinoa HOM05D006286 ORTHO05D007741 4.1e-94 348.6 218 78.0
ECA238G1566 Erigeron canadensis HOM05D006286 ORTHO05D007741 7.8e-93 344.4 236 70.8
EL10Ac3g05740 Beta vulgaris HOM05D006286 ORTHO05D007741 1.0e-92 344.0 218 77.5
Aqoxy7G00487 Aquilegia oxysepala HOM05D006286 ORTHO05D007741 2.3e-92 342.8 241 71.8
Migut.F00396 Erythranthe guttata HOM05D006286 ORTHO05D007741 1.1e-91 340.5 241 70.5
vmacro09869 Vaccinium macrocarpon HOM05D006286 ORTHO05D007741 1.1e-91 340.5 234 72.2
THA.LOC104825086 Tarenaya hassleriana HOM05D006286 ORTHO05D007741 4.3e-91 338.6 244 70.9
Sc13g0008250 Simmondsia chinensis HOM05D006286 ORTHO05D007741 5.6e-91 338.2 234 71.4
Thhalv10014484m.g Eutrema salsugineum HOM05D006286 ORTHO05D007741 9.5e-91 337.4 241 71.0
Aa31sc908G10 Aethionema arabicum HOM05D006286 ORTHO05D007741 2.8e-90 335.9 240 70.4
Lj8A31T63 Lonicera japonica HOM05D006286 ORTHO05D007741 3.6e-90 335.5 199 81.9
Actinidia14215 Actinidia chinensis HOM05D006286 ORTHO05D007741 1.0e-89 334.0 248 70.2
MSTRG.8433 Avicennia marina HOM05D006286 ORTHO05D007741 1.4e-89 333.6 287 59.9
Sp6g14140 Schrenkiella parvula HOM05D006286 ORTHO05D007741 1.4e-89 333.6 229 74.2
Carub.0008s1192 Capsella rubella HOM05D006286 ORTHO05D007741 2.3e-89 332.8 227 73.1
arahy.Tifrunner.gnm1.ann1.TWGE9F Arachis hypogaea HOM05D006286 ORTHO05D007741 6.8e-89 331.3 210 75.7
AT5G51880 Arabidopsis thaliana HOM05D006286 ORTHO05D007741 1.2e-88 330.5 232 72.0
C09p41380 Brassica napus HOM05D006286 ORTHO05D007741 2.6e-88 329.3 241 70.5
BolC9t57014H Brassica oleracea HOM05D006286 ORTHO05D007741 2.6e-88 329.3 241 70.5
Nitab4.5_0000832g0010 Nicotiana tabacum HOM05D006286 ORTHO05D007741 2.6e-88 329.3 195 80.5
BcaC04g20627 Brassica carinata HOM05D006286 ORTHO05D007741 3.4e-88 328.9 233 71.7
A10p09720 Brassica napus HOM05D006286 ORTHO05D007741 9.8e-88 327.4 243 69.1
BraA10t43052Z Brassica rapa HOM05D006286 ORTHO05D007741 9.8e-88 327.4 243 69.1
AL8G26180 Arabidopsis lyrata HOM05D006286 ORTHO05D007741 8.3e-87 324.3 227 71.8
BcaB08g35541 Brassica carinata HOM05D006286 ORTHO05D007741 2.4e-86 322.8 233 69.5
AUR62016058 Chenopodium quinoa HOM05D006286 ORTHO05D007741 2.4e-86 322.8 195 79.5
Hund04686 Selenicereus undatus HOM05D006286 ORTHO05D007741 2.4e-86 322.8 229 71.2
PGR042G3452 Punica granatum HOM05D006286 ORTHO05D007741 3.2e-86 322.4 195 80.0
ATR0757G128 Amborella trichopoda HOM05D006286 ORTHO05D007741 4.6e-85 318.5 229 66.4
Os03g0119000 Oryza sativa ssp. japonica HOM05D006286 ORTHO05D007741 8.6e-84 314.3 218 70.2
unitig_37.g11947 Utricularia gibba HOM05D006286 ORTHO05D007741 1.9e-83 313.2 239 64.9
