Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.14G026900 Manihot esculenta HOM05D015019 ORTHO05D013840 1.7e-44 182.2 86 100.0
Thecc.03G175100 Theobroma cacao HOM05D015019 ORTHO05D013840 6.1e-18 94.0 81 58.0
Potri.012G138100 Populus trichocarpa HOM05D015019 ORTHO05D013840 4.0e-17 91.3 89 52.8
Potri.015G139900 Populus trichocarpa HOM05D015019 ORTHO05D013840 2.0e-16 89.0 82 56.1
Manes.06G146200 Manihot esculenta HOM05D015019 ORTHO05D013840 1.7e-15 85.9 87 59.8
COL.COLO4_14294 Corchorus olitorius HOM05D015019 ORTHO05D013840 1.4e-14 82.8 74 56.8
Gohir.A09G180600 Gossypium hirsutum HOM05D015019 ORTHO05D013840 2.5e-11 72.0 80 46.2
Gohir.D09G175500 Gossypium hirsutum HOM05D015019 ORTHO05D013840 4.2e-11 71.2 81 46.9
Gorai.006G197600 Gossypium raimondii HOM05D015019 ORTHO05D013840 4.2e-11 71.2 81 46.9
CSS0030299 Camellia sinensis var. sinensis HOM05D012645 ORTHO05D010731 7.2e-11 70.5 87 41.4
Thecc.03G175000 Theobroma cacao HOM05D012645 ORTHO05D011500 2.1e-10 68.9 83 49.4
Manes.06G146100 Manihot esculenta HOM05D012645 ORTHO05D011500 8.0e-10 67.0 88 43.2
Sabra15G0150700 Salix brachista HOM05D015019 ORTHO05D011500 3.0e-09 65.1 74 47.3
CiPaw.04G065000 Carya illinoinensis HOM05D018452 ORTHO05D013840 4.0e-09 64.7 85 47.1
Manes.02G024700 Manihot esculenta HOM05D008852 ORTHO05D010731 5.2e-09 64.3 77 46.8
Hma1.2p1_0514F.1_g169790 Hydrangea macrophylla HOM05D008852 ORTHO05D010731 2.0e-08 62.4 86 39.5
Hma1.2p1_3255F.1_g334555 Hydrangea macrophylla HOM05D008852 ORTHO05D010731 2.0e-08 62.4 86 39.5
CiPaw.04G065300 Carya illinoinensis HOM05D012645 ORTHO05D011500 4.4e-08 61.2 82 46.3
Thecc.03G275000 Theobroma cacao HOM05D008852 ORTHO05D010731 4.4e-08 61.2 81 44.4
Rhsim03G0179400 Rhododendron simsii HOM05D019148 ORTHO05D019092 7.5e-08 60.5 86 37.2
Glyma.09G140400 Glycine max HOM05D018452 ORTHO05D013840 9.8e-08 60.1 83 41.0
Potri.001G107400 Populus trichocarpa HOM05D008852 ORTHO05D010731 9.8e-08 60.1 73 43.8
Phvul.004G117600 Phaseolus vulgaris HOM05D018452 ORTHO05D013840 1.3e-07 59.7 83 39.8
Dinv35204 Davidia involucrata HOM05D061900 ORTHO05D019092 1.7e-07 59.3 64 42.2
Glyma.16G194300 Glycine max HOM05D018452 ORTHO05D013840 2.8e-07 58.5 83 41.0
Manes.14G027000 Manihot esculenta HOM05D012645 ORTHO05D011500 1.4e-06 56.2 88 35.2
Ciclev10023081m.g Citrus clementina HOM05D008852 ORTHO05D010731 4.1e-06 54.7 85 42.4
Gohir.A01G118366 Gossypium hirsutum HOM05D012645 ORTHO05D011500 5.4e-06 54.3 77 42.9
Gohir.A08G100200 Gossypium hirsutum HOM05D012645 ORTHO05D011500 5.4e-06 54.3 77 42.9
Lalb_Chr03g0034451 Lupinus albus HOM05D018452 ORTHO05D013840 5.4e-06 54.3 84 38.1
CiPaw.11G138500 Carya illinoinensis HOM05D008852 ORTHO05D010731 7.0e-06 53.9 79 44.3
Nn1g01419 Nelumbo nucifera HOM05D008852 ORTHO05D010731 7.0e-06 53.9 88 39.8
Potri.012G138200 Populus trichocarpa HOM05D010814 ORTHO05D011500 7.0e-06 53.9 88 37.5
Potri.015G139966 Populus trichocarpa HOM05D010814 ORTHO05D011500 7.0e-06 53.9 88 38.6


User provided reference genes

Program Settings