vmacro06741 Vaccinium macrocarpon HOM05D006286 ORTHO05D007741 5.2e-81 305.1 206 72.3
SalBow2G2245 Salvia bowleyana HOM05D006286 ORTHO05D007741 3.4e-80 302.4 240 63.8
HPP92_003528 Vanilla planifolia HOM05D006286 ORTHO05D007741 1.3e-79 300.4 242 63.2
COL.COLO4_14231 Corchorus olitorius HOM05D006286 ORTHO05D007741 8.3e-79 297.7 187 75.4
CARHR264790 Cardamine hirsuta HOM05D006286 ORTHO05D007741 1.2e-77 293.9 201 73.6
Potri.012G133100 Populus trichocarpa HOM05D006286 ORTHO05D007741 1.2e-74 283.9 267 61.0
Glyma.20G154300 Glycine max HOM05D006286 ORTHO05D007741 5.2e-73 278.5 205 69.3
CDE12G0688 Ceratophyllum demersum HOM05D006286 ORTHO05D007741 6.8e-73 278.1 213 63.4
CiPaw.15G075500 Carya illinoinensis HOM05D006286 ORTHO05D007741 4.9e-71 271.9 202 67.3
MBI12_g36686_MAGBIO Magnolia biondii HOM05D006286 ORTHO05D007741 4.1e-70 268.9 188 70.2
Mapoly0028s0137 Marchantia polymorpha HOM05D006286 ORTHO05D007741 3.8e-63 245.7 250 51.2
Gohir.D09G174800 Gossypium hirsutum HOM05D006286 ORTHO05D007741 8.4e-63 244.6 142 81.0
SMO139G0115 Selaginella moellendorffii HOM05D006286 ORTHO05D007741 8.4e-63 244.6 220 53.2
Zm00001eb001360 Zea mays HOM05D006286 ORTHO05D007741 2.5e-59 233.0 193 61.1
AagrBONN_evm.TU.Sc2ySwM_368.2699 Anthoceros agrestis HOM05D006286 ORTHO05D007741 2.1e-58 229.9 237 53.2
Medtr1g101840 Medicago truncatula HOM05D006286 ORTHO05D007741 3.1e-57 226.1 141 78.0
SEGI_34239 Sequoiadendron giganteum HOM05D006286 ORTHO05D007741 5.8e-56 221.9 185 59.5
Pp3c22_4190 Physcomitrium patens HOM05D006286 ORTHO05D007741 2.2e-55 219.9 264 49.2
Actinidia03097 Actinidia chinensis HOM05D006286 ORTHO05D007741 2.5e-51 206.5 138 72.5
SHI13825 Sapria himalayana HOM05D000350 ORTHO05D000228 2.8e-34 149.8 184 44.6
Actinidia13543 Actinidia chinensis HOM05D006286 ORTHO05D007741 4.2e-30 136.0 92 73.9
MCO04G355 Micromonas commoda HOM05D006286 ORTHO05D007741 1.4e-25 120.9 208 36.5
Cfa025685 Carpinus fangiana HOM05D006286 ORTHO05D007741 1.3e-23 114.4 279 32.6
PRCOL_00006636 Prasinoderma coloniale HOM05D006286 ORTHO05D007741 3.2e-22 109.8 212 36.8
Cre14.g619900 Chlamydomonas reinhardtii HOM05D006286 ORTHO05D007741 5.5e-22 109.0 202 35.1
RcHm_v2.0_Chr1g0376261 Rosa chinensis HOM05D006286 ORTHO05D007741 2.9e-15 86.7 47 78.7
FvH4_2g14060 Fragaria vesca HOM05D006286 ORTHO05D007741 5.5e-14 82.4 61 60.7
Ah.14g078790 Amaranthus hybridus HOM05D006286 ORTHO05D007741 1.6e-13 80.9 49 77.6
SEGI_15131 Sequoiadendron giganteum HOM05D006286 ORTHO05D007741 4.5e-08 62.8 34 79.4
MCO03G036 Micromonas commoda HOM05D037152 ORTHO05D034124 6.5e-07 58.9 265 25.3


User provided reference genes

